Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.4 Carica papaya HOM05D002451 ORTHO05D005601 1.6e-97 359.4 178 100.0
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 4.6e-68 261.5 154 77.3
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 2.3e-67 259.2 155 76.1
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 3.9e-67 258.5 155 74.2
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 5.1e-67 258.1 154 76.0
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 1.1e-66 256.9 153 75.8
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 1.9e-66 256.1 155 74.8
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 2.5e-66 255.8 155 78.1
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 4.3e-66 255.0 155 76.1
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 5.6e-66 254.6 155 74.8
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 1.4e-64 250.0 155 73.5
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 1.4e-64 250.0 155 74.2
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 1.2e-63 246.9 155 72.9
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 2.0e-63 246.1 155 73.5
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 3.4e-63 245.4 156 75.0
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 4.4e-63 245.0 154 74.0
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 5.8e-63 244.6 155 72.9
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 9.9e-63 243.8 155 71.0
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 1.3e-62 243.4 154 74.0
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 3.8e-62 241.9 155 70.3
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 8.4e-62 240.7 155 70.3
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 1.4e-61 240.0 155 71.0
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 1.4e-61 240.0 155 69.7
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 1.9e-61 239.6 155 69.7
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 1.9e-61 239.6 155 70.3
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 4.2e-61 238.4 155 71.0
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 7.1e-61 237.7 157 70.1
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 1.2e-60 236.9 155 70.3
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 2.1e-60 236.1 154 69.5
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 2.1e-60 236.1 154 70.1
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 2.1e-60 236.1 155 71.0
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 4.6e-60 235.0 155 69.7
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 2.3e-59 232.6 154 68.8
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 2.3e-59 232.6 161 69.6
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 3.0e-59 232.3 155 69.7
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 3.0e-59 232.3 155 69.0
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 5.1e-59 231.5 155 70.3
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 5.1e-59 231.5 155 67.1
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 6.6e-59 231.1 155 69.0
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 1.9e-58 229.6 155 70.3
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 2.5e-58 229.2 154 64.9
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 4.3e-58 228.4 154 66.9
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 1.6e-57 226.5 154 66.9
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 4.8e-57 224.9 154 68.8
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 8.1e-57 224.2 154 67.5
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 8.1e-57 224.2 154 67.5
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 8.1e-57 224.2 154 66.2
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 1.1e-56 223.8 140 75.7
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 1.1e-56 223.8 154 66.9
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.1e-56 223.8 154 66.9
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 1.8e-56 223.0 155 66.5
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 2.4e-56 222.6 154 68.8
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 2.4e-56 222.6 155 67.1
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 3.1e-56 222.2 155 67.7
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 3.1e-56 222.2 154 68.2
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 4.0e-56 221.9 155 64.5
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 4.0e-56 221.9 154 67.5
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 6.9e-56 221.1 154 66.9
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 6.9e-56 221.1 155 63.9
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 6.9e-56 221.1 154 68.2
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 1.2e-55 220.3 154 68.8
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 2.0e-55 219.5 155 65.2
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 3.4e-55 218.8 154 64.3
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 9.9e-55 217.2 155 63.2
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 1.7e-54 216.5 154 64.9
CSS0044368 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 2.2e-54 216.1 160 63.1
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 2.2e-54 216.1 154 66.2
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 2.9e-54 215.7 155 63.9
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 6.4e-54 214.5 154 64.3
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 1.1e-53 213.8 153 64.1
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 1.4e-53 213.4 154 66.2
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 5.4e-53 211.5 155 63.2
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 9.3e-53 210.7 153 62.1
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 1.2e-52 210.3 155 68.4
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 1.6e-52 209.9 153 62.1
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 2.7e-52 209.1 153 61.4
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 2.7e-52 209.1 153 61.4
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 2.7e-52 209.1 153 61.4
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 6.0e-52 208.0 153 61.4
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 7.9e-52 207.6 154 60.4
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 1.0e-51 207.2 155 60.0
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 3.9e-51 205.3 155 59.4
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 5.1e-51 204.9 168 59.5
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 1.5e-50 203.4 154 60.4
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 1.3e-49 200.3 155 60.0
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 1.6e-49 199.9 154 57.8
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 8.1e-49 197.6 159 62.3
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 1.1e-48 197.2 154 60.4
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 2.4e-48 196.1 155 58.7
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 4.0e-48 195.3 131 68.7
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 3.4e-47 192.2 155 58.1
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 7.9e-44 181.0 154 55.2
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 7.9e-44 181.0 136 63.2
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 8.7e-43 177.6 156 53.8
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 5.8e-39 164.9 136 59.6
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 1.3e-38 163.7 152 50.0
TAR624G0206 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.3e-38 163.7 103 70.9
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 6.5e-38 161.4 170 48.8
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 7.4e-34 147.9 154 51.9
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 5.3e-32 141.7 86 72.1
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 5.3e-32 141.7 152 46.7
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 2.5e-29 132.9 153 44.4
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 1.1e-24 117.5 73 75.3
Sc17g0002930 Simmondsia chinensis HOM05D002451 ORTHO05D005601 2.4e-24 116.3 81 63.0
Aa31sc1931G10 Aethionema arabicum HOM05D002451 ORTHO05D005601 2.6e-23 112.8 82 57.3
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 1.9e-21 106.7 76 69.7
SHI11089 Sapria himalayana HOM05D002451 ORTHO05D005601 3.0e-19 99.4 73 65.8
CBR_g26190 Chara braunii HOM05D002451 ORTHO05D005601 5.7e-18 95.1 164 36.0
SHI11090 Sapria himalayana HOM05D002451 ORTHO05D005601 3.7e-17 92.4 63 57.1
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.1e-16 90.9 73 63.0
SGA_v2.0_scaffold123G33404 Striga asiatica HOM05D002451 ORTHO05D005601 2.9e-14 82.8 76 51.3
A06p15140 Brassica napus HOM05D002451 ORTHO05D020166 6.5e-14 81.6 111 45.9
BraA06t24629Z Brassica rapa HOM05D002451 ORTHO05D020166 6.5e-14 81.6 111 45.9
MCO12G207 Micromonas commoda HOM05D002451 ORTHO05D005601 3.3e-10 69.3 186 29.0
Medtr5g055460 Medicago truncatula HOM05D002451 ORTHO05D005601 1.7e-09 67.0 48 64.6


User provided reference genes

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