Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 5.0e-51 204.1 102 100.0
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 5.0e-51 204.1 102 100.0
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 4.1e-37 157.9 102 71.6
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 9.1e-37 156.8 102 70.6
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 2.7e-36 155.2 102 70.6
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 5.9e-36 154.1 102 75.5
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 5.9e-36 154.1 102 75.5
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.5e-34 149.4 102 73.5
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 1.5e-34 149.4 102 69.6
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 1.9e-34 149.1 102 69.6
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 1.9e-34 149.1 102 69.6
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 1.2e-33 146.4 104 68.3
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 2.1e-33 145.6 102 65.7
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 3.6e-33 144.8 102 65.7
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 4.7e-33 144.4 102 65.7
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 6.1e-33 144.1 100 68.0
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 8.0e-33 143.7 102 64.7
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 1.4e-32 142.9 104 64.4
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 1.8e-32 142.5 100 63.0
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 1.8e-32 142.5 100 65.0
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 2.3e-32 142.1 102 64.7
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 4.0e-32 141.4 101 66.3
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 4.0e-32 141.4 101 63.4
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 5.2e-32 141.0 102 64.7
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 5.2e-32 141.0 101 62.4
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 6.8e-32 140.6 102 63.7
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 8.8e-32 140.2 104 61.5
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 1.2e-31 139.8 100 65.0
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 1.5e-31 139.4 105 66.7
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 1.5e-31 139.4 105 61.0
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 3.4e-31 138.3 100 65.0
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 5.7e-31 137.5 102 63.7
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 9.8e-31 136.7 103 64.1
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 9.8e-31 136.7 103 63.1
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 1.3e-30 136.3 102 65.7
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 1.3e-30 136.3 106 61.3
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 1.3e-30 136.3 102 63.7
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 2.2e-30 135.6 102 60.8
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 4.8e-30 134.4 102 62.7
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 6.3e-30 134.0 101 62.4
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 2.4e-29 132.1 101 65.3
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 2.4e-29 132.1 101 58.4
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 5.4e-29 131.0 100 62.0
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 7.0e-29 130.6 101 59.4
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 1.2e-28 129.8 102 59.8
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 1.6e-28 129.4 100 59.0
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 1.6e-28 129.4 101 61.4
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 1.6e-28 129.4 110 60.9
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 2.7e-28 128.6 101 64.4
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 2.7e-28 128.6 101 60.4
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 4.5e-28 127.9 102 60.8
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 5.9e-28 127.5 105 61.9
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 5.9e-28 127.5 101 60.4
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 7.7e-28 127.1 101 61.4
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 7.7e-28 127.1 100 61.0
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 1.0e-27 126.7 100 58.0
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 2.9e-27 125.2 102 61.8
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 3.8e-27 124.8 101 58.4
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 5.0e-27 124.4 102 57.8
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 8.6e-27 123.6 101 59.4
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 1.1e-26 123.2 102 61.8
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 5.5e-26 120.9 100 57.0
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 9.5e-26 120.2 100 57.0
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 1.2e-25 119.8 99 58.6
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 1.6e-25 119.4 101 60.4
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 2.8e-25 118.6 82 65.9
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 2.8e-25 118.6 101 59.4
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 2.8e-25 118.6 101 57.4
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 1.0e-24 116.7 102 59.8
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 1.4e-24 116.3 106 55.7
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 4.0e-24 114.8 100 60.0
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 4.0e-24 114.8 106 58.5
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 5.2e-24 114.4 106 58.5
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 8.9e-24 113.6 101 55.4
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.2e-23 113.2 113 54.9
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 1.5e-23 112.8 101 56.4
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 2.0e-23 112.5 101 56.4
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 2.6e-23 112.1 106 57.5
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 9.8e-23 110.2 105 52.4
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 1.3e-22 109.8 100 54.0
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 1.3e-22 109.8 103 57.3
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 4.1e-21 104.8 101 53.5
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 4.1e-21 104.8 101 53.5
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 4.1e-21 104.8 102 48.0
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 1.2e-20 103.2 123 49.6
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 6.6e-19 97.4 101 48.5
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 8.6e-19 97.1 102 53.9
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 8.6e-19 97.1 102 53.9
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 7.3e-18 94.0 103 51.5
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 1.6e-17 92.8 65 63.1
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 3.0e-16 88.6 100 45.0
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 2.9e-14 82.0 74 55.4
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 1.8e-13 79.3 103 41.7
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.6e-12 76.3 89 46.1
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 3.5e-12 75.1 89 44.9
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 5.0e-11 71.2 115 40.9
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 1.5e-10 69.7 96 38.5
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 2.1e-09 65.9 119 34.5
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 1.8e-08 62.8 94 42.6
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 5.8e-07 57.8 102 40.2
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 2.2e-06 55.8 112 34.8


User provided reference genes

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