Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.86 Carica papaya HOM05D004436 ORTHO05D005179 7.5e-248 860.1 458 100.0
Aa31LG8G1130 Aethionema arabicum HOM05D004436 ORTHO05D005179 2.5e-134 483.0 460 56.1
THA.LOC104804933 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 2.0e-131 473.4 409 59.4
CiPaw.01G221800 Carya illinoinensis HOM05D004436 ORTHO05D005179 7.5e-131 471.5 414 59.9
Thecc.03G227200 Theobroma cacao HOM05D004436 ORTHO05D005179 1.7e-130 470.3 417 58.0
CiPaw.05G181900 Carya illinoinensis HOM05D004436 ORTHO05D005179 1.1e-129 467.6 414 60.1
Duzib205G0267 Durio zibethinus HOM05D004436 ORTHO05D005179 4.1e-129 465.7 419 58.2
Eucgr.F03167 Eucalyptus grandis HOM05D004436 ORTHO05D005179 6.6e-127 458.4 416 57.7
Thhalv10020760m.g Eutrema salsugineum HOM05D004436 ORTHO05D005179 7.3e-126 454.9 456 54.8
COL.COLO4_30482 Corchorus olitorius HOM05D004436 ORTHO05D005179 8.9e-124 448.0 419 58.0
GSVIVG01016817001 Vitis vinifera HOM05D004436 ORTHO05D005179 4.4e-123 445.7 410 58.0
PGR119G1065 Punica granatum HOM05D004436 ORTHO05D005179 1.1e-121 441.0 417 56.1
Sp3g12180 Schrenkiella parvula HOM05D004436 ORTHO05D005179 2.4e-121 439.9 461 51.0
Manes.04G142200 Manihot esculenta HOM05D004436 ORTHO05D005179 2.7e-120 436.4 416 56.5
Carub.0003s1351 Capsella rubella HOM05D004436 ORTHO05D005179 4.6e-120 435.6 449 50.3
MELO3C024372.2 Cucumis melo HOM05D004436 ORTHO05D005179 1.3e-119 434.1 414 54.8
Manes.11G023100 Manihot esculenta HOM05D004436 ORTHO05D005179 2.3e-119 433.3 422 55.7
CsaV3_7G034640 Cucumis sativus L. HOM05D004436 ORTHO05D005179 3.0e-119 433.0 412 54.9
Dinv03512 Davidia involucrata HOM05D004436 ORTHO05D005179 5.0e-119 432.2 409 55.0
Gohir.A03G000500 Gossypium hirsutum HOM05D004436 ORTHO05D005179 1.1e-118 431.0 416 55.3
Gorai.003G182300 Gossypium raimondii HOM05D004436 ORTHO05D005179 3.3e-118 429.5 416 55.0
TAR375G0086 Trochodendron aralioides HOM05D004436 ORTHO05D005179 4.3e-118 429.1 417 54.0
ClCG09G000840 Citrullus lanatus HOM05D004436 ORTHO05D005179 5.6e-118 428.7 414 53.9
Gohir.D03G171700 Gossypium hirsutum HOM05D004436 ORTHO05D005179 9.5e-118 427.9 416 54.8
CARHR088750 Cardamine hirsuta HOM05D004436 ORTHO05D005179 1.2e-117 427.6 412 51.0
Ciclev10025597m.g Citrus clementina HOM05D004436 ORTHO05D005179 6.2e-117 425.2 418 54.1
Actinidia32167 Actinidia chinensis HOM05D004436 ORTHO05D005179 8.1e-117 424.9 419 53.0
Dinv30366 Davidia involucrata HOM05D004436 ORTHO05D005179 5.2e-116 422.2 359 59.6
Sed0007780 Sechium edule HOM05D004436 ORTHO05D005179 8.9e-116 421.4 415 53.7
AL3G26120 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 1.5e-115 420.6 453 47.5
Haze_15997 Corylus avellana HOM05D004436 ORTHO05D005179 2.0e-115 420.2 447 50.8
Sed0020704 Sechium edule HOM05D004436 ORTHO05D005179 1.7e-114 417.2 413 54.7
CSS0015890 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 2.2e-114 416.8 417 53.7
TWI23G0436 Tripterygium wilfordii HOM05D004436 ORTHO05D005179 3.7e-114 416.0 418 52.9
Potri.001G198600 Populus trichocarpa HOM05D004436 ORTHO05D005179 4.9e-114 415.6 432 52.8
Sopen06g018390 Solanum pennellii HOM05D004436 ORTHO05D005179 3.2e-113 412.9 411 54.7
PGSC0003DMG400016304 Solanum tuberosum HOM05D004436 ORTHO05D005179 7.1e-113 411.8 411 54.3
Solyc06g053330.4 Solanum lycopersicum HOM05D004436 ORTHO05D005179 2.1e-112 410.2 411 54.3
Lj5A40G74 Lonicera japonica HOM05D004436 ORTHO05D005179 7.8e-112 408.3 417 52.3
AT3G13940 Arabidopsis thaliana HOM05D004436 ORTHO05D005179 1.7e-111 407.1 457 46.4
COL.COLO4_17027 Corchorus olitorius HOM05D004436 ORTHO05D005179 8.6e-111 404.8 350 60.0
Prupe.3G044800 Prunus persica HOM05D004436 ORTHO05D005179 8.6e-111 404.8 450 50.7
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla HOM05D004436 ORTHO05D005179 2.5e-110 403.3 416 51.9
BcaB04g20967 Brassica carinata HOM05D004436 ORTHO05D005179 3.3e-110 402.9 458 52.2
Glyma.15G165300 Glycine max HOM05D004436 ORTHO05D005179 3.3e-110 402.9 406 53.0
Atru.chr1.3808 Acer truncatum HOM05D004436 ORTHO05D005179 5.6e-110 402.1 386 55.2
Rhsim08G0236100 Rhododendron simsii HOM05D004436 ORTHO05D005179 7.3e-110 401.7 417 51.8
vmacro22224 Vaccinium macrocarpon HOM05D004436 ORTHO05D005179 7.3e-110 401.7 415 54.2
Lj6g0016044 Lotus japonicus HOM05D004436 ORTHO05D005179 9.5e-110 401.4 456 47.4
Nitab4.5_0000035g0090 Nicotiana tabacum HOM05D004436 ORTHO05D005179 1.2e-109 401.0 414 53.9
RcHm_v2.0_Chr2g0144531 Rosa chinensis HOM05D004436 ORTHO05D005179 1.6e-109 400.6 419 51.6
CSS0033207 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 1.8e-108 397.1 417 52.3
CAN.G540.4 Capsicum annuum HOM05D004436 ORTHO05D005179 2.4e-108 396.7 411 52.8
Oeu044709.1 Olea europaea HOM05D004436 ORTHO05D005179 2.4e-108 396.7 419 49.4
BraA01t04010Z Brassica rapa HOM05D004436 ORTHO05D005179 5.2e-108 395.6 450 49.1
FAN02G3564 Fragaria x ananassa HOM05D004436 ORTHO05D005179 5.2e-108 395.6 417 51.6
BcaC09g48383 Brassica carinata HOM05D004436 ORTHO05D005179 6.8e-108 395.2 450 49.3
A01p39710 Brassica napus HOM05D004436 ORTHO05D005179 6.8e-108 395.2 450 49.8
C01p50660 Brassica napus HOM05D004436 ORTHO05D005179 6.8e-108 395.2 450 49.3
BolC1t05015H Brassica oleracea HOM05D004436 ORTHO05D005179 6.8e-108 395.2 450 49.3
FAN09G2135 Fragaria x ananassa HOM05D004436 ORTHO05D005179 6.8e-108 395.2 417 51.1
MD09G1187900 Malus domestica HOM05D004436 ORTHO05D005179 8.9e-108 394.8 414 50.0
FAN05G5343 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.2e-107 394.4 417 50.8
FvH4_6g34180 Fragaria vesca HOM05D004436 ORTHO05D005179 4.4e-107 392.5 417 51.1
Sabra01G0155800 Salix brachista HOM05D004436 ORTHO05D005179 5.8e-107 392.1 433 50.1
Lsat_1_v5_gn_5_135221 Lactuca sativa HOM05D004436 ORTHO05D005179 3.8e-106 389.4 420 52.4
Peaxi162Scf00943g00014 Petunia axillaris HOM05D004436 ORTHO05D005179 1.1e-105 387.9 417 49.6
Oeu047041.1 Olea europaea HOM05D004436 ORTHO05D005179 9.2e-105 384.8 405 50.6
MSTRG.22562 Avicennia marina HOM05D004436 ORTHO05D005179 2.7e-104 383.3 422 50.0
Peaxi162Scf00647g00219 Petunia axillaris HOM05D004436 ORTHO05D005179 4.6e-104 382.5 414 49.3
arahy.Tifrunner.gnm1.ann1.4RDH3B Arachis hypogaea HOM05D004436 ORTHO05D005179 1.0e-103 381.3 418 49.5
Nitab4.5_0012713g0010 Nicotiana tabacum HOM05D004436 ORTHO05D005179 1.7e-103 380.6 415 51.6
FAN14G2695 Fragaria x ananassa HOM05D004436 ORTHO05D005179 5.1e-103 379.0 453 47.7
CANSAT56G1493 Cannabis sativa HOM05D004436 ORTHO05D005179 1.1e-102 377.9 411 50.4
arahy.Tifrunner.gnm1.ann1.0TY6IG Arachis hypogaea HOM05D004436 ORTHO05D005179 1.9e-102 377.1 418 49.0
Sc12g0010440 Simmondsia chinensis HOM05D004436 ORTHO05D005179 2.5e-102 376.7 417 48.9
HanXRQChr10g0312341 Helianthus annuus HOM05D004436 ORTHO05D005179 5.6e-102 375.6 413 49.9
Lalb_Chr08g0233321 Lupinus albus HOM05D004436 ORTHO05D005179 5.6e-102 375.6 450 46.4
Ca_02096_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 8.1e-101 371.7 410 48.3
Cc04_g01610 Coffea canephora HOM05D004436 ORTHO05D005179 8.1e-101 371.7 317 60.3
FAN26G0630 Fragaria x ananassa HOM05D004436 ORTHO05D005179 8.1e-101 371.7 450 46.4
QL05p009436 Quercus lobata HOM05D004436 ORTHO05D005179 1.8e-100 370.5 663 38.3
Medtr7g104810 Medicago truncatula HOM05D004436 ORTHO05D005179 7.6e-99 365.2 445 49.0
Medtr2g037880 Medicago truncatula HOM05D004436 ORTHO05D005179 9.9e-99 364.8 443 45.8
ECA234G4408 Erigeron canadensis HOM05D004436 ORTHO05D005179 1.3e-98 364.4 409 50.1
Phvul.009G236700 Phaseolus vulgaris HOM05D004436 ORTHO05D005179 1.3e-98 364.4 409 49.4
DCAR_026403 Daucus carota HOM05D004436 ORTHO05D005179 2.4e-97 360.1 414 45.9
SGA_v2.0_scaffold68G22895 Striga asiatica HOM05D004436 ORTHO05D005179 3.2e-97 359.8 411 46.0
Psat1g144000 Pisum sativum HOM05D004436 ORTHO05D005179 5.4e-97 359.0 408 46.8
Migut.D00948 Erythranthe guttata HOM05D004436 ORTHO05D005179 6.6e-95 352.1 421 46.1
RcHm_v2.0_Chr2g0166351 Rosa chinensis HOM05D004436 ORTHO05D005179 1.9e-94 350.5 410 46.8
Aqoxy2G00706 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 2.5e-94 350.1 415 44.1
Hund20819 Selenicereus undatus HOM05D004436 ORTHO05D005179 2.5e-94 350.1 417 47.2
TPR.G13789 Trifolium pratense HOM05D004436 ORTHO05D005179 1.5e-91 340.9 416 46.4
FvH4_6g47280 Fragaria vesca HOM05D004436 ORTHO05D005179 2.0e-91 340.5 419 45.3
Medtr2g037460 Medicago truncatula HOM05D004436 ORTHO05D005179 4.5e-91 339.3 421 46.3
Rhsim10G0150900 Rhododendron simsii HOM05D004436 ORTHO05D005179 5.8e-91 339.0 492 42.9
CDE07G0038 Ceratophyllum demersum HOM05D004436 ORTHO05D005179 7.1e-89 332.0 436 43.3
EL10Ac7g16378 Beta vulgaris HOM05D004436 ORTHO05D005179 4.0e-84 316.2 418 44.0
EL10Ac7g16380 Beta vulgaris HOM05D004436 ORTHO05D005179 1.3e-82 311.2 418 42.3
Peaxi162Scf00060g02815 Petunia axillaris HOM05D004436 ORTHO05D005179 1.3e-82 311.2 416 43.5
PSO135G0558 Papaver somniferum HOM05D004436 ORTHO05D005179 4.9e-82 309.3 422 42.4
Actinidia21779 Actinidia chinensis HOM05D004436 ORTHO05D005179 1.1e-81 308.1 418 44.5
PSO724G1089 Papaver somniferum HOM05D004436 ORTHO05D005179 1.1e-81 308.1 422 42.2
Ah.07g197300 Amaranthus hybridus HOM05D004436 ORTHO05D005179 7.9e-80 302.0 414 42.0
AUR62009860 Chenopodium quinoa HOM05D004436 ORTHO05D005179 5.1e-79 299.3 417 40.0
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 1.9e-78 297.4 419 40.8
AUR62001510 Chenopodium quinoa HOM05D004436 ORTHO05D005179 9.0e-76 288.5 443 37.7
MD17G1172300 Malus domestica HOM05D004436 ORTHO05D005179 1.5e-75 287.7 332 44.9
Nn6g35749 Nelumbo nucifera HOM05D004436 ORTHO05D005179 8.4e-74 282.0 417 41.5
Nitab4.5_0004287g0020 Nicotiana tabacum HOM05D004436 ORTHO05D005179 2.5e-70 270.4 415 42.9
Lj6g0018808 Lotus japonicus HOM05D004436 ORTHO05D005179 2.8e-69 266.9 245 54.7
ATR0762G049 Amborella trichopoda HOM05D004436 ORTHO05D005179 1.1e-68 265.0 456 37.5
HPP92_009424 Vanilla planifolia HOM05D004436 ORTHO05D005179 5.9e-67 259.2 423 39.7
THA.LOC104822769 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 1.0e-66 258.5 245 56.7
FAN24G2018 Fragaria x ananassa HOM05D004436 ORTHO05D005179 8.5e-66 255.4 402 39.6
FvH4_2g14600 Fragaria vesca HOM05D004436 ORTHO05D005179 1.1e-65 255.0 297 47.5
Carub.0003s3547 Capsella rubella HOM05D004436 ORTHO05D005179 2.5e-62 243.8 362 39.8
TPR.G16505 Trifolium pratense HOM05D004436 ORTHO05D005179 7.7e-59 232.3 216 52.8
Ca_27339_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 1.9e-57 227.6 300 44.0
Zm00001eb166800 Zea mays HOM05D004436 ORTHO05D005179 3.9e-55 219.9 413 35.8
Os11g0615100 Oryza sativa ssp. japonica HOM05D004436 ORTHO05D005179 5.5e-49 199.5 431 33.4
Ah.08g216510 Amaranthus hybridus HOM05D004436 ORTHO05D005179 7.2e-49 199.1 311 40.2
Pp3c8_24340 Physcomitrium patens HOM05D004436 ORTHO05D005179 1.5e-46 191.4 444 32.2
AagrBONN_evm.TU.Sc2ySwM_368.2707 Anthoceros agrestis HOM05D004436 ORTHO05D005179 3.1e-44 183.7 459 29.6
DCAR_023423 Daucus carota HOM05D004436 ORTHO05D005179 1.3e-42 178.3 235 40.4
FAN14G5104 Fragaria x ananassa HOM05D002326 ORTHO05D005179 1.1e-41 175.3 231 42.9
SEGI_28110 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 1.9e-41 174.5 323 38.7
SEGI_22335 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 3.2e-41 173.7 294 39.8
FAN27G1625 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.2e-40 171.8 388 32.7
Aqoxy7G00272 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 9.7e-38 162.2 237 39.2
Aqoxy2G02914 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 2.2e-34 151.0 138 55.8
THA.LOC104822775 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 5.0e-34 149.8 165 51.5
CBR_g45967 Chara braunii HOM05D004436 ORTHO05D005179 1.0e-31 142.1 452 26.5
Oeu004353.1 Olea europaea HOM05D004436 ORTHO05D005179 1.2e-30 138.7 110 57.3
FAN02G4131 Fragaria x ananassa HOM05D002326 ORTHO05D005179 3.4e-30 137.1 423 29.3
FAN09G3702 Fragaria x ananassa HOM05D002326 ORTHO05D005179 4.4e-30 136.7 422 29.4
FAN20G3048 Fragaria x ananassa HOM05D004436 ORTHO05D005179 5.7e-30 136.3 246 36.6
Mapoly0063s0055 Marchantia polymorpha HOM05D004436 ORTHO05D005179 7.5e-30 136.0 332 29.2
Haze_06394 Corylus avellana HOM05D004436 ORTHO05D005179 3.1e-28 130.6 319 32.0
FAN15G1241 Fragaria x ananassa HOM05D004436 ORTHO05D005179 5.9e-27 126.3 408 28.4
AUR62000997 Chenopodium quinoa HOM05D004436 ORTHO05D005179 2.8e-24 117.5 209 35.9
ATR0185G001 Amborella trichopoda HOM05D004436 ORTHO05D005179 1.2e-22 112.1 177 38.4
PGSC0003DMG400002436 Solanum tuberosum HOM05D004436 ORTHO05D005179 2.6e-22 110.9 92 59.8
Aqoxy2G02915 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 3.4e-22 110.5 142 43.7
Dinv21190 Davidia involucrata HOM05D004436 ORTHO05D005179 4.4e-22 110.2 108 51.9
AL1G64440 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 7.5e-22 109.4 156 39.1
TPR.G16496 Trifolium pratense HOM05D004436 ORTHO05D005179 4.5e-19 100.1 172 32.6
SEGI_36774 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 1.4e-12 78.6 135 34.8
Psat6g077080 Pisum sativum HOM05D001891 ORTHO05D005832 1.9e-12 78.2 123 39.0
Psat6g077120 Pisum sativum HOM05D001891 ORTHO05D005832 1.9e-12 78.2 123 39.0
Peaxi162Scf01131g00007 Petunia axillaris HOM05D004436 ORTHO05D005179 1.6e-11 75.1 131 36.6
Oeu027301.1 Olea europaea HOM05D004436 ORTHO05D005179 6.0e-11 73.2 144 36.1
SMO144G0124 Selaginella moellendorffii HOM05D004436 ORTHO05D005179 2.5e-09 67.8 107 34.6
PSO017G0055 Papaver somniferum HOM05D004436 ORTHO05D005179 2.1e-08 64.7 119 35.3
ATR0589G117 Amborella trichopoda HOM05D004436 ORTHO05D005179 1.2e-06 58.9 87 39.1


User provided reference genes

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