Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.8 Carica papaya HOM05D002451 ORTHO05D005601 0.0e+00 1134.0 572 100.0
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 1.3e-132 477.6 510 51.4
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 2.9e-132 476.5 520 51.9
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 6.5e-132 475.3 520 51.3
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 6.5e-132 475.3 512 52.3
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 2.1e-130 470.3 514 51.6
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 3.6e-130 469.5 518 51.7
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 1.0e-129 468.0 515 50.7
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 3.9e-129 466.1 515 50.3
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 4.4e-128 462.6 509 49.5
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 1.8e-126 457.2 510 51.0
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 1.2e-125 454.5 512 51.0
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 1.2e-125 454.5 509 51.1
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 1.2e-125 454.5 512 50.8
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 2.0e-125 453.8 518 49.0
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 3.5e-125 453.0 515 48.3
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 4.5e-125 452.6 510 48.2
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 5.9e-125 452.2 509 51.1
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 2.2e-124 450.3 516 49.0
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 2.7e-122 443.4 521 47.8
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 1.1e-120 438.0 486 50.6
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 4.4e-120 436.0 496 51.2
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 2.6e-117 426.8 511 47.2
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.5e-115 420.2 516 45.9
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 3.2e-115 419.9 502 47.2
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 2.1e-114 417.2 511 46.4
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 2.1e-114 417.2 511 46.0
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 1.0e-113 414.8 510 46.1
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.8e-113 414.1 509 46.6
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 2.3e-113 413.7 506 44.7
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 3.0e-113 413.3 515 45.0
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 3.0e-113 413.3 514 44.9
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 1.2e-112 411.4 522 44.4
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 3.4e-112 409.8 510 45.5
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 2.4e-110 403.7 506 45.1
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 5.3e-110 402.5 530 44.9
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 1.2e-109 401.4 509 46.0
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 2.0e-109 400.6 521 44.7
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 4.5e-109 399.4 515 44.5
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 1.0e-108 398.3 508 44.7
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 1.3e-108 397.9 515 44.5
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 3.2e-107 393.3 518 44.0
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 4.2e-107 392.9 496 46.4
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 9.4e-107 391.7 518 44.2
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 1.2e-106 391.3 507 43.0
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 4.7e-106 389.4 505 44.8
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 6.1e-106 389.0 483 46.6
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 1.8e-105 387.5 489 47.0
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 5.7e-104 382.5 501 44.3
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 1.3e-103 381.3 508 42.5
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 2.2e-103 380.6 515 41.7
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 9.1e-102 375.2 502 43.8
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 1.7e-100 370.9 500 43.6
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 2.3e-100 370.5 515 41.2
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 5.0e-100 369.4 506 44.9
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 1.9e-99 367.5 500 43.4
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 3.3e-99 366.7 515 40.6
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 4.2e-99 366.3 550 40.9
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 2.1e-98 364.0 510 43.1
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 8.0e-98 362.1 502 43.2
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 1.0e-97 361.7 502 43.8
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 3.0e-97 360.1 502 43.8
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 3.0e-97 360.1 502 43.8
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 3.0e-97 360.1 507 43.2
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 4.0e-97 359.8 502 42.6
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 6.8e-97 359.0 514 40.7
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 1.5e-96 357.8 507 40.4
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 4.4e-96 356.3 512 40.4
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 1.3e-95 354.8 509 40.5
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 1.7e-95 354.4 502 42.4
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 2.8e-95 353.6 512 40.4
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 4.9e-95 352.8 504 40.1
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.4e-94 351.3 501 41.5
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 2.7e-93 347.1 517 39.1
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 4.5e-93 346.3 502 42.0
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 1.0e-92 345.1 523 38.4
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 2.8e-90 337.0 522 40.2
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 5.2e-89 332.8 517 42.7
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 3.4e-88 330.1 538 37.9
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 1.6e-85 321.2 510 39.6
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 3.9e-84 316.6 516 39.3
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 5.6e-83 312.8 502 38.6
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 2.8e-82 310.5 510 38.8
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 3.6e-82 310.1 501 38.5
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 6.2e-82 309.3 516 38.0
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 1.4e-81 308.1 517 38.7
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 1.2e-80 305.1 495 40.0
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 2.2e-79 300.8 505 36.8
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 4.9e-79 299.7 431 41.8
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 8.3e-79 298.9 550 35.1
CSS0036196 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 1.8e-73 281.2 318 48.1
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 1.1e-70 271.9 507 33.5
Aa31LG11G5130 Aethionema arabicum HOM05D002451 ORTHO05D005601 9.6e-67 258.8 318 45.9
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 2.1e-66 257.7 312 46.8
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 3.1e-65 253.8 510 32.2
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 5.2e-65 253.1 503 32.6
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 9.3e-62 242.3 505 32.9
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 3.6e-50 203.8 493 30.8
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 9.9e-48 195.7 541 29.9
CDE05G1834 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 1.8e-44 184.9 315 37.1
TAR624G0921 Trochodendron aralioides HOM05D002451 ORTHO05D005601 6.7e-36 156.4 215 43.3
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 6.7e-28 129.8 513 26.7
SHI11092 Sapria himalayana HOM05D002451 ORTHO05D005601 1.8e-20 105.1 127 44.9
Aa31sc1931G10 Aethionema arabicum HOM05D002451 ORTHO05D005601 3.0e-20 104.4 184 35.3
TAR624G0246 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.0e-19 101.7 99 48.5
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 7.4e-19 99.8 532 25.0
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 8.5e-15 86.3 125 43.2
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 1.1e-14 85.9 337 24.3
CSS0023144 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 4.2e-14 84.0 112 38.4
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 7.2e-14 83.2 234 30.3
HPP92_007804 Vanilla planifolia HOM05D002451 ORTHO05D005601 1.6e-13 82.0 121 38.8
CBR_g26190 Chara braunii HOM05D002451 ORTHO05D005601 8.8e-12 76.3 425 21.4
TAR624G0206 Trochodendron aralioides HOM05D002451 ORTHO05D005601 3.5e-08 64.3 64 50.0


User provided reference genes

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