Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc235.11 Carica papaya HOM05D013188 ORTHO05D009808 1.9e-153 545.8 283 100.0
Cpa.g.sc235.15 Carica papaya HOM05D013188 ORTHO05D009808 2.5e-132 475.7 393 65.9
Cpa.g.sc235.13 Carica papaya HOM05D013188 ORTHO05D009808 5.7e-129 464.5 393 64.9
Cpa.g.sc235.16 Carica papaya HOM05D013188 ORTHO05D009808 7.4e-113 411.0 219 90.9
Cpa.g.sc235.9 Carica papaya HOM05D013188 ORTHO05D009808 4.5e-110 401.7 393 57.3
Cpa.g.c34836 Carica papaya HOM05D013188 ORTHO05D009808 1.7e-88 330.1 343 55.7
Cpa.g.sc1399.1 Carica papaya HOM05D013188 ORTHO05D009808 5.4e-79 298.5 149 96.6
Cpa.g.sc235.14 Carica papaya HOM05D013188 ORTHO05D009808 1.2e-54 217.6 131 84.0
Cpa.g.sc191.2 Carica papaya HOM05D013188 ORTHO05D009808 4.5e-33 146.0 106 68.9
Cpa.g.sc191.1 Carica papaya HOM05D013188 ORTHO05D118810 5.1e-29 132.5 131 55.0
Cpa.g.sc235.17 Carica papaya HOM05D013188 ORTHO05D009808 7.4e-28 128.6 87 72.4
Haze_23012 Corylus avellana HOM05D008053 ORTHO05D009808 2.0e-17 94.0 304 29.6
PGR119G1672 Punica granatum HOM05D008053 ORTHO05D009808 3.2e-15 86.7 85 51.8
Ciclev10017443m.g Citrus clementina HOM05D013188 ORTHO05D009808 9.4e-15 85.1 159 39.6
Carub.0008s0673 Capsella rubella HOM05D008053 ORTHO05D009808 6.1e-14 82.4 67 61.2
Cfa009650 Carpinus fangiana HOM05D008053 ORTHO05D009808 1.0e-13 81.6 80 52.5
Thhalv10015522m.g Eutrema salsugineum HOM05D008053 ORTHO05D009808 1.0e-13 81.6 67 58.2
Thhalv10023174m.g Eutrema salsugineum HOM05D008053 ORTHO05D009808 1.4e-13 81.3 81 56.8
THA.LOC104799082 Tarenaya hassleriana HOM05D008053 ORTHO05D009808 1.4e-13 81.3 67 56.7
AL3G47500 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 1.8e-13 80.9 80 51.2
Carub.0003s2958 Capsella rubella HOM05D008053 ORTHO05D009808 1.8e-13 80.9 73 53.4
Glyma.10G295200 Glycine max HOM05D008053 ORTHO05D009808 2.3e-13 80.5 80 55.0
Sabra03G0159700 Salix brachista HOM05D008053 ORTHO05D009808 3.9e-13 79.7 110 41.8
A10p18040 Brassica napus HOM05D008053 ORTHO05D009808 5.1e-13 79.3 64 56.2
BraA10t43878Z Brassica rapa HOM05D008053 ORTHO05D009808 5.1e-13 79.3 64 56.2
AL3G51820 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 1.5e-12 77.8 74 55.4
Carub.0004s0856 Capsella rubella HOM05D008053 ORTHO05D009808 1.5e-12 77.8 71 52.1
CARHR190540 Cardamine hirsuta HOM05D008053 ORTHO05D009808 1.5e-12 77.8 65 55.4
Cpa.g.sc235.19 Carica papaya HOM05D008053 ORTHO05D009808 1.5e-12 77.8 97 42.3
AT2G18490 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 2.5e-12 77.0 78 52.6
BcaC04g19617 Brassica carinata HOM05D008053 ORTHO05D009808 2.5e-12 77.0 64 54.7
C09p53590 Brassica napus HOM05D008053 ORTHO05D009808 2.5e-12 77.0 64 54.7
BolC9t58235H Brassica oleracea HOM05D008053 ORTHO05D009808 2.5e-12 77.0 64 54.7
Sp3g31950 Schrenkiella parvula HOM05D008053 ORTHO05D009808 2.5e-12 77.0 84 53.6
THA.LOC104811119 Tarenaya hassleriana HOM05D008053 ORTHO05D009808 3.3e-12 76.6 80 48.8
AL6G34120 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 4.3e-12 76.3 72 51.4
AT2G15740 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 4.3e-12 76.3 71 53.5
Sp6g22400 Schrenkiella parvula HOM05D008053 ORTHO05D009808 4.3e-12 76.3 78 50.0
AT5G22990 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 7.4e-12 75.5 89 42.7
Carub.0006s2076 Capsella rubella HOM05D008053 ORTHO05D009808 7.4e-12 75.5 80 47.5
VMungo0720G0435 Vigna mungo HOM05D008053 ORTHO05D009808 7.4e-12 75.5 121 40.5
AL8G18580 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 9.7e-12 75.1 71 50.7
BcaB08g36385 Brassica carinata HOM05D008053 ORTHO05D009808 9.7e-12 75.1 69 55.1
BcaC06g36419 Brassica carinata HOM05D008053 ORTHO05D009808 1.3e-11 74.7 74 52.7
Ca_11393_v3 Cicer arietinum L. HOM05D008053 ORTHO05D009808 1.3e-11 74.7 113 39.8
Lj5g0002040 Lotus japonicus HOM05D008053 ORTHO05D009808 1.7e-11 74.3 107 42.1
AL8G17500 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 2.8e-11 73.6 68 52.9
BcaB03g16634 Brassica carinata HOM05D008053 ORTHO05D009808 2.8e-11 73.6 81 51.9
Psat0s3483g0040 Pisum sativum HOM05D008053 ORTHO05D009808 2.8e-11 73.6 73 49.3
BcaC06g36417 Brassica carinata HOM05D008053 ORTHO05D009808 3.7e-11 73.2 100 46.0
C07p04320 Brassica napus HOM05D008053 ORTHO05D009808 4.8e-11 72.8 240 30.0
BolC7t40826H Brassica oleracea HOM05D008053 ORTHO05D009808 4.8e-11 72.8 240 30.0
Ca_11392_v3 Cicer arietinum L. HOM05D008053 ORTHO05D009808 4.8e-11 72.8 87 43.7
Phvul.007G004800 Phaseolus vulgaris HOM05D008053 ORTHO05D009808 4.8e-11 72.8 67 56.7
A07p02220 Brassica napus HOM05D008053 ORTHO05D009808 6.3e-11 72.4 247 32.0
BraA07t28016Z Brassica rapa HOM05D008053 ORTHO05D009808 6.3e-11 72.4 247 32.0
AT5G42640 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 8.2e-11 72.0 76 48.7
Carub.0008s0555 Capsella rubella HOM05D008053 ORTHO05D009808 1.1e-10 71.6 59 57.6
CARHR109100 Cardamine hirsuta HOM05D008053 ORTHO05D009808 1.1e-10 71.6 65 55.4
Manes.03G090200 Manihot esculenta HOM05D008053 ORTHO05D009808 1.8e-10 70.9 76 51.3
Sc09g0000360 Simmondsia chinensis HOM05D008053 ORTHO05D009808 1.8e-10 70.9 110 40.0
Thecc.09G217900 Theobroma cacao HOM05D020410 ORTHO05D029866 3.1e-10 70.1 94 43.6
Psat6g241760 Pisum sativum HOM05D008053 ORTHO05D009808 5.3e-10 69.3 67 49.3
Medtr3g084720 Medicago truncatula HOM05D008053 ORTHO05D009808 9.1e-10 68.6 126 35.7
COL.COLO4_10423 Corchorus olitorius HOM05D020410 ORTHO05D009808 1.2e-09 68.2 88 45.5
Psat6g240400 Pisum sativum HOM05D008053 ORTHO05D009808 1.5e-09 67.8 58 53.4
Atru.chr3.2693 Acer truncatum HOM05D008053 ORTHO05D009808 2.6e-09 67.0 94 43.6
CARHR039750 Cardamine hirsuta HOM05D008053 ORTHO05D009808 2.6e-09 67.0 77 46.8
AUR62019217 Chenopodium quinoa HOM05D000230 ORTHO05D009808 2.6e-09 67.0 99 36.4
Psat6g241800 Pisum sativum HOM05D008053 ORTHO05D009808 2.6e-09 67.0 131 34.4
Psat0s3483g0080 Pisum sativum HOM05D008053 ORTHO05D009808 4.5e-09 66.2 73 52.1
Carub.0003s3265 Capsella rubella HOM05D008053 ORTHO05D009808 1.0e-08 65.1 71 47.9
BcaC06g36418 Brassica carinata HOM05D008053 ORTHO05D009808 1.3e-08 64.7 86 43.0
COL.COLO4_10408 Corchorus olitorius HOM05D020410 ORTHO05D009808 2.2e-08 63.9 145 34.5
Carub.0003s3266 Capsella rubella HOM05D008053 ORTHO05D009808 2.5e-07 60.5 71 45.1
Carub.0003s3268 Capsella rubella HOM05D008053 ORTHO05D009808 2.5e-07 60.5 71 45.1
BolC7t40827H Brassica oleracea HOM05D008053 ORTHO05D009808 1.6e-06 57.8 53 52.8
TPR.G7581 Trifolium pratense HOM05D008053 ORTHO05D009808 1.6e-06 57.8 40 60.0


User provided reference genes

Program Settings