Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.117 Carica papaya HOM05D008345 ORTHO05D010179 4.8e-69 265.0 206 100.0
Cfa003533 Carpinus fangiana HOM05D008345 ORTHO05D010179 7.8e-11 71.6 43 81.4
Ciclev10026572m.g Citrus clementina HOM05D008345 ORTHO05D010179 1.7e-10 70.5 45 73.3
TWI79G1189 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 1.5e-09 67.4 40 82.5
CANSAT56G1799 Cannabis sativa HOM05D008345 ORTHO05D010179 2.5e-09 66.6 42 78.6
ClCG07G014060 Citrullus lanatus HOM05D008345 ORTHO05D010179 4.3e-09 65.9 43 74.4
Prupe.3G041900 Prunus persica HOM05D008345 ORTHO05D010179 4.3e-09 65.9 40 85.0
MELO3C025805.2 Cucumis melo HOM05D008345 ORTHO05D010179 5.6e-09 65.5 43 74.4
CsaV3_3G031340 Cucumis sativus L. HOM05D008345 ORTHO05D010179 5.6e-09 65.5 43 74.4
FvH4_6g34720 Fragaria vesca HOM05D008345 ORTHO05D010179 5.6e-09 65.5 40 80.0
FAN14G1116 Fragaria x ananassa HOM05D008345 ORTHO05D010179 5.6e-09 65.5 55 63.6
TWI31G0115 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 5.6e-09 65.5 39 82.1
RcHm_v2.0_Chr2g0145371 Rosa chinensis HOM05D008345 ORTHO05D010179 7.3e-09 65.1 38 84.2
Sabra01G0141900 Salix brachista HOM05D008345 ORTHO05D010179 9.5e-09 64.7 40 77.5
FAN02G4084 Fragaria x ananassa HOM05D008345 ORTHO05D010179 1.2e-08 64.3 40 77.5
FAN05G3870 Fragaria x ananassa HOM05D008345 ORTHO05D010179 1.2e-08 64.3 40 77.5
Manes.04G144600 Manihot esculenta HOM05D008345 ORTHO05D010179 1.2e-08 64.3 44 68.2
FAN09G3851 Fragaria x ananassa HOM05D008345 ORTHO05D010179 1.6e-08 63.9 40 77.5
COL.COLO4_30757 Corchorus olitorius HOM05D008345 ORTHO05D010179 2.1e-08 63.5 38 86.8
Gohir.A05G140100 Gossypium hirsutum HOM05D008345 ORTHO05D010179 2.1e-08 63.5 37 86.5
Gohir.D05G142400 Gossypium hirsutum HOM05D008345 ORTHO05D010179 2.1e-08 63.5 37 86.5
Gorai.009G146400 Gossypium raimondii HOM05D008345 ORTHO05D010179 2.1e-08 63.5 37 86.5
Potri.003G064900 Populus trichocarpa HOM05D008345 ORTHO05D010179 2.1e-08 63.5 40 75.0
Sabra03G0038200 Salix brachista HOM05D008345 ORTHO05D010179 2.1e-08 63.5 40 75.0
CiPaw.01G218600 Carya illinoinensis HOM05D008345 ORTHO05D010179 3.6e-08 62.8 41 75.6
Duzib192G0347 Durio zibethinus HOM05D008345 ORTHO05D010179 3.6e-08 62.8 38 78.9
Aa31LG4G2900 Aethionema arabicum HOM05D013126 ORTHO05D015256 6.2e-08 62.0 42 73.8
Glyma.07G038300 Glycine max HOM05D008345 ORTHO05D010179 1.1e-07 61.2 40 75.0
Sed0012336 Sechium edule HOM05D008345 ORTHO05D010179 1.1e-07 61.2 43 72.1
QL05p007306 Quercus lobata HOM05D008345 ORTHO05D010179 1.4e-07 60.8 44 68.2
Thecc.06G120000 Theobroma cacao HOM05D008345 ORTHO05D010179 1.4e-07 60.8 38 81.6
Ca_23374_v3 Cicer arietinum L. HOM05D008345 ORTHO05D010179 1.8e-07 60.5 40 70.0
PGR119G1016 Punica granatum HOM05D008345 ORTHO05D010179 2.3e-07 60.1 41 70.7
Atru.chr1.3940 Acer truncatum HOM05D008345 ORTHO05D010179 4.0e-07 59.3 58 60.3
Duzib160G0403 Durio zibethinus HOM05D008345 ORTHO05D010179 4.0e-07 59.3 38 78.9
Duzib235G0194 Durio zibethinus HOM05D008345 ORTHO05D010179 4.0e-07 59.3 38 78.9
Glyma.16G007500 Glycine max HOM05D008345 ORTHO05D010179 4.0e-07 59.3 39 74.4
Phvul.010G130100 Phaseolus vulgaris HOM05D008345 ORTHO05D010179 4.0e-07 59.3 36 80.6
EL10Ac7g16409 Beta vulgaris HOM05D008345 ORTHO05D010179 6.8e-07 58.5 37 78.4
Lalb_Chr04g0263511 Lupinus albus HOM05D008345 ORTHO05D010179 8.9e-07 58.2 38 71.1
CiPaw.02G135800 Carya illinoinensis HOM05D008345 ORTHO05D010179 1.2e-06 57.8 39 76.9
Nn6g35611 Nelumbo nucifera HOM05D008345 ORTHO05D010179 1.2e-06 57.8 45 64.4
Nn8g38674 Nelumbo nucifera HOM05D042106 ORTHO05D010179 1.2e-06 57.8 41 65.9
Medtr8g020530 Medicago truncatula HOM05D008345 ORTHO05D010179 1.5e-06 57.4 44 63.6
CARHR065530 Cardamine hirsuta HOM05D013126 ORTHO05D015256 2.6e-06 56.6 43 69.8
Lj3g0003445 Lotus japonicus HOM05D008345 ORTHO05D010179 3.4e-06 56.2 40 67.5
Lj4g0027375 Lotus japonicus HOM05D008345 ORTHO05D010179 3.4e-06 56.2 40 67.5
Sc12g0010590 Simmondsia chinensis HOM05D008345 ORTHO05D010179 4.4e-06 55.8 37 75.7
Actinidia21788 Actinidia chinensis HOM05D008345 ORTHO05D010179 5.8e-06 55.5 43 62.8
THA.LOC104810363 Tarenaya hassleriana HOM05D009071 ORTHO05D011247 5.8e-06 55.5 44 59.1
VMungo0331G1836 Vigna mungo HOM05D008345 ORTHO05D010179 7.5e-06 55.1 35 74.3
TPR.G32503 Trifolium pratense HOM05D008345 ORTHO05D010179 9.9e-06 54.7 39 66.7


User provided reference genes

Program Settings