Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 1.1e-138 496.5 235 100.0
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 5.0e-46 188.7 146 67.8
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 2.1e-44 183.3 146 66.4
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 6.1e-44 181.8 147 62.6
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 2.3e-43 179.9 158 58.2
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 5.2e-43 178.7 148 61.5
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 5.2e-43 178.7 111 75.7
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 6.7e-43 178.3 176 52.8
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 6.7e-43 178.3 149 63.1
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 6.7e-43 178.3 149 63.1
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 3.3e-42 176.0 146 64.4
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 3.3e-42 176.0 117 70.9
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 4.4e-42 175.6 176 52.8
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 5.7e-42 175.3 147 63.9
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.3e-41 174.1 96 83.3
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.3e-41 174.1 151 60.9
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.3e-41 174.1 107 75.7
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 2.2e-41 173.3 123 65.9
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 2.8e-41 172.9 148 59.5
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.8e-41 172.9 117 70.9
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 4.8e-41 172.2 138 62.3
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 1.8e-40 170.2 153 57.5
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 1.8e-40 170.2 119 71.4
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 1.8e-40 170.2 177 50.8
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 2.4e-40 169.9 118 71.2
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 4.1e-40 169.1 127 66.9
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 4.1e-40 169.1 148 60.1
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 5.3e-40 168.7 121 71.9
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 9.1e-40 167.9 146 61.0
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 1.2e-39 167.5 155 59.4
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.2e-39 167.5 111 72.1
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 1.2e-39 167.5 142 59.2
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 1.2e-39 167.5 107 71.0
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.0e-39 166.8 146 58.2
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 2.7e-39 166.4 122 68.9
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 2.7e-39 166.4 112 71.4
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 3.5e-39 166.0 146 58.2
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 4.5e-39 165.6 146 57.5
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 5.9e-39 165.2 112 70.5
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 5.9e-39 165.2 149 57.0
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 7.7e-39 164.9 112 75.0
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 2.9e-38 162.9 148 55.4
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.9e-38 162.9 113 70.8
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 2.9e-38 162.9 115 67.8
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 5.0e-38 162.2 100 75.0
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 5.0e-38 162.2 122 63.9
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 5.0e-38 162.2 179 49.2
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 6.5e-38 161.8 120 64.2
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 6.5e-38 161.8 126 64.3
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 8.5e-38 161.4 152 56.6
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.1e-37 161.0 123 65.9
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.1e-37 161.0 145 55.9
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.9e-37 160.2 151 54.3
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 2.5e-37 159.8 118 68.6
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 2.5e-37 159.8 115 67.0
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 3.2e-37 159.5 126 65.1
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 3.2e-37 159.5 175 50.9
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 4.2e-37 159.1 112 65.2
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 4.2e-37 159.1 141 58.9
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 5.5e-37 158.7 92 76.1
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 5.5e-37 158.7 170 50.0
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 7.2e-37 158.3 147 55.1
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 9.4e-37 157.9 145 53.8
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 9.4e-37 157.9 177 46.9
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.2e-36 157.5 148 54.1
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 1.6e-36 157.1 110 68.2
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.6e-36 157.1 145 55.2
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 2.1e-36 156.8 115 68.7
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 2.1e-36 156.8 148 54.1
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 3.6e-36 156.0 83 78.3
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 6.1e-36 155.2 83 77.1
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 8.0e-36 154.8 155 55.5
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 8.0e-36 154.8 155 55.5
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 1.8e-35 153.7 113 64.6
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 3.0e-35 152.9 176 48.9
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 3.0e-35 152.9 116 60.3
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 4.0e-35 152.5 116 60.3
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 6.8e-35 151.8 121 62.8
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 6.8e-35 151.8 141 57.4
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 8.8e-35 151.4 111 65.8
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 3.4e-34 149.4 123 62.6
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 3.4e-34 149.4 144 54.2
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 5.7e-34 148.7 131 59.5
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 5.7e-34 148.7 123 62.6
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 5.7e-34 148.7 114 65.8
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 7.5e-34 148.3 92 72.8
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 7.5e-34 148.3 131 59.5
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 7.5e-34 148.3 149 46.3
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 7.5e-34 148.3 162 48.1
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 9.8e-34 147.9 110 65.5
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 9.8e-34 147.9 110 65.5
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 1.3e-33 147.5 131 58.8
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 1.7e-33 147.1 120 61.7
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 1.7e-33 147.1 103 68.9
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 1.7e-33 147.1 131 58.8
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.7e-33 147.1 125 57.6
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 2.2e-33 146.7 130 56.9
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 2.2e-33 146.7 117 63.2
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 2.2e-33 146.7 172 47.7
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 6.3e-33 145.2 159 51.6
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 6.3e-33 145.2 159 51.6
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 1.1e-32 144.4 114 61.4
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 1.4e-32 144.1 159 51.6
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 1.8e-32 143.7 141 54.6
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.8e-32 143.7 172 46.5
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 3.1e-32 142.9 141 53.9
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 4.1e-32 142.5 90 72.2
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 7.0e-32 141.7 123 59.3
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 9.1e-32 141.4 100 69.0
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 2.0e-31 140.2 110 65.5
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 7.7e-31 138.3 111 58.6
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 1.3e-30 137.5 113 60.2
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 1.7e-30 137.1 118 56.8
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 1.5e-26 124.0 103 57.3
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 2.6e-26 123.2 82 69.5
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 5.7e-26 122.1 103 55.3
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 4.9e-25 119.0 82 64.6
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.8e-24 117.1 87 58.6
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.8e-24 117.1 87 58.6
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 3.1e-24 116.3 144 47.9
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 7.0e-24 115.2 84 60.7
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.5e-23 112.5 79 62.0
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 4.3e-21 105.9 87 57.5
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.0e-18 97.1 87 51.7
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 6.4e-17 92.0 105 43.8
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 1.1e-13 81.3 60 65.0
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 1.9e-13 80.5 128 34.4
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 5.6e-13 79.0 73 53.4
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 1.2e-12 77.8 45 71.1
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.3e-09 67.8 111 33.3
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 2.3e-06 57.0 83 30.1


User provided reference genes

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