Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.169 Carica papaya HOM05D006122 ORTHO05D007426 4.2e-92 341.3 166 100.0
Nn1g04517 Nelumbo nucifera HOM05D006122 ORTHO05D007426 1.2e-78 296.6 166 84.3
Ciclev10026416m.g Citrus clementina HOM05D006122 ORTHO05D007426 7.5e-73 277.3 225 62.7
FAN14G0976 Fragaria x ananassa HOM05D006122 ORTHO05D007426 9.8e-73 276.9 166 79.5
Cfa003494 Carpinus fangiana HOM05D006122 ORTHO05D007426 6.4e-72 274.2 226 63.3
Thecc.06G126900 Theobroma cacao HOM05D006122 ORTHO05D007426 6.4e-72 274.2 226 63.7
Dinv37838 Davidia involucrata HOM05D006122 ORTHO05D007426 3.2e-71 271.9 226 62.4
Eucgr.J02608 Eucalyptus grandis HOM05D006122 ORTHO05D007426 7.8e-70 267.3 226 61.9
Manes.11G015100 Manihot esculenta HOM05D006122 ORTHO05D007426 1.0e-69 266.9 226 61.9
Prupe.3G035300 Prunus persica HOM05D006122 ORTHO05D007426 1.0e-69 266.9 226 62.8
Potri.010G076600 Populus trichocarpa HOM05D006122 ORTHO05D007426 1.7e-69 266.2 226 61.1
Sabra10G0032200 Salix brachista HOM05D000989 ORTHO05D001287 3.0e-69 265.4 224 60.3
EL10Ac5g12242 Beta vulgaris HOM05D006122 ORTHO05D007426 5.1e-69 264.6 215 62.8
CSS0025263 Camellia sinensis var. sinensis HOM05D006122 ORTHO05D007426 5.1e-69 264.6 224 61.2
CiPaw.02G133000 Carya illinoinensis HOM05D006122 ORTHO05D007426 6.6e-69 264.2 224 61.6
Hma1.2p1_0229F.1_g096920 Hydrangea macrophylla HOM05D006122 ORTHO05D007426 6.6e-69 264.2 224 61.2
TAR383G0669 Trochodendron aralioides HOM05D006122 ORTHO05D007426 7.3e-68 260.8 226 59.3
GSVIVG01016699001 Vitis vinifera HOM05D006122 ORTHO05D007426 7.3e-68 260.8 226 59.3
Actinidia26007 Actinidia chinensis HOM05D006122 ORTHO05D007426 9.5e-68 260.4 226 60.6
CANSAT56G0704 Cannabis sativa HOM05D006122 ORTHO05D007426 9.5e-68 260.4 226 59.7
Duzib235G1006 Durio zibethinus HOM05D006122 ORTHO05D007426 9.5e-68 260.4 226 61.5
vmacro22018 Vaccinium macrocarpon HOM05D006122 ORTHO05D007426 9.5e-68 260.4 238 57.6
PGR102G1167 Punica granatum HOM05D006122 ORTHO05D007426 1.2e-67 260.0 226 60.2
COL.COLO4_30828 Corchorus olitorius HOM05D006122 ORTHO05D007426 1.6e-67 259.6 226 60.2
MD17G1150700 Malus domestica HOM05D006122 ORTHO05D007426 1.6e-67 259.6 224 61.2
AUR62018816 Chenopodium quinoa HOM05D006122 ORTHO05D007426 2.8e-67 258.8 235 57.4
Oeu000384.1 Olea europaea HOM05D006122 ORTHO05D007426 2.8e-67 258.8 222 62.2
Gohir.A05G138000 Gossypium hirsutum HOM05D006122 ORTHO05D007426 4.7e-67 258.1 226 59.7
Gohir.D05G140100 Gossypium hirsutum HOM05D006122 ORTHO05D007426 4.7e-67 258.1 226 59.7
Gorai.009G144400 Gossypium raimondii HOM05D006122 ORTHO05D007426 4.7e-67 258.1 226 59.7
DCAR_022657 Daucus carota HOM05D006122 ORTHO05D007426 6.2e-67 257.7 226 61.5
MD09G1176300 Malus domestica HOM05D006122 ORTHO05D007426 1.4e-66 256.5 224 60.3
AUR62007187 Chenopodium quinoa HOM05D006122 ORTHO05D007426 3.1e-66 255.4 229 58.5
Hund14473 Selenicereus undatus HOM05D006122 ORTHO05D007426 4.0e-66 255.0 251 55.0
Peaxi162Scf01003g00013 Petunia axillaris HOM05D006122 ORTHO05D007426 5.2e-66 254.6 225 58.2
AL1G29610 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 8.9e-66 253.8 225 60.4
Rhsim12G0212300 Rhododendron simsii HOM05D006122 ORTHO05D007426 8.9e-66 253.8 275 52.0
Lsat_1_v5_gn_8_4120 Lactuca sativa HOM05D006122 ORTHO05D007426 1.5e-65 253.1 219 59.4
MSTRG.22530 Avicennia marina HOM05D006122 ORTHO05D007426 7.5e-65 250.8 227 57.7
AT1G17350 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 9.9e-65 250.4 225 59.1
RcHm_v2.0_Chr2g0146911 Rosa chinensis HOM05D006122 ORTHO05D007426 1.3e-64 250.0 226 58.4
FvH4_6g35380 Fragaria vesca HOM05D006122 ORTHO05D007426 1.7e-64 249.6 226 58.4
Carub.0001s1711 Capsella rubella HOM05D006122 ORTHO05D007426 2.2e-64 249.2 225 59.1
Cc04_g00910 Coffea canephora HOM05D006122 ORTHO05D007426 2.2e-64 249.2 229 56.8
TWI59G0171 Tripterygium wilfordii HOM05D006122 ORTHO05D007426 2.2e-64 249.2 226 58.4
VMungo0331G0398 Vigna mungo HOM05D006122 ORTHO05D007426 2.9e-64 248.8 227 57.7
Sed0027026 Sechium edule HOM05D006122 ORTHO05D007426 3.7e-64 248.4 226 57.1
Solyc11g005060.2 Solanum lycopersicum HOM05D006122 ORTHO05D007426 3.7e-64 248.4 225 56.9
CARHR017950 Cardamine hirsuta HOM05D006122 ORTHO05D007426 4.9e-64 248.1 225 57.8
Migut.I01117 Erythranthe guttata HOM05D006122 ORTHO05D007426 4.9e-64 248.1 227 56.4
Phvul.010G126800 Phaseolus vulgaris HOM05D006122 ORTHO05D007426 6.4e-64 247.7 227 57.3
QL05p002004 Quercus lobata HOM05D006122 ORTHO05D007426 6.4e-64 247.7 225 57.3
A06p13310 Brassica napus HOM05D006122 ORTHO05D007426 8.3e-64 247.3 232 57.3
THA.LOC104812266 Tarenaya hassleriana HOM05D006122 ORTHO05D007426 1.1e-63 246.9 228 57.9
ECA238G0672 Erigeron canadensis HOM05D006122 ORTHO05D007426 1.4e-63 246.5 228 56.6
Glyma.07G043200 Glycine max HOM05D006122 ORTHO05D007426 1.4e-63 246.5 227 56.8
Glyma.16G011600 Glycine max HOM05D006122 ORTHO05D007426 1.4e-63 246.5 227 56.8
ATR0068G105 Amborella trichopoda HOM05D006122 ORTHO05D007426 1.9e-63 246.1 224 56.2
HanXRQChr09g0277171 Helianthus annuus HOM05D006122 ORTHO05D007426 2.4e-63 245.7 228 56.1
BraA06t24484Z Brassica rapa HOM05D006122 ORTHO05D007426 3.2e-63 245.4 231 57.1
CAN.G1227.1 Capsicum annuum HOM05D006122 ORTHO05D007426 3.2e-63 245.4 229 55.5
Thhalv10008577m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 3.2e-63 245.4 225 57.8
PSO063G2922 Papaver somniferum HOM05D006122 ORTHO05D007426 3.2e-63 245.4 223 57.8
Sp1g15490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 7.1e-63 244.2 225 58.2
SpUn0033_0060 Schrenkiella parvula HOM05D006122 ORTHO05D007426 7.1e-63 244.2 225 58.2
Aqoxy3G03460 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 9.2e-63 243.8 225 57.3
PSO832G0128 Papaver somniferum HOM05D006122 ORTHO05D007426 1.2e-62 243.4 224 57.1
Sopen11g001060 Solanum pennellii HOM05D006122 ORTHO05D007426 1.6e-62 243.0 239 53.6
Lj3g0011237 Lotus japonicus HOM05D006122 ORTHO05D007426 2.7e-62 242.3 227 56.8
Os01g0727400 Oryza sativa ssp. japonica HOM05D006122 ORTHO05D007426 3.5e-62 241.9 228 55.7
C05p15780 Brassica napus HOM05D006122 ORTHO05D007426 6.0e-62 241.1 232 56.5
BolC5t30283H Brassica oleracea HOM05D006122 ORTHO05D007426 6.0e-62 241.1 232 56.5
CsaV3_4G002610 Cucumis sativus L. HOM05D006122 ORTHO05D007426 7.8e-62 240.7 226 55.8
Sp5g27490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 1.0e-61 240.4 226 56.2
AT1G72420 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 2.3e-61 239.2 226 56.2
BcaNung07320 Brassica carinata HOM05D006122 ORTHO05D007426 3.9e-61 238.4 225 57.8
Lalb_Chr10g0101271 Lupinus albus HOM05D006122 ORTHO05D007426 1.5e-60 236.5 224 56.2
Psat4g219480 Pisum sativum HOM05D006122 ORTHO05D007426 1.9e-60 236.1 227 54.6
HPP92_026812 Vanilla planifolia HOM05D006122 ORTHO05D007426 1.9e-60 236.1 225 55.1
Carub.0002s1927 Capsella rubella HOM05D006122 ORTHO05D007426 4.3e-60 235.0 226 54.9
Lj5A31T62 Lonicera japonica HOM05D006122 ORTHO05D007426 4.3e-60 235.0 230 55.2
Ah.07g199940 Amaranthus hybridus HOM05D006122 ORTHO05D007426 9.6e-60 233.8 210 57.6
Nitab4.5_0001168g0090 Nicotiana tabacum HOM05D006122 ORTHO05D007426 2.1e-59 232.6 209 56.9
Medtr8g022330 Medicago truncatula HOM05D006122 ORTHO05D007426 2.8e-59 232.3 226 53.1
Thhalv10019098m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 4.7e-59 231.5 226 55.3
MELO3C017781.2 Cucumis melo HOM05D006122 ORTHO05D007426 8.1e-59 230.7 209 57.9
Zm00001eb361800 Zea mays HOM05D006122 ORTHO05D007426 1.1e-58 230.3 228 53.1
CARHR065320 Cardamine hirsuta HOM05D006122 ORTHO05D007426 1.8e-58 229.6 226 53.1
arahy.Tifrunner.gnm1.ann1.DIA1Z1 Arachis hypogaea HOM05D006122 ORTHO05D007426 4.0e-58 228.4 229 55.0
arahy.Tifrunner.gnm1.ann1.JC3XNH Arachis hypogaea HOM05D006122 ORTHO05D007426 4.0e-58 228.4 229 55.0
C06p46770 Brassica napus HOM05D006122 ORTHO05D007426 4.0e-58 228.4 227 53.3
Ca_23414_v3 Cicer arietinum L. HOM05D006122 ORTHO05D007426 4.0e-58 228.4 216 55.1
A07p38600 Brassica napus HOM05D006122 ORTHO05D007426 5.2e-58 228.0 238 51.3
SGA_v2.0_scaffold71G23902 Striga asiatica HOM05D006122 ORTHO05D007426 2.0e-57 226.1 242 51.7
unitig_32.g10995 Utricularia gibba HOM05D006122 ORTHO05D007426 4.4e-57 224.9 224 52.2
BolC6t39721H Brassica oleracea HOM05D006122 ORTHO05D007426 2.4e-55 219.2 245 49.0
HPP92_000787 Vanilla planifolia HOM05D006122 ORTHO05D007426 1.2e-54 216.9 208 53.8
BraA07t31418Z Brassica rapa HOM05D006122 ORTHO05D007426 1.6e-54 216.5 265 46.4
CDE02G1839 Ceratophyllum demersum HOM05D006122 ORTHO05D007426 5.3e-50 201.4 224 50.4
Haze_16093 Corylus avellana HOM05D006122 ORTHO05D007426 1.5e-49 199.9 282 42.9
Haze_16097 Corylus avellana HOM05D006122 ORTHO05D007426 1.5e-49 199.9 282 42.9
Aa31LG4G2750 Aethionema arabicum HOM05D006122 ORTHO05D007426 6.6e-45 184.5 201 52.7
MBI13_g36947_MAGBIO Magnolia biondii HOM05D006122 ORTHO05D007426 2.8e-43 179.1 103 81.6
SalBow5G3255 Salvia bowleyana HOM05D006122 ORTHO05D007426 2.8e-43 179.1 193 53.4
Sc01g0007910 Simmondsia chinensis HOM05D006122 ORTHO05D007426 2.4e-42 176.0 103 82.5
Duzib160G0673 Durio zibethinus HOM05D006122 ORTHO05D007426 1.7e-40 169.9 103 79.6
Aqoxy301s003 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 1.8e-37 159.8 103 74.8
FAN09G0799 Fragaria x ananassa HOM05D006122 ORTHO05D007426 2.5e-36 156.0 98 73.5
TPR.G16670 Trifolium pratense HOM05D006122 ORTHO05D007426 3.7e-35 152.1 104 70.2
Pp3c3_21840 Physcomitrium patens HOM05D006122 ORTHO05D007426 6.2e-35 151.4 222 37.8
SalBow5G2173 Salvia bowleyana HOM05D006122 ORTHO05D007426 6.2e-35 151.4 119 64.7
Mapoly0158s0026 Marchantia polymorpha HOM05D006122 ORTHO05D007426 3.5e-30 135.6 221 32.1
TPR.G16651 Trifolium pratense HOM05D006122 ORTHO05D007426 6.9e-26 121.3 63 85.7
Nn4g23234 Nelumbo nucifera HOM05D006122 ORTHO05D007426 1.2e-25 120.6 70 80.0
Actinidia31156 Actinidia chinensis HOM05D006122 ORTHO05D007426 1.0e-24 117.5 91 65.9
AL2G32090 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 5.0e-24 115.2 142 45.1
CBR_g33997 Chara braunii HOM05D006122 ORTHO05D007426 6.5e-24 114.8 219 30.6
BcaB03g14993 Brassica carinata HOM05D006122 ORTHO05D007426 8.4e-24 114.4 70 74.3
BcaB03g14991 Brassica carinata HOM05D006122 ORTHO05D007426 9.3e-23 110.9 143 43.4
SEGI_37442 Sequoiadendron giganteum HOM05D006122 ORTHO05D007426 1.6e-22 110.2 62 77.4
AagrBONN_evm.TU.Sc2ySwM_362.2335 Anthoceros agrestis HOM05D006122 ORTHO05D007426 7.4e-20 101.3 154 38.3
Nn1g08880 Nelumbo nucifera HOM05D006122 ORTHO05D007426 2.8e-19 99.4 55 81.8
SHI23560 Sapria himalayana HOM05D006122 ORTHO05D007426 3.7e-19 99.0 62 67.7
SMO165G0005 Selaginella moellendorffii HOM05D006122 ORTHO05D007426 9.7e-12 74.3 197 23.4
CAN.G526.12 Capsicum annuum HOM05D006122 ORTHO05D007426 2.8e-11 72.8 116 41.4
Cre02.g076750 Chlamydomonas reinhardtii HOM05D006122 ORTHO05D007426 4.2e-07 58.9 107 33.6


User provided reference genes

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