Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc235.15 Carica papaya HOM05D013188 ORTHO05D009808 7.9e-244 846.7 423 100.0
Cpa.g.sc235.13 Carica papaya HOM05D013188 ORTHO05D009808 9.1e-224 780.0 423 92.7
Cpa.g.sc235.9 Carica papaya HOM05D013188 ORTHO05D009808 8.3e-193 677.2 423 81.8
Cpa.g.c34836 Carica papaya HOM05D013188 ORTHO05D009808 2.0e-162 576.2 343 85.4
Cpa.g.sc235.11 Carica papaya HOM05D013188 ORTHO05D009808 1.8e-131 473.4 393 65.9
Cpa.g.sc235.16 Carica papaya HOM05D013188 ORTHO05D009808 3.3e-96 356.3 329 59.9
Cpa.g.sc235.14 Carica papaya HOM05D013188 ORTHO05D009808 2.1e-79 300.4 160 93.8
Cpa.g.sc1399.1 Carica papaya HOM05D013188 ORTHO05D009808 1.1e-75 288.1 149 94.0
Cpa.g.sc191.1 Carica papaya HOM05D013188 ORTHO05D118810 3.1e-46 190.3 161 61.5
Cpa.g.sc191.2 Carica papaya HOM05D013188 ORTHO05D009808 3.0e-33 147.1 106 67.9
Cpa.g.sc235.17 Carica papaya HOM05D013188 ORTHO05D009808 1.1e-27 128.6 87 72.4
Ciclev10017443m.g Citrus clementina HOM05D013188 ORTHO05D009808 8.5e-20 102.4 451 27.3
THA.LOC104799082 Tarenaya hassleriana HOM05D008053 ORTHO05D009808 7.4e-16 89.4 296 27.0
THA.LOC104811119 Tarenaya hassleriana HOM05D008053 ORTHO05D009808 1.4e-14 85.1 358 26.8
Haze_23012 Corylus avellana HOM05D008053 ORTHO05D009808 6.9e-14 82.8 399 24.8
PGR119G1672 Punica granatum HOM05D008053 ORTHO05D009808 2.6e-13 80.9 85 48.2
Sp3g31950 Schrenkiella parvula HOM05D008053 ORTHO05D009808 2.6e-13 80.9 346 27.7
A07p02220 Brassica napus HOM05D008053 ORTHO05D009808 2.2e-12 77.8 352 27.0
BraA07t28016Z Brassica rapa HOM05D008053 ORTHO05D009808 2.2e-12 77.8 352 27.0
Carub.0008s0673 Capsella rubella HOM05D008053 ORTHO05D009808 2.2e-12 77.8 67 59.7
Thhalv10023174m.g Eutrema salsugineum HOM05D008053 ORTHO05D009808 2.2e-12 77.8 234 30.3
Thhalv10015522m.g Eutrema salsugineum HOM05D008053 ORTHO05D009808 2.9e-12 77.4 67 56.7
Cfa009650 Carpinus fangiana HOM05D008053 ORTHO05D009808 3.8e-12 77.0 80 50.0
Glyma.10G295200 Glycine max HOM05D008053 ORTHO05D009808 3.8e-12 77.0 80 53.8
Sp6g22400 Schrenkiella parvula HOM05D008053 ORTHO05D009808 5.0e-12 76.6 251 28.7
AL3G47500 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 6.5e-12 76.3 80 51.2
Carub.0003s2958 Capsella rubella HOM05D008053 ORTHO05D009808 8.5e-12 75.9 73 52.1
C07p04320 Brassica napus HOM05D008053 ORTHO05D009808 1.4e-11 75.1 338 27.5
Sabra03G0159700 Salix brachista HOM05D008053 ORTHO05D009808 1.4e-11 75.1 305 29.5
A10p18040 Brassica napus HOM05D008053 ORTHO05D009808 2.5e-11 74.3 64 54.7
BraA10t43878Z Brassica rapa HOM05D008053 ORTHO05D009808 2.5e-11 74.3 64 54.7
BolC7t40826H Brassica oleracea HOM05D008053 ORTHO05D009808 3.2e-11 73.9 338 27.5
AL3G51820 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 4.2e-11 73.6 96 47.9
Carub.0004s0856 Capsella rubella HOM05D008053 ORTHO05D009808 7.2e-11 72.8 71 50.7
VMungo0720G0435 Vigna mungo HOM05D008053 ORTHO05D009808 7.2e-11 72.8 121 39.7
AL6G34120 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 9.4e-11 72.4 220 30.9
AT2G18490 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 1.2e-10 72.0 78 51.3
AT2G15740 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 2.1e-10 71.2 71 52.1
BcaB08g36385 Brassica carinata HOM05D008053 ORTHO05D009808 2.1e-10 71.2 69 53.6
Ca_11393_v3 Cicer arietinum L. HOM05D008053 ORTHO05D009808 2.1e-10 71.2 107 40.2
Psat0s3483g0040 Pisum sativum HOM05D008053 ORTHO05D009808 2.1e-10 71.2 73 47.9
AL8G18580 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 2.7e-10 70.9 195 31.8
Cpa.g.sc235.19 Carica papaya HOM05D008053 ORTHO05D009808 2.7e-10 70.9 195 30.3
Ca_11392_v3 Cicer arietinum L. HOM05D008053 ORTHO05D009808 4.7e-10 70.1 178 31.5
Phvul.007G004800 Phaseolus vulgaris HOM05D008053 ORTHO05D009808 4.7e-10 70.1 67 55.2
BcaC06g36419 Brassica carinata HOM05D008053 ORTHO05D009808 6.1e-10 69.7 76 50.0
Lj5g0002040 Lotus japonicus HOM05D008053 ORTHO05D009808 6.1e-10 69.7 90 43.3
CARHR190540 Cardamine hirsuta HOM05D008053 ORTHO05D009808 7.9e-10 69.3 149 32.9
BcaC04g19617 Brassica carinata HOM05D008053 ORTHO05D009808 1.0e-09 68.9 117 40.2
BcaC06g36417 Brassica carinata HOM05D008053 ORTHO05D009808 1.0e-09 68.9 87 44.8
C09p53590 Brassica napus HOM05D008053 ORTHO05D009808 1.0e-09 68.9 117 40.2
BolC9t58235H Brassica oleracea HOM05D008053 ORTHO05D009808 1.0e-09 68.9 117 40.2
AL8G17500 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 1.4e-09 68.6 68 51.5
BcaB03g16634 Brassica carinata HOM05D008053 ORTHO05D009808 1.4e-09 68.6 81 50.6
AT5G22990 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 3.0e-09 67.4 223 28.3
AT5G42640 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 3.0e-09 67.4 145 33.1
CARHR109100 Cardamine hirsuta HOM05D008053 ORTHO05D009808 3.0e-09 67.4 65 53.8
Carub.0006s2076 Capsella rubella HOM05D008053 ORTHO05D009808 3.9e-09 67.0 214 27.6
Carub.0008s0555 Capsella rubella HOM05D008053 ORTHO05D009808 3.9e-09 67.0 59 55.9
Psat6g241760 Pisum sativum HOM05D008053 ORTHO05D009808 3.9e-09 67.0 67 47.8
Medtr3g084720 Medicago truncatula HOM05D008053 ORTHO05D009808 6.7e-09 66.2 126 34.9
Manes.03G090200 Manihot esculenta HOM05D008053 ORTHO05D009808 8.8e-09 65.9 76 48.7
Sc09g0000360 Simmondsia chinensis HOM05D008053 ORTHO05D009808 2.0e-08 64.7 196 31.6
CARHR039750 Cardamine hirsuta HOM05D008053 ORTHO05D009808 2.6e-08 64.3 131 34.4
Thecc.09G217900 Theobroma cacao HOM05D020410 ORTHO05D029866 3.3e-08 63.9 94 40.4
Psat6g240400 Pisum sativum HOM05D008053 ORTHO05D009808 4.4e-08 63.5 117 37.6
Psat6g241800 Pisum sativum HOM05D008053 ORTHO05D009808 9.7e-08 62.4 88 44.3
BcaC06g36418 Brassica carinata HOM05D008053 ORTHO05D009808 1.3e-07 62.0 86 43.0
Atru.chr3.2693 Acer truncatum HOM05D008053 ORTHO05D009808 2.2e-07 61.2 117 35.0
Carub.0003s3265 Capsella rubella HOM05D008053 ORTHO05D009808 4.8e-07 60.1 112 39.3
Psat0s3483g0080 Pisum sativum HOM05D008053 ORTHO05D009808 8.2e-07 59.3 162 32.1
COL.COLO4_10423 Corchorus olitorius HOM05D020410 ORTHO05D009808 3.1e-06 57.4 212 27.8


User provided reference genes

Program Settings