Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc24.94 Carica papaya HOM05D000762 ORTHO05D006179 3.5e-39 164.5 82 100.0
Potri.003G106000 Populus trichocarpa HOM05D000762 ORTHO05D006179 2.6e-18 95.1 53 84.9
Sabra03G0072900 Salix brachista HOM05D000762 ORTHO05D006179 5.8e-18 94.0 53 84.9
ClCG11G016210 Citrullus lanatus HOM05D007105 ORTHO05D009304 1.7e-17 92.4 53 79.2
Haze_08030 Corylus avellana HOM05D000762 ORTHO05D006179 1.7e-17 92.4 53 83.0
HanXRQChr07g0204501 Helianthus annuus HOM05D000762 ORTHO05D006179 2.9e-17 91.7 83 54.2
DCAR_030950 Daucus carota HOM05D000762 ORTHO05D006179 6.5e-17 90.5 83 53.0
Lj2g0003478 Lotus japonicus HOM05D000762 ORTHO05D006179 6.5e-17 90.5 51 84.3
Ca_18033_v3 Cicer arietinum L. HOM05D000762 ORTHO05D006179 8.4e-17 90.1 60 70.0
Gohir.A12G200600 Gossypium hirsutum HOM05D000762 ORTHO05D006179 1.1e-16 89.7 53 77.4
Glyma.09G216700 Glycine max HOM05D000762 ORTHO05D006179 1.4e-16 89.4 53 77.4
Prupe.5G016000 Prunus persica HOM05D000762 ORTHO05D006179 1.4e-16 89.4 53 75.5
SGA_v2.0_scaffold27G11724 Striga asiatica HOM05D000762 ORTHO05D006179 1.4e-16 89.4 66 63.6
vmacro00115 Vaccinium macrocarpon HOM05D000762 ORTHO05D006179 1.4e-16 89.4 56 71.4
GSVIVG01036916001 Vitis vinifera HOM05D000762 ORTHO05D006179 1.4e-16 89.4 53 75.5
CiPaw.11G076700 Carya illinoinensis HOM05D000762 ORTHO05D006179 1.9e-16 89.0 53 81.1
MELO3C010539.2 Cucumis melo HOM05D000762 ORTHO05D006179 1.9e-16 89.0 53 75.5
CsaV3_4G037910 Cucumis sativus L. HOM05D000762 ORTHO05D006179 1.9e-16 89.0 53 75.5
FAN04G2135 Fragaria x ananassa HOM05D000762 ORTHO05D006179 1.9e-16 89.0 56 71.4
FAN08G1370 Fragaria x ananassa HOM05D000762 ORTHO05D006179 1.9e-16 89.0 56 71.4
Thecc.03G322500 Theobroma cacao HOM05D000762 ORTHO05D006179 1.9e-16 89.0 53 75.5
arahy.Tifrunner.gnm1.ann1.GB6XSM Arachis hypogaea HOM05D000762 ORTHO05D006179 2.5e-16 88.6 53 77.4
arahy.Tifrunner.gnm1.ann1.RB8GEU Arachis hypogaea HOM05D000762 ORTHO05D006179 2.5e-16 88.6 53 77.4
Ca_25069_v3 Cicer arietinum L. HOM05D000762 ORTHO05D006179 2.5e-16 88.6 56 71.4
Duzib068G0194 Durio zibethinus HOM05D000762 ORTHO05D006179 2.5e-16 88.6 53 75.5
Migut.A00494 Erythranthe guttata HOM05D000762 ORTHO05D006179 2.5e-16 88.6 82 50.0
FAN13G2277 Fragaria x ananassa HOM05D000762 ORTHO05D006179 2.5e-16 88.6 56 73.2
THA.LOC104814382 Tarenaya hassleriana HOM05D000762 ORTHO05D006179 2.5e-16 88.6 67 61.2
CSS0006761 Camellia sinensis var. sinensis HOM05D000762 ORTHO05D006179 3.2e-16 88.2 53 75.5
CSS0047392 Camellia sinensis var. sinensis HOM05D000762 ORTHO05D006179 3.2e-16 88.2 53 75.5
FvH4_5g24460 Fragaria vesca HOM05D000762 ORTHO05D006179 3.2e-16 88.2 56 73.2
FAN13G3000 Fragaria x ananassa HOM05D000762 ORTHO05D006179 3.2e-16 88.2 56 73.2
MD16G1287200 Malus domestica HOM05D000762 ORTHO05D006179 3.2e-16 88.2 53 73.6
AUR62027292 Chenopodium quinoa HOM05D000762 ORTHO05D006179 4.2e-16 87.8 53 77.4
Hma1.2p1_0262F.1_g105200 Hydrangea macrophylla HOM05D000762 ORTHO05D006179 4.2e-16 87.8 53 77.4
Hma1.2p1_0262F.1_g105210 Hydrangea macrophylla HOM05D000762 ORTHO05D006179 4.2e-16 87.8 53 77.4
RcHm_v2.0_Chr7g0214871 Rosa chinensis HOM05D000762 ORTHO05D006179 4.2e-16 87.8 53 75.5
CARHR287020 Cardamine hirsuta HOM05D000762 ORTHO05D006179 5.5e-16 87.4 53 77.4
CsaV3_UNG224740 Cucumis sativus L. HOM05D000762 ORTHO05D006179 5.5e-16 87.4 58 72.4
FAN18G3726 Fragaria x ananassa HOM05D000762 ORTHO05D006179 5.5e-16 87.4 56 71.4
Carub.0001s2992 Capsella rubella HOM05D000762 ORTHO05D006179 7.1e-16 87.0 60 70.0
CsaV3_5G019990 Cucumis sativus L. HOM05D000762 ORTHO05D006179 7.1e-16 87.0 50 82.0
Glyma.01G151466 Glycine max HOM05D000762 ORTHO05D006179 7.1e-16 87.0 53 73.6
Gohir.D12G203400 Gossypium hirsutum HOM05D000762 ORTHO05D006179 7.1e-16 87.0 53 73.6
Gorai.008G218200 Gossypium raimondii HOM05D000762 ORTHO05D006179 7.1e-16 87.0 53 73.6
Sed0017777 Sechium edule HOM05D000762 ORTHO05D006179 7.1e-16 87.0 53 79.2
BcaB04g18149 Brassica carinata HOM05D000762 ORTHO05D006179 9.3e-16 86.7 66 63.6
SalBow4G2613 Salvia bowleyana HOM05D000762 ORTHO05D006179 9.3e-16 86.7 53 67.9
ECA233G0984 Erigeron canadensis HOM05D000762 ORTHO05D006179 1.2e-15 86.3 83 53.0
Phvul.002G124000 Phaseolus vulgaris HOM05D000762 ORTHO05D006179 1.2e-15 86.3 53 75.5
Psat2g144120 Pisum sativum HOM05D000762 ORTHO05D006179 1.2e-15 86.3 83 54.2
MSTRG.11843 Avicennia marina HOM05D000762 ORTHO05D006179 1.6e-15 85.9 53 69.8
Manes.15G190150 Manihot esculenta HOM05D000762 ORTHO05D006179 1.6e-15 85.9 53 71.7
PGR031G0157 Punica granatum HOM05D000762 ORTHO05D006179 1.6e-15 85.9 65 64.6
Aa31LG2G14450 Aethionema arabicum HOM05D000762 ORTHO05D006179 2.1e-15 85.5 53 75.5
Dinv09425 Davidia involucrata HOM05D000762 ORTHO05D006179 2.7e-15 85.1 66 65.2
Lj8A371G20 Lonicera japonica HOM05D000762 ORTHO05D006179 2.7e-15 85.1 50 78.0
Medtr5g026280 Medicago truncatula HOM05D000762 ORTHO05D006179 2.7e-15 85.1 53 73.6
QL12p002432 Quercus lobata HOM05D000762 ORTHO05D006179 2.7e-15 85.1 53 73.6
Rhsim11G0040700 Rhododendron simsii HOM05D000762 ORTHO05D006179 2.7e-15 85.1 49 77.6
Sc07g0008180 Simmondsia chinensis HOM05D000762 ORTHO05D006179 2.7e-15 85.1 56 69.6
TPR.G30313 Trifolium pratense HOM05D000762 ORTHO05D006179 2.7e-15 85.1 53 71.7
TWI32G0449 Tripterygium wilfordii HOM05D000762 ORTHO05D006179 2.7e-15 85.1 56 71.4
VMungo1215G2102 Vigna mungo HOM05D000762 ORTHO05D006179 2.7e-15 85.1 53 75.5
COL.COLO4_16726 Corchorus olitorius HOM05D000762 ORTHO05D006179 3.5e-15 84.7 53 69.8
Lsat_1_v5_gn_8_24940 Lactuca sativa HOM05D000762 ORTHO05D006179 3.5e-15 84.7 53 71.7
Nn1g09246 Nelumbo nucifera HOM05D000762 ORTHO05D006179 3.5e-15 84.7 53 77.4
Atru.chr6.2127 Acer truncatum HOM05D000762 ORTHO05D006179 4.6e-15 84.3 53 75.5
EL10Ac5g11870 Beta vulgaris HOM05D000762 ORTHO05D006179 4.6e-15 84.3 53 73.6
CANSAT11G0376 Cannabis sativa HOM05D000762 ORTHO05D006179 4.6e-15 84.3 56 69.6
Actinidia30332 Actinidia chinensis HOM05D000762 ORTHO05D006179 6.0e-15 84.0 53 67.9
BcaC07g37754 Brassica carinata HOM05D000762 ORTHO05D006179 6.0e-15 84.0 53 73.6
A08p10520 Brassica napus HOM05D007105 ORTHO05D006179 6.0e-15 84.0 53 73.6
BolC8t48139H Brassica oleracea HOM05D000762 ORTHO05D006179 6.0e-15 84.0 53 73.6
BraA08t33051Z Brassica rapa HOM05D000762 ORTHO05D006179 6.0e-15 84.0 53 73.6
TPR.G30319 Trifolium pratense HOM05D000762 ORTHO05D006179 6.0e-15 84.0 53 69.8
TAR374G0039 Trochodendron aralioides HOM05D000762 ORTHO05D006179 6.0e-15 84.0 53 69.8
BcaB07g32811 Brassica carinata HOM05D000762 ORTHO05D006179 7.9e-15 83.6 51 76.5
Nitab4.5_0001132g0020 Nicotiana tabacum HOM05D000762 ORTHO05D006179 7.9e-15 83.6 65 60.0
AUR62007444 Chenopodium quinoa HOM05D000762 ORTHO05D006179 1.0e-14 83.2 49 79.6
Sp1g27300 Schrenkiella parvula HOM05D000762 ORTHO05D006179 1.0e-14 83.2 53 71.7
AT1G31500 Arabidopsis thaliana HOM05D000762 ORTHO05D006179 1.8e-14 82.4 50 78.0
Ciclev10001424m.g Citrus clementina HOM05D000762 ORTHO05D006179 1.8e-14 82.4 53 71.7
Eucgr.D02578 Eucalyptus grandis HOM05D000762 ORTHO05D006179 1.8e-14 82.4 51 76.5
BcaC05g27179 Brassica carinata HOM05D000762 ORTHO05D006179 2.3e-14 82.0 53 71.7
C05p30750 Brassica napus HOM05D000762 ORTHO05D006179 2.3e-14 82.0 53 71.7
BolC5t31807H Brassica oleracea HOM05D000762 ORTHO05D006179 2.3e-14 82.0 53 71.7
Cc08_g04650 Coffea canephora HOM05D000762 ORTHO05D006179 2.3e-14 82.0 85 49.4
Peaxi162Scf00157g01314 Petunia axillaris HOM05D000762 ORTHO05D006179 3.0e-14 81.6 51 72.5
Solyc08g075010.4 Solanum lycopersicum HOM05D000762 ORTHO05D006179 3.0e-14 81.6 56 64.3
AL1G49550 Arabidopsis lyrata HOM05D000762 ORTHO05D006179 3.9e-14 81.3 53 71.7
MBI04_g30784_MAGBIO Magnolia biondii HOM05D000762 ORTHO05D006179 3.9e-14 81.3 53 67.9
A09p34690 Brassica napus HOM05D000762 ORTHO05D006179 5.1e-14 80.9 53 69.8
Nitab4.5_0002799g0030 Nicotiana tabacum HOM05D000762 ORTHO05D006179 5.1e-14 80.9 67 58.2
Sopen08g023620 Solanum pennellii HOM05D000762 ORTHO05D006179 5.1e-14 80.9 56 64.3
PGSC0003DMG401015717 Solanum tuberosum HOM05D000762 ORTHO05D006179 5.1e-14 80.9 56 64.3
SHI33824 Sapria himalayana HOM05D000762 ORTHO05D006179 6.7e-14 80.5 50 76.0
Hund11080 Selenicereus undatus HOM05D000762 ORTHO05D006179 8.7e-14 80.1 49 75.5
Thhalv10007841m.g Eutrema salsugineum HOM05D000762 ORTHO05D006179 1.1e-13 79.7 53 69.8
Lalb_Chr16g0380531 Lupinus albus HOM05D000762 ORTHO05D006179 1.1e-13 79.7 56 67.9
Duzib114G0367 Durio zibethinus HOM05D000762 ORTHO05D006179 1.5e-13 79.3 53 69.8
Os05g0389500 Oryza sativa ssp. japonica HOM05D000762 ORTHO05D006179 1.9e-13 79.0 53 64.2
CDE11G1126 Ceratophyllum demersum HOM05D000762 ORTHO05D006179 3.3e-13 78.2 56 66.1
unitig_899.g14971 Utricularia gibba HOM05D000351 ORTHO05D006179 1.3e-12 76.3 56 64.3
PSO063G1071 Papaver somniferum HOM05D000762 ORTHO05D006179 1.6e-12 75.9 53 64.2
AagrBONN_evm.TU.Sc2ySwM_344.1125 Anthoceros agrestis HOM05D000762 ORTHO05D006179 3.7e-12 74.7 53 64.2
HPP92_022767 Vanilla planifolia HOM05D000762 ORTHO05D006179 6.2e-12 73.9 56 55.4
Aqoxy3G01997 Aquilegia oxysepala HOM05D000762 ORTHO05D006179 1.4e-11 72.8 81 45.7
ATR0568G206 Amborella trichopoda HOM05D000762 ORTHO05D006179 1.8e-11 72.4 51 60.8
SMO167G0012 Selaginella moellendorffii HOM05D000762 ORTHO05D006179 2.6e-10 68.6 56 55.4
SMO347G0652 Selaginella moellendorffii HOM05D000762 ORTHO05D006179 4.5e-10 67.8 56 55.4
Pp3c22_8300 Physcomitrium patens HOM05D000762 ORTHO05D006179 5.0e-09 64.3 56 48.2
Atru.BG.144.p Acer truncatum HOM05D000762 ORTHO05D006179 1.1e-08 63.2 54 57.4
SHI53217 Sapria himalayana HOM05D000762 ORTHO05D006179 1.4e-08 62.8 51 58.8
SHI53758 Sapria himalayana HOM05D000762 ORTHO05D006179 1.4e-08 62.8 51 58.8
SHI53852 Sapria himalayana HOM05D000762 ORTHO05D006179 1.4e-08 62.8 51 58.8
SHI54089 Sapria himalayana HOM05D000762 ORTHO05D006179 1.4e-08 62.8 51 58.8
CBR_g57848 Chara braunii HOM05D000762 ORTHO05D006179 2.5e-08 62.0 57 45.6
AL1G49510 Arabidopsis lyrata HOM05D000762 ORTHO05D006179 3.5e-07 58.2 54 55.6
SHI33058 Sapria himalayana HOM05D000762 ORTHO05D006179 1.3e-06 56.2 51 54.9
SHI47635 Sapria himalayana HOM05D000762 ORTHO05D006179 1.3e-06 56.2 49 57.1
SHI48355 Sapria himalayana HOM05D000762 ORTHO05D006179 1.3e-06 56.2 49 57.1
AT1G31530 Arabidopsis thaliana HOM05D000762 ORTHO05D006179 8.7e-06 53.5 68 39.7


User provided reference genes

Program Settings