Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.3 Carica papaya HOM05D002451 ORTHO05D005601 4.1e-48 194.5 105 100.0
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 1.6e-31 139.4 96 76.0
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 1.7e-30 136.0 102 72.5
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 3.8e-30 134.8 102 70.6
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 5.0e-30 134.4 96 72.9
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 6.5e-30 134.0 96 71.9
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 8.5e-30 133.7 96 74.0
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 1.5e-29 132.9 102 70.6
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 3.2e-29 131.7 96 72.9
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 4.2e-29 131.3 96 71.9
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 7.2e-29 130.6 96 71.9
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 7.2e-29 130.6 96 70.8
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 9.4e-29 130.2 96 71.9
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 9.4e-29 130.2 96 71.9
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 1.6e-28 129.4 96 70.8
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 2.1e-28 129.0 96 71.9
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 3.6e-28 128.3 96 69.8
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 4.7e-28 127.9 96 70.8
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 8.0e-28 127.1 102 66.7
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 1.0e-27 126.7 96 68.8
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 1.4e-27 126.3 102 66.7
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 2.3e-27 125.6 102 66.7
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 3.0e-27 125.2 102 63.7
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 4.0e-27 124.8 102 66.7
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 4.0e-27 124.8 96 65.6
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 5.2e-27 124.4 96 66.7
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 5.2e-27 124.4 102 66.7
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 6.7e-27 124.0 96 67.7
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 6.7e-27 124.0 96 67.7
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 8.8e-27 123.6 96 67.7
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 8.8e-27 123.6 102 65.7
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 8.8e-27 123.6 96 64.6
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 1.1e-26 123.2 96 67.7
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 1.5e-26 122.9 102 62.7
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 1.5e-26 122.9 96 65.6
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 2.0e-26 122.5 100 63.0
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.6e-26 122.1 96 66.7
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 3.3e-26 121.7 102 67.6
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 4.4e-26 121.3 96 65.6
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 5.7e-26 120.9 96 66.7
CSS0026050 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 1.3e-25 119.8 96 63.5
CSS0028178 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 1.3e-25 119.8 96 63.5
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 2.2e-25 119.0 102 55.9
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 2.2e-25 119.0 97 67.0
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 2.2e-25 119.0 102 64.7
TAR624G0431 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.2e-25 119.0 96 63.5
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 2.8e-25 118.6 91 67.0
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 4.8e-25 117.9 96 64.6
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 4.8e-25 117.9 99 62.6
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 4.8e-25 117.9 99 62.6
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 4.8e-25 117.9 102 58.8
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 1.4e-24 116.3 102 58.8
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 1.8e-24 115.9 99 63.6
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 2.4e-24 115.5 102 61.8
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 3.1e-24 115.2 95 65.3
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 3.1e-24 115.2 96 60.4
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 4.1e-24 114.8 96 57.3
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 4.1e-24 114.8 99 62.6
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 5.3e-24 114.4 96 60.4
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 5.3e-24 114.4 96 61.5
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 7.0e-24 114.0 88 63.6
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 9.1e-24 113.6 102 57.8
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 1.6e-23 112.8 96 59.4
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 2.7e-23 112.1 96 60.4
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 4.5e-23 111.3 87 63.2
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 4.5e-23 111.3 102 58.8
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 5.9e-23 110.9 100 57.0
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 1.3e-22 109.8 96 60.4
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 1.3e-22 109.8 96 59.4
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 1.7e-22 109.4 96 60.4
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 2.2e-22 109.0 96 60.4
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 2.2e-22 109.0 100 57.0
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 2.9e-22 108.6 96 62.5
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 2.9e-22 108.6 95 61.1
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 3.8e-22 108.2 130 50.8
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 5.0e-22 107.8 96 57.3
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 5.0e-22 107.8 97 60.8
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 5.0e-22 107.8 96 58.3
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 5.0e-22 107.8 90 57.8
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 6.5e-22 107.5 97 59.8
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 1.9e-21 105.9 96 57.3
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 5.5e-21 104.4 98 60.2
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 7.2e-21 104.0 100 57.0
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.2e-20 103.2 73 75.3
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 2.1e-20 102.4 96 53.1
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 6.1e-20 100.9 91 58.2
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 1.4e-19 99.8 73 71.2
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 2.3e-19 99.0 96 55.2
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 1.5e-18 96.3 78 67.9
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 1.7e-17 92.8 91 53.8
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 2.2e-17 92.4 159 38.4
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 4.8e-17 91.3 73 60.3
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 6.3e-17 90.9 87 54.0
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 1.7e-14 82.8 90 50.0
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 2.9e-14 82.0 72 59.7
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 1.9e-13 79.3 102 52.0
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 3.2e-13 78.6 54 75.9
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 3.6e-12 75.1 94 46.8
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 6.1e-12 74.3 97 40.2
A06p15140 Brassica napus HOM05D002451 ORTHO05D020166 1.4e-11 73.2 92 45.7
BraA06t24629Z Brassica rapa HOM05D002451 ORTHO05D020166 1.4e-11 73.2 92 45.7
Hund28869 Selenicereus undatus HOM05D002451 ORTHO05D005601 3.0e-11 72.0 64 56.2
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 8.8e-11 70.5 63 58.7
Hund28828 Selenicereus undatus HOM05D002451 ORTHO05D005601 8.8e-11 70.5 68 52.9
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 8.3e-09 63.9 54 61.1
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 2.4e-08 62.4 100 38.0
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 2.3e-06 55.8 93 32.3


User provided reference genes

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