Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 2.5e-147 525.4 257 100.0
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 2.8e-135 485.3 257 90.7
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 2.6e-133 478.8 257 91.4
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 2.6e-133 478.8 257 89.9
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 3.4e-133 478.4 257 90.3
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 7.7e-133 477.2 257 89.1
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 2.2e-132 475.7 257 89.5
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 5.0e-132 474.6 257 89.5
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 1.9e-131 472.6 254 90.2
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 2.5e-131 472.2 257 89.5
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 4.2e-131 471.5 257 88.7
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 4.2e-131 471.5 256 90.2
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 1.2e-130 469.9 256 87.1
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 1.6e-130 469.5 257 86.4
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.1e-130 469.2 257 87.5
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 3.6e-130 468.4 257 86.8
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 4.7e-130 468.0 257 89.5
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 4.7e-130 468.0 257 87.2
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 7.9e-130 467.2 257 88.7
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 1.0e-129 466.8 254 89.0
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 1.4e-129 466.5 257 89.5
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 1.4e-129 466.5 257 89.5
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 2.3e-129 465.7 257 87.2
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 2.3e-129 465.7 257 87.2
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 3.0e-129 465.3 258 88.8
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 3.9e-129 464.9 257 89.1
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 5.2e-129 464.5 257 87.2
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 5.2e-129 464.5 257 86.4
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 5.2e-129 464.5 257 86.4
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 8.8e-129 463.8 257 87.9
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 8.8e-129 463.8 256 88.7
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 2.0e-128 462.6 256 88.3
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.6e-128 462.2 256 85.9
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.6e-128 462.2 256 85.9
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 2.6e-128 462.2 256 87.5
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 3.3e-128 461.8 257 87.5
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 3.3e-128 461.8 257 87.5
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 3.3e-128 461.8 257 87.5
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 3.3e-128 461.8 257 87.5
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 3.3e-128 461.8 257 87.5
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 4.4e-128 461.5 255 87.1
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.3e-127 459.9 257 87.2
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.3e-127 459.9 257 87.2
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 1.7e-127 459.5 257 85.2
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 1.7e-127 459.5 255 87.1
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 1.7e-127 459.5 257 86.8
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 2.2e-127 459.1 254 84.6
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 2.2e-127 459.1 257 87.2
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 2.8e-127 458.8 257 87.2
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 6.3e-127 457.6 257 87.2
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 8.2e-127 457.2 257 87.2
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 8.2e-127 457.2 257 87.2
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 8.2e-127 457.2 257 87.2
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 1.4e-126 456.4 256 86.7
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 1.8e-126 456.1 257 86.4
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 1.8e-126 456.1 257 86.8
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 4.1e-126 454.9 257 86.4
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 5.3e-126 454.5 257 84.8
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 5.3e-126 454.5 257 86.0
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 1.2e-125 453.4 257 86.4
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.2e-125 453.4 257 86.4
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.2e-125 453.4 257 86.4
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.6e-125 453.0 257 86.4
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 2.0e-125 452.6 257 85.6
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 2.0e-125 452.6 265 83.4
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 5.9e-125 451.1 257 85.6
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 5.9e-125 451.1 257 85.6
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 1.7e-124 449.5 257 82.5
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 2.9e-124 448.7 257 85.2
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 2.9e-124 448.7 258 85.7
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 3.8e-124 448.4 257 83.7
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 1.5e-123 446.4 257 83.3
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 2.5e-123 445.7 257 84.0
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 5.5e-123 444.5 257 84.8
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 1.2e-122 443.4 257 82.9
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 1.2e-122 443.4 257 84.8
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 1.6e-122 443.0 257 81.7
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.1e-122 442.6 257 84.0
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 2.1e-122 442.6 257 83.7
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 2.1e-122 442.6 302 73.2
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 4.7e-122 441.4 263 82.5
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 6.1e-122 441.0 258 82.9
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.3e-121 439.1 257 83.3
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 3.3e-120 435.3 257 80.5
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 6.3e-119 431.0 271 77.1
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 4.1e-118 428.3 271 76.8
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 3.5e-117 425.2 230 89.1
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 8.5e-116 420.6 257 82.9
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.5e-115 419.9 255 78.8
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 4.2e-115 418.3 257 77.8
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 2.7e-114 415.6 257 79.8
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 3.0e-113 412.1 214 89.7
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 5.2e-113 411.4 253 78.7
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 7.5e-112 407.5 257 76.3
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 8.3e-111 404.1 254 77.2
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 1.2e-109 400.2 250 77.2
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.0e-109 399.4 281 73.3
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 4.5e-109 398.3 257 79.0
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 1.2e-104 383.6 214 84.6
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.5e-104 383.3 223 82.5
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 9.2e-102 374.0 257 75.1
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 2.7e-101 372.5 231 77.1
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 9.2e-94 347.4 256 67.2
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 4.6e-93 345.1 251 66.9
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 1.3e-92 343.6 247 68.0
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 1.5e-91 340.1 262 64.9
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 2.5e-91 339.3 250 66.8
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.1e-90 336.3 198 82.8
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 3.2e-86 322.4 198 77.8
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 1.7e-76 290.0 153 90.2
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 8.6e-76 287.7 170 78.8
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 5.6e-75 285.0 159 85.5
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 1.2e-66 257.3 142 85.9
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 7.6e-64 248.1 132 90.2
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 1.3e-60 237.3 254 49.6
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 3.9e-60 235.7 248 48.4
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 4.3e-59 232.3 198 63.1
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 1.2e-56 224.2 155 74.2
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 9.6e-51 204.5 112 89.3
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 6.2e-50 201.8 116 80.2
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 6.2e-50 201.8 272 40.4
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 1.1e-49 201.1 114 85.1
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 1.8e-49 200.3 156 64.7
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 9.0e-49 198.0 105 90.5
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 7.1e-46 188.3 257 44.7
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 3.0e-44 183.0 105 85.7
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 4.3e-43 179.1 105 83.8
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 2.4e-41 173.3 104 82.7
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.2e-40 171.0 105 79.0
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 9.3e-38 161.4 117 68.4
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 5.9e-32 142.1 91 71.4
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.8e-28 130.6 102 63.7
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 5.7e-27 125.6 79 81.0
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.4e-22 110.9 96 60.4
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 5.5e-22 109.0 60 88.3
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 6.3e-18 95.5 55 81.8
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 6.7e-12 75.5 60 66.7
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 4.5e-08 62.8 40 75.0


User provided reference genes

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