Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.60 Carica papaya HOM05D003196 ORTHO05D003543 2.0e-37 159.1 112 100.0
Atru.chr1.3680 Acer truncatum HOM05D003196 ORTHO05D003543 3.1e-14 82.0 91 83.5
Thecc.06G109100 Theobroma cacao HOM05D003196 ORTHO05D003543 4.1e-14 81.6 90 64.4
Prupe.3G050800 Prunus persica HOM05D003196 ORTHO05D003543 7.0e-14 80.9 90 58.9
MD09G1194300 Malus domestica HOM05D003196 ORTHO05D003543 1.6e-13 79.7 90 65.6
Duzib235G0666 Durio zibethinus HOM05D003196 ORTHO05D003543 1.0e-12 77.0 90 68.9
TWI79G1769 Tripterygium wilfordii HOM05D003196 ORTHO05D003543 1.0e-12 77.0 93 75.3
Ciclev10026551m.g Citrus clementina HOM05D003196 ORTHO05D003543 2.2e-12 75.9 93 79.6
CANSAT56G4409 Cannabis sativa HOM05D003196 ORTHO05D003543 5.0e-12 74.7 90 73.3
Sed0023272 Sechium edule HOM05D003196 ORTHO05D003543 4.2e-11 71.6 92 54.3
ClCG09G000640 Citrullus lanatus HOM05D003196 ORTHO05D003543 9.4e-11 70.5 88 50.0
Duzib192G0676 Durio zibethinus HOM05D003196 ORTHO05D003543 9.4e-11 70.5 90 62.2
QL04p071305 Quercus lobata HOM05D003196 ORTHO05D003543 2.7e-10 68.9 91 58.2
Gohir.A10G060800 Gossypium hirsutum HOM05D003196 ORTHO05D003543 3.6e-10 68.6 90 55.6
Gohir.D10G061900 Gossypium hirsutum HOM05D003196 ORTHO05D003543 6.1e-10 67.8 90 54.4
Nn6g35461 Nelumbo nucifera HOM05D003196 ORTHO05D003543 6.1e-10 67.8 90 45.6
Manes.11G027100 Manihot esculenta HOM05D003196 ORTHO05D003543 1.0e-09 67.0 94 59.6
Haze_15943 Corylus avellana HOM05D003196 ORTHO05D003543 1.4e-09 66.6 91 79.1
TAR636G1648 Trochodendron aralioides HOM05D003196 ORTHO05D003543 1.4e-09 66.6 91 50.5
RcHm_v2.0_Chr2g0142911 Rosa chinensis HOM05D003196 ORTHO05D003543 1.8e-09 66.2 93 62.4
Lj5A46T61 Lonicera japonica HOM05D003196 ORTHO05D003543 4.0e-09 65.1 97 75.3
THA.LOC104810345 Tarenaya hassleriana HOM05D003196 ORTHO05D003543 5.2e-09 64.7 89 67.4
Aa31LG10G950 Aethionema arabicum HOM05D003196 ORTHO05D003543 6.8e-09 64.3 89 73.0
Aqoxy7G01222 Aquilegia oxysepala HOM05D003196 ORTHO05D003543 6.8e-09 64.3 87 65.5
MELO3C024395.2 Cucumis melo HOM05D003196 ORTHO05D003543 6.8e-09 64.3 86 70.9
CiPaw.02G140800 Carya illinoinensis HOM05D003196 ORTHO05D003543 8.8e-09 63.9 91 70.3
CsaV3_7G034840 Cucumis sativus L. HOM05D003196 ORTHO05D003543 2.0e-08 62.8 86 67.4
THA.LOC104822633 Tarenaya hassleriana HOM05D003196 ORTHO05D003543 2.0e-08 62.8 89 77.5
MBI01_g09953_MAGBIO Magnolia biondii HOM05D003196 ORTHO05D003543 2.6e-08 62.4 91 45.1
Lalb_Chr25g0280681 Lupinus albus HOM05D003196 ORTHO05D003543 3.4e-08 62.0 90 65.6
FvH4_6g33180 Fragaria vesca HOM05D003196 ORTHO05D003543 4.4e-08 61.6 90 62.2
FAN14G0807 Fragaria x ananassa HOM05D003196 ORTHO05D003543 4.4e-08 61.6 90 62.2
Hund18725 Selenicereus undatus HOM05D003196 ORTHO05D003543 4.4e-08 61.6 90 60.0
FAN05G4539 Fragaria x ananassa HOM05D003196 ORTHO05D003543 5.7e-08 61.2 90 61.1
GSVIVG01016846001 Vitis vinifera HOM05D003196 ORTHO05D003543 5.7e-08 61.2 88 50.0
Carub.0001s4366 Capsella rubella HOM05D003196 ORTHO05D003543 7.5e-08 60.8 89 71.9
Thhalv10011806m.g Eutrema salsugineum HOM05D003196 ORTHO05D003543 9.8e-08 60.5 91 65.9
Eucgr.F03128 Eucalyptus grandis HOM05D003196 ORTHO05D003543 6.3e-07 57.8 88 72.7
DCAR_016165 Daucus carota HOM05D003196 ORTHO05D003543 8.3e-07 57.4 88 55.7
AT1G55160 Arabidopsis thaliana HOM05D003196 ORTHO05D003543 1.1e-06 57.0 90 65.6
Phvul.010G139500 Phaseolus vulgaris HOM05D003196 ORTHO05D003543 1.1e-06 57.0 88 46.6
Sc15g0000110 Simmondsia chinensis HOM05D003196 ORTHO05D003543 1.4e-06 56.6 90 57.8
COL.COLO4_30652 Corchorus olitorius HOM05D000032 ORTHO05D002561 1.8e-06 56.2 73 71.2
AL1G63160 Arabidopsis lyrata HOM05D003196 ORTHO05D003543 2.4e-06 55.8 90 64.4
Lsat_1_v5_gn_5_134840 Lactuca sativa HOM05D003196 ORTHO05D003543 2.4e-06 55.8 89 74.2
Ca_23312_v3 Cicer arietinum L. HOM05D003196 ORTHO05D003543 3.1e-06 55.5 87 49.4
Glyma.08G193800 Glycine max HOM05D003196 ORTHO05D003543 3.1e-06 55.5 86 47.7
PGR102G0498 Punica granatum HOM05D003196 ORTHO05D003543 3.1e-06 55.5 92 54.3
TWI75G0934 Tripterygium wilfordii HOM05D003196 ORTHO05D003543 3.1e-06 55.5 94 62.8
Ah.15g094190 Amaranthus hybridus HOM05D003196 ORTHO05D003543 4.1e-06 55.1 91 39.6
CARHR044760 Cardamine hirsuta HOM05D003196 ORTHO05D003543 4.1e-06 55.1 89 68.5
Sp1g40820 Schrenkiella parvula HOM05D003196 ORTHO05D003543 4.1e-06 55.1 89 73.0
A05p17660 Brassica napus HOM05D003196 ORTHO05D003543 7.0e-06 54.3 89 40.4
BraA05t20658Z Brassica rapa HOM05D003196 ORTHO05D003543 7.0e-06 54.3 89 40.4
VMungo0331G0087 Vigna mungo HOM05D003196 ORTHO05D003543 7.0e-06 54.3 86 45.3
Glyma.07G010600 Glycine max HOM05D003196 ORTHO05D003543 9.1e-06 53.9 85 48.2


User provided reference genes

Program Settings