Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 1.6e-135 486.1 243 100.0
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 1.7e-118 429.5 235 90.6
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.2e-116 423.3 241 86.3
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 1.4e-115 419.9 235 89.4
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 4.0e-115 418.3 240 87.1
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 8.9e-115 417.2 238 87.0
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 1.2e-114 416.8 238 88.2
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 4.4e-114 414.8 232 87.5
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 4.4e-114 414.8 239 86.2
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 5.8e-114 414.5 238 86.6
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 7.5e-114 414.1 233 88.0
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 7.5e-114 414.1 233 87.6
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 9.9e-114 413.7 240 86.2
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 1.7e-113 412.9 238 86.6
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 1.7e-113 412.9 231 89.2
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 2.9e-113 412.1 239 86.6
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 3.7e-113 411.8 237 86.9
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 4.1e-112 408.3 231 86.1
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 7.1e-112 407.5 235 85.1
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.1e-111 406.0 223 90.6
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 3.5e-111 405.2 230 87.0
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 7.8e-111 404.1 239 85.4
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 7.8e-111 404.1 240 85.4
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 2.3e-110 402.5 231 85.7
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 1.1e-109 400.2 238 84.0
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 2.5e-109 399.1 238 82.8
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 2.5e-109 399.1 240 84.6
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 9.5e-109 397.1 233 85.0
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.8e-108 395.6 240 83.8
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 4.7e-108 394.8 237 82.7
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 6.2e-108 394.4 237 83.1
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 8.1e-108 394.0 244 82.4
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 1.1e-107 393.7 239 84.5
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 3.1e-107 392.1 238 83.2
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 3.1e-107 392.1 242 79.8
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 3.1e-107 392.1 233 85.4
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 4.0e-107 391.7 233 84.1
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 5.2e-107 391.3 239 82.4
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 6.8e-107 391.0 247 81.8
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.6e-106 389.0 243 83.1
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 4.4e-106 388.3 238 81.9
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 5.8e-106 387.9 238 82.4
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 9.9e-106 387.1 236 86.0
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 1.3e-105 386.7 238 81.1
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.3e-105 386.7 230 83.0
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 2.9e-105 385.6 230 82.6
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 1.4e-104 383.3 249 79.1
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 1.4e-104 383.3 249 79.1
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.9e-104 382.9 238 81.5
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 7.1e-104 380.9 248 77.4
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 1.2e-103 380.2 222 86.5
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 6.0e-103 377.9 233 81.1
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 7.8e-103 377.5 238 81.1
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 5.1e-102 374.8 233 80.3
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 5.1e-102 374.8 233 80.3
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 8.7e-102 374.0 242 82.2
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 2.5e-101 372.5 241 79.7
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 5.6e-101 371.3 243 79.0
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 5.6e-101 371.3 221 81.9
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.2e-100 370.2 248 76.6
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.6e-100 368.6 241 78.4
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 3.6e-100 368.6 241 78.4
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 3.1e-99 365.5 227 83.7
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 6.9e-99 364.4 229 80.8
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.2e-98 363.6 236 79.2
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.4e-98 362.1 229 80.3
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 6.4e-97 357.8 236 75.4
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 2.7e-95 352.4 226 75.7
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 3.5e-95 352.1 255 72.5
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 4.6e-95 351.7 238 75.2
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 4.6e-95 351.7 205 87.8
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.3e-94 350.1 237 74.7
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 1.3e-94 350.1 235 74.5
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 3.0e-94 349.0 226 74.3
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 1.8e-91 339.7 224 77.7
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 1.8e-91 339.7 237 71.3
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.2e-88 328.9 229 75.5
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 5.4e-88 328.2 252 71.8
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 5.4e-88 328.2 252 70.6
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 1.3e-86 323.6 203 79.8
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 4.8e-84 315.1 237 68.4
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 6.2e-84 314.7 198 80.8
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 7.6e-82 307.8 179 84.4
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 9.3e-80 300.8 200 77.5
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 5.8e-74 281.6 223 69.1
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 5.5e-72 275.0 247 63.2
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 3.0e-70 269.2 239 59.0
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.8e-67 260.0 136 90.4
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 6.1e-63 245.0 219 54.8
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 7.4e-61 238.0 139 85.6
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 6.3e-60 235.0 165 72.7
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 5.5e-56 221.9 219 52.1
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 6.1e-55 218.4 241 51.0
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 8.8e-54 214.5 151 72.8
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 3.6e-31 139.4 82 80.5
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.3e-25 120.2 218 33.5
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 2.0e-18 97.1 124 52.4
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.4e-11 74.3 57 63.2


User provided reference genes

Program Settings