Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 1.5e-101 372.9 188 100.0
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 3.7e-76 288.5 186 74.7
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 4.8e-76 288.1 186 74.7
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 4.8e-76 288.1 186 74.7
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 6.3e-76 287.7 188 73.9
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 1.4e-75 286.6 189 75.1
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 2.4e-75 285.8 194 74.2
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 2.4e-75 285.8 188 73.9
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 4.1e-75 285.0 188 73.9
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 9.1e-75 283.9 188 73.9
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 1.2e-74 283.5 193 71.5
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 1.6e-74 283.1 188 72.3
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 2.0e-74 282.7 186 73.1
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 2.7e-74 282.3 188 72.9
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 2.7e-74 282.3 188 70.7
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 7.7e-74 280.8 186 73.1
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 1.0e-73 280.4 186 72.0
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 1.7e-73 279.6 188 70.2
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 1.7e-73 279.6 197 70.6
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.7e-73 279.6 186 71.5
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 2.2e-73 279.3 186 71.5
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 2.9e-73 278.9 186 71.0
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 5.0e-73 278.1 188 71.3
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 6.5e-73 277.7 187 75.4
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 6.5e-73 277.7 188 72.9
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 8.5e-73 277.3 187 71.1
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 8.5e-73 277.3 182 73.6
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.1e-72 276.9 188 72.3
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 1.5e-72 276.6 193 71.5
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 1.9e-72 276.2 187 73.3
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.5e-72 275.8 188 69.1
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 4.2e-72 275.0 188 71.3
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 4.2e-72 275.0 188 71.3
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 7.2e-72 274.2 186 69.9
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 1.2e-71 273.5 183 71.6
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 1.6e-71 273.1 189 70.4
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 1.6e-71 273.1 194 70.6
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 2.1e-71 272.7 188 69.1
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 2.1e-71 272.7 188 70.7
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 2.7e-71 272.3 185 73.5
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 3.6e-71 271.9 186 69.4
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 6.1e-71 271.2 188 71.8
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 6.1e-71 271.2 188 69.7
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 1.0e-70 270.4 188 71.8
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.0e-70 270.4 191 71.2
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 1.0e-70 270.4 191 68.6
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 1.0e-70 270.4 192 67.2
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 1.4e-70 270.0 188 67.6
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.8e-70 269.6 191 71.2
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.8e-70 269.6 187 70.1
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 1.8e-70 269.6 188 69.1
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 2.3e-70 269.2 197 67.0
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 2.3e-70 269.2 198 65.2
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 2.3e-70 269.2 186 67.7
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 3.0e-70 268.9 185 73.0
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 3.0e-70 268.9 185 73.0
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 3.0e-70 268.9 190 72.1
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 4.0e-70 268.5 185 73.0
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 6.8e-70 267.7 190 67.4
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 8.8e-70 267.3 198 64.6
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 1.5e-69 266.5 184 69.0
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 2.0e-69 266.2 190 71.1
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 3.4e-69 265.4 194 67.0
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 5.7e-69 264.6 201 64.7
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 5.7e-69 264.6 200 64.0
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 5.7e-69 264.6 184 71.2
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 7.5e-69 264.2 192 65.6
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.1e-67 258.8 193 66.3
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 3.1e-67 258.8 186 66.1
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 7.0e-67 257.7 186 66.7
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 3.5e-66 255.4 186 67.7
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 5.9e-66 254.6 178 69.1
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 7.7e-66 254.2 192 67.7
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 7.7e-66 254.2 192 67.7
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 5.0e-65 251.5 182 64.3
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 6.5e-65 251.1 187 64.7
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 8.6e-65 250.8 190 65.3
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.1e-64 250.4 186 64.0
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 1.9e-64 249.6 180 66.1
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 5.5e-64 248.1 184 64.1
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 7.2e-64 247.7 188 64.4
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.1e-63 246.1 202 64.4
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 4.7e-63 245.0 188 64.4
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 1.0e-62 243.8 184 62.0
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.4e-62 243.4 216 60.6
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.0e-61 239.6 184 63.6
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 1.7e-60 236.5 189 61.9
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 2.4e-59 232.6 260 49.6
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.3e-56 222.2 155 71.0
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 1.6e-55 219.9 134 76.1
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 4.4e-53 211.8 164 64.6
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 5.7e-53 211.5 154 67.5
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 7.5e-53 211.1 155 71.0
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 7.5e-53 211.1 153 66.7
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.7e-52 209.9 159 69.2
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 2.2e-52 209.5 181 61.3
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 2.2e-52 209.5 157 68.2
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 6.4e-52 208.0 182 55.5
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 3.2e-51 205.7 177 55.9
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 2.7e-50 202.6 188 58.0
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 5.0e-49 198.4 185 53.0
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 1.9e-48 196.4 149 64.4
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 8.0e-47 191.0 153 62.7
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 4.9e-44 181.8 170 55.9
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 3.2e-43 179.1 137 63.5
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 4.3e-40 168.7 190 49.5
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 5.6e-40 168.3 186 49.5
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.6e-34 150.2 132 60.6
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.3e-33 146.4 190 42.1
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 1.4e-30 137.1 182 43.4
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 4.0e-30 135.6 182 40.7
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 7.6e-29 131.3 80 77.5
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 8.4e-28 127.9 187 42.2
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 1.3e-17 94.0 56 78.6


User provided reference genes

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