Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc246.8 Carica papaya HOM05D005618 ORTHO05D118306 2.3e-145 518.8 258 100.0
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 4.5e-08 62.8 46 73.9
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 7.7e-08 62.0 47 72.3
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 7.7e-08 62.0 47 72.3
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 1.0e-07 61.6 44 75.0
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 1.7e-07 60.8 42 78.6
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 2.9e-07 60.1 41 78.0
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 3.8e-07 59.7 46 67.4
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 5.0e-07 59.3 44 72.7
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 6.5e-07 58.9 38 78.9
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 8.5e-07 58.5 40 75.0
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 8.5e-07 58.5 50 62.0
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 1.1e-06 58.2 41 73.2
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 1.5e-06 57.8 41 75.6
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.9e-06 57.4 42 71.4
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 1.9e-06 57.4 44 70.5
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 1.9e-06 57.4 41 73.2
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 2.5e-06 57.0 41 70.7
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 3.2e-06 56.6 42 73.8
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 4.2e-06 56.2 38 76.3
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 4.2e-06 56.2 41 70.7
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 4.2e-06 56.2 37 78.4
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 4.2e-06 56.2 41 70.7
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 4.2e-06 56.2 41 68.3
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 5.5e-06 55.8 38 78.9
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 5.5e-06 55.8 41 70.7
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 5.5e-06 55.8 41 70.7
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 5.5e-06 55.8 41 70.7
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 5.5e-06 55.8 42 69.0
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 5.5e-06 55.8 37 81.1
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 5.5e-06 55.8 46 63.0
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 5.5e-06 55.8 46 60.9
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 5.5e-06 55.8 38 73.7
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 5.5e-06 55.8 47 61.7
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 7.2e-06 55.5 46 60.9
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 7.2e-06 55.5 37 78.4
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 9.4e-06 55.1 47 61.7
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 9.4e-06 55.1 42 69.0
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 9.4e-06 55.1 41 70.7
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 9.4e-06 55.1 45 66.7
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 9.4e-06 55.1 46 63.0


User provided reference genes

Program Settings