Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.54 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-47 193.0 92 100.0
Cpa.g.sc25.135 Carica papaya HOM05D000002 ORTHO05D000047 2.5e-41 171.8 91 87.9
Cpa.g.sc159.30 Carica papaya HOM05D000002 ORTHO05D000047 5.5e-41 170.6 91 87.9
Cpa.g.sc96.44 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-39 165.6 91 86.8
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-39 165.2 91 85.7
Cpa.g.sc130.28 Carica papaya HOM05D000002 ORTHO05D000047 8.8e-39 163.3 91 85.7
Cpa.g.sc3.387 Carica papaya HOM05D000002 ORTHO05D000047 8.8e-39 163.3 91 84.6
Cpa.g.sc301.6 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-38 162.9 91 84.6
Cpa.g.sc20.131 Carica papaya HOM05D004423 ORTHO05D000047 7.4e-38 160.2 91 83.5
Cpa.g.sc54.39 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-37 159.1 91 84.6
Cpa.g.sc98.51 Carica papaya HOM05D000002 ORTHO05D000047 4.8e-37 157.5 90 83.3
Cpa.g.sc1317.1 Carica papaya HOM05D000002 ORTHO05D000047 8.2e-37 156.8 86 86.0
Cpa.g.sc0.122 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-36 156.0 87 82.8
Cpa.g.sc159.29 Carica papaya HOM05D000002 ORTHO05D000047 7.7e-35 150.2 80 88.8
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 6.1e-32 140.6 80 81.2
Cpa.g.sc176.8 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-30 136.0 79 83.5
Cpa.g.sc28.127 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-30 136.0 91 69.2
Cpa.g.sc12.50 Carica papaya HOM05D000002 ORTHO05D000047 7.5e-30 133.7 80 77.5
Cpa.g.sc155.19 Carica papaya HOM05D000002 ORTHO05D000047 7.5e-30 133.7 91 68.1
Cpa.g.sc951.1 Carica papaya HOM05D000002 ORTHO05D000047 2.0e-27 125.6 81 76.5
Cpa.g.sc122.32 Carica papaya HOM05D000002 ORTHO05D000047 2.5e-25 118.6 88 62.5
Cpa.g.sc44.34 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-24 115.5 89 59.6
Cpa.g.sc36.35 Carica papaya HOM05D000002 ORTHO05D000047 5.2e-23 110.9 71 76.1
Cpa.g.sc425.2 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-22 109.8 69 79.7
Cpa.g.sc63.36 Carica papaya HOM05D000002 ORTHO05D000047 5.7e-22 107.5 91 57.1
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 4.8e-21 104.4 56 85.7
Cpa.g.sc72.7 Carica papaya HOM05D000002 ORTHO05D000047 4.8e-21 104.4 85 57.6
Cpa.g.sc82.52 Carica papaya HOM05D000002 ORTHO05D000047 8.3e-21 103.6 91 54.9
Cpa.g.sc10.112 Carica papaya HOM05D000002 ORTHO05D000047 5.4e-20 100.9 66 72.7
Cpa.g.sc97.54 Carica papaya HOM05D000002 ORTHO05D000047 7.0e-20 100.5 91 51.6
Cpa.g.sc135.31 Carica papaya HOM05D000002 ORTHO05D000047 2.0e-19 99.0 79 60.8
Cpa.g.sc608.3 Carica papaya HOM05D000002 ORTHO05D000047 2.0e-19 99.0 91 52.7
Cpa.g.sc39.115 Carica papaya HOM05D000002 ORTHO05D000047 3.5e-19 98.2 91 53.8
Cpa.g.sc89.20 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-18 95.5 90 48.9
Cpa.g.sc1639.1 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-18 95.1 82 56.1
Cpa.g.sc7.142 Carica papaya HOM05D000002 ORTHO05D000047 3.8e-18 94.7 62 69.4
Cpa.g.sc11.149 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-17 92.8 91 48.4
Cpa.g.sc33.192 Carica papaya HOM05D001633 ORTHO05D006978 1.5e-17 92.8 91 48.4
Cpa.g.sc49.88 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-17 92.4 88 51.1
Cpa.g.sc11.108 Carica papaya HOM05D000002 ORTHO05D000047 5.5e-17 90.9 60 63.3
Cpa.g.sc118.36 Carica papaya HOM05D000002 ORTHO05D000047 7.2e-17 90.5 91 48.4
Cpa.g.sc22.85 Carica papaya HOM05D000002 ORTHO05D000047 7.2e-17 90.5 91 47.3
Cpa.g.sc47.72 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-16 88.6 88 46.6
Cpa.g.sc35.42 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-16 88.2 90 44.4
Cpa.g.sc118.22 Carica papaya HOM05D000002 ORTHO05D000047 4.7e-16 87.8 91 47.3
Cpa.g.sc94.40 Carica papaya HOM05D000002 ORTHO05D000047 4.7e-16 87.8 75 56.0
Cpa.g.sc32.62 Carica papaya HOM05D000002 ORTHO05D000047 6.1e-16 87.4 92 46.7
Cpa.g.sc102.25 Carica papaya HOM05D007148 ORTHO05D009047 1.4e-15 86.3 83 49.4
Cpa.g.sc44.5 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-15 85.5 84 50.0
Cpa.g.sc91.67 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-15 85.5 91 50.5
Cpa.g.sc67.4 Carica papaya HOM05D000002 ORTHO05D000047 4.0e-15 84.7 88 47.7
Cpa.g.sc10.7 Carica papaya HOM05D000002 ORTHO05D000047 5.2e-15 84.3 92 44.6
Cpa.g.sc2.306 Carica papaya HOM05D000002 ORTHO05D000047 6.8e-15 84.0 84 51.2
Cpa.g.sc7.9 Carica papaya HOM05D000002 ORTHO05D000047 8.8e-15 83.6 89 46.1
Cpa.g.sc153.13 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-14 83.2 91 47.3
Cpa.g.sc34.27 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-14 83.2 80 50.0
Cpa.g.sc103.51 Carica papaya HOM05D000002 ORTHO05D000047 5.7e-14 80.9 87 46.0
Cpa.g.sc1889.1 Carica papaya HOM05D000002 ORTHO05D000047 7.5e-14 80.5 91 46.2
Cpa.g.sc91.54 Carica papaya HOM05D000002 ORTHO05D000047 7.5e-14 80.5 87 41.4
Cpa.g.sc94.33 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-13 79.7 87 44.8
Cpa.g.sc67.11 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-13 79.0 91 46.2
Cpa.g.sc96.23 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-13 79.0 91 46.2
Cpa.g.sc22.53 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-12 76.6 85 44.7
Cpa.g.sc84.39 Carica papaya HOM05D026937 ORTHO05D000047 5.4e-12 74.3 42 83.3
Cpa.g.sc118.38 Carica papaya HOM05D000190 ORTHO05D000113 1.2e-11 73.2 81 48.1
Cpa.g.sc7.140 Carica papaya HOM05D000002 ORTHO05D000047 3.5e-11 71.6 80 48.8
Cpa.g.sc284.12 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-10 69.7 88 42.0
Cpa.g.sc81.61 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-10 69.3 91 42.9
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.9e-10 68.6 60 46.7
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-09 66.6 57 47.4
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-09 66.6 57 47.4
Hma1.2p1_0668F.1_g199811 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-09 66.2 64 46.9
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 2.5e-09 65.5 84 36.9
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-09 65.5 89 39.3
Psat5g071680 Pisum sativum HOM05D000002 ORTHO05D000047 2.5e-09 65.5 69 42.0
Cpa.g.sc29.27 Carica papaya HOM05D000002 ORTHO05D000047 3.3e-09 65.1 76 46.1
Aqoxy7G01998 Aquilegia oxysepala HOM05D000002 ORTHO05D000047 4.3e-09 64.7 80 33.8
Cpa.g.sc11.47 Carica papaya HOM05D000002 ORTHO05D000047 4.3e-09 64.7 91 37.4
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 4.3e-09 64.7 88 37.5
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.6e-09 64.3 95 33.7
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.6e-09 64.3 64 46.9
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.6e-09 64.3 57 45.6
Lj1g0008265 Lotus japonicus HOM05D000002 ORTHO05D000047 5.6e-09 64.3 69 42.0
Lj3g0020805 Lotus japonicus HOM05D000002 ORTHO05D000047 7.3e-09 63.9 57 47.4
Oeu050509.1 Olea europaea HOM05D000002 ORTHO05D000047 7.3e-09 63.9 64 46.9
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.5e-09 63.5 97 37.1
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.5e-09 63.5 64 46.9
Hma1.2p1_0647F.1_g195010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.5e-09 63.5 60 48.3
Cpa.g.sc67.87 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-08 63.2 88 40.9
Lj1g0019835 Lotus japonicus HOM05D000002 ORTHO05D000047 1.6e-08 62.8 57 43.9
Psat0s3550g0080 Pisum sativum HOM05D000002 ORTHO05D000047 1.6e-08 62.8 90 36.7
CANSAT54G2266 Cannabis sativa HOM05D000002 ORTHO05D000047 2.1e-08 62.4 84 35.7
Cpa.g.sc67.75 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-08 62.0 56 53.6
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-08 62.0 64 45.3
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-08 62.0 95 33.7
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-08 61.6 57 43.9
Cpa.g.sc23.134 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-08 61.6 67 47.8
Hma1.2p1_1149F.1_g261730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-08 61.6 64 45.3
GSVIVG01029816001 Vitis vinifera HOM05D000168 ORTHO05D000047 3.6e-08 61.6 63 47.6
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 57 43.9
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 57 43.9
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 60 43.3
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 57 43.9
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 57 43.9
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 57 43.9
CSS0021536 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 57 43.9
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 57 43.9
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 57 43.9
CSS0036738 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 57 43.9
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-08 61.2 57 43.9
Cpa.g.sc166.3 Carica papaya HOM05D000002 ORTHO05D000047 4.7e-08 61.2 88 37.5
Cpa.g.sc73.41 Carica papaya HOM05D000002 ORTHO05D000047 4.7e-08 61.2 64 45.3
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-08 60.8 57 43.9
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-08 60.8 57 43.9
MELO3C029221.2 Cucumis melo HOM05D011088 ORTHO05D000047 8.0e-08 60.5 90 36.7
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.0e-08 60.5 57 45.6
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-07 60.1 57 43.9
TAR546G0002 Trochodendron aralioides HOM05D000002 ORTHO05D017724 1.0e-07 60.1 60 43.3
Cpa.g.c39297 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-07 59.7 69 40.6
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-07 59.7 57 47.4
Atru.chr11.3 Acer truncatum HOM05D000002 ORTHO05D000047 1.8e-07 59.3 61 44.3
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 59.3 57 47.4
Hma1.2p1_0026F.1_g016410 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 59.3 63 42.9
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-07 59.3 57 47.4
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-07 58.9 57 42.1
MELO3C008258.2 Cucumis melo HOM05D011088 ORTHO05D000047 2.3e-07 58.9 68 33.8
MELO3C035670.2 Cucumis melo HOM05D011088 ORTHO05D000047 2.3e-07 58.9 56 41.1
Cpa.g.sc332.6 Carica papaya HOM05D000002 ORTHO05D000047 4.0e-07 58.2 41 61.0
Eucgr.B01039 Eucalyptus grandis HOM05D000002 ORTHO05D000047 4.0e-07 58.2 89 33.7
Hma1.2p1_0093F.1_g046970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.0e-07 58.2 52 50.0
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.2e-07 57.8 57 45.6
CSS0015611 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.8e-07 57.4 69 36.2
Cpa.g.sc191.10 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-06 56.6 53 50.9
Atru.chr2.1022 Acer truncatum HOM05D000002 ORTHO05D000047 1.5e-06 56.2 60 41.7
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 1.5e-06 56.2 53 49.1
Prupe.3G076700 Prunus persica HOM05D000002 ORTHO05D000047 1.5e-06 56.2 53 49.1
Prupe.6G115900 Prunus persica HOM05D000002 ORTHO05D000047 1.5e-06 56.2 53 49.1
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 1.5e-06 56.2 53 49.1
Thecc.05G205900 Theobroma cacao HOM05D000002 ORTHO05D000047 1.5e-06 56.2 60 36.7
Cpa.g.sc110.7 Carica papaya HOM05D000002 ORTHO05D000047 2.0e-06 55.8 63 34.9
Lj3g0012381 Lotus japonicus HOM05D000002 ORTHO05D000047 2.0e-06 55.8 53 41.5
CSS0048790 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-06 55.5 54 40.7
Cpa.g.sc10.272 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-06 55.5 49 49.0
Cpa.g.sc17.60 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-06 55.5 46 56.5
CSS0036394 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-06 54.7 54 40.7
Cpa.g.sc86.23 Carica papaya HOM05D000002 ORTHO05D000047 4.4e-06 54.7 80 35.0
MELO3C029121.2 Cucumis melo HOM05D011088 ORTHO05D000047 4.4e-06 54.7 54 38.9
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 4.4e-06 54.7 75 36.0
MELO3C029634.2 Cucumis melo HOM05D011088 ORTHO05D000047 5.7e-06 54.3 56 39.3
MELO3C030888.2 Cucumis melo HOM05D011088 ORTHO05D000047 5.7e-06 54.3 54 38.9
Hma1.2p1_1841F.1_g304990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.7e-06 54.3 64 43.8
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-06 54.3 64 40.6
VMungo0251G1086 Vigna mungo HOM05D000336 ORTHO05D002705 5.7e-06 54.3 56 39.3
CiPaw.11G071100 Carya illinoinensis HOM05D000002 ORTHO05D000047 7.5e-06 53.9 57 42.1
ClCG09G017250 Citrullus lanatus HOM05D000002 ORTHO05D000001 9.8e-06 53.5 57 36.8
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 9.8e-06 53.5 54 42.6
Eucgr.H02766 Eucalyptus grandis HOM05D000002 ORTHO05D000047 9.8e-06 53.5 54 42.6
Hma1.2p1_0079F.1_g041630 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.8e-06 53.5 54 44.4
Oeu041660.4 Olea europaea HOM05D000002 ORTHO05D000047 9.8e-06 53.5 56 39.3
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 9.8e-06 53.5 56 44.6


User provided reference genes

Program Settings