Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 8.4e-197 690.3 372 100.0
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 1.2e-174 616.7 366 90.7
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 3.8e-173 611.7 368 89.7
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 8.4e-173 610.5 366 90.2
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 3.2e-172 608.6 366 89.9
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 4.2e-172 608.2 366 90.2
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 1.2e-171 606.7 368 89.4
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 2.1e-171 605.9 366 89.6
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 2.7e-171 605.5 366 89.3
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 1.3e-170 603.2 368 90.5
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 1.3e-170 603.2 366 89.3
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 1.8e-170 602.8 366 89.1
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 2.3e-170 602.4 365 90.1
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 5.1e-170 601.3 366 88.8
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 6.7e-170 600.9 366 89.6
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 6.7e-170 600.9 366 89.9
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 1.1e-169 600.1 367 88.6
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 3.3e-169 598.6 369 87.5
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 9.6e-169 597.0 366 88.5
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 1.4e-167 593.2 368 88.3
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 1.4e-167 593.2 368 86.4
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 1.4e-167 593.2 368 87.5
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 3.1e-167 592.0 368 87.8
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 1.5e-166 589.7 362 87.6
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 3.4e-166 588.6 366 87.4
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 4.5e-166 588.2 366 88.3
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 1.0e-165 587.0 365 88.5
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 1.3e-165 586.6 366 88.0
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 8.4e-165 583.9 368 87.8
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 3.2e-164 582.0 377 85.4
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 3.2e-164 582.0 368 86.1
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 5.5e-164 581.3 366 86.9
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 2.1e-163 579.3 368 84.8
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 2.7e-163 578.9 366 86.1
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 4.6e-163 578.2 367 86.4
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 6.0e-163 577.8 366 86.3
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 1.0e-162 577.0 366 84.4
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 1.3e-162 576.6 367 85.3
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 5.7e-161 571.2 368 84.5
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 3.1e-159 565.5 363 84.0
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 4.1e-159 565.1 356 86.2
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 4.1e-159 565.1 368 82.6
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 4.1e-159 565.1 355 85.9
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 6.9e-159 564.3 351 86.6
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 9.0e-159 563.9 367 84.2
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 2.0e-158 562.8 367 83.1
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 3.4e-158 562.0 348 86.2
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 7.6e-158 560.8 368 81.8
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 8.5e-157 557.4 366 83.3
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 1.1e-156 557.0 366 85.2
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 2.5e-156 555.8 366 82.0
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.2e-155 553.5 369 82.1
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 2.7e-155 552.4 366 82.0
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.7e-155 552.4 366 82.0
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 4.6e-155 551.6 353 85.3
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 7.9e-155 550.8 369 81.8
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.3e-154 550.1 369 81.3
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 3.0e-154 548.9 370 80.0
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 1.5e-153 546.6 364 81.6
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 1.5e-153 546.6 348 85.1
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 1.5e-153 546.6 368 81.8
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 2.5e-153 545.8 369 81.0
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 5.7e-153 544.7 369 81.3
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 9.7e-153 543.9 364 81.3
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 3.7e-152 542.0 366 82.0
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 4.8e-152 541.6 369 81.8
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 9.0e-151 537.3 399 76.2
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 2.0e-150 536.2 370 78.6
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 1.3e-149 533.5 405 74.3
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 2.2e-149 532.7 369 79.1
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 5.0e-149 531.6 351 82.6
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 5.0e-149 531.6 370 79.7
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 5.0e-149 531.6 370 79.7
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 3.2e-148 528.9 367 77.9
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 5.5e-148 528.1 370 78.6
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 5.5e-148 528.1 351 81.8
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 7.2e-148 527.7 369 79.1
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 2.1e-147 526.2 342 83.0
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 2.7e-147 525.8 371 78.2
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 3.6e-147 525.4 342 83.0
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 6.1e-147 524.6 367 77.4
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 2.3e-146 522.7 361 79.5
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 3.0e-146 522.3 367 77.4
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 3.0e-146 522.3 367 78.2
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 1.3e-144 516.9 348 80.2
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 2.2e-144 516.2 355 80.0
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 4.8e-144 515.0 371 76.3
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 4.1e-143 511.9 366 79.5
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 5.3e-143 511.5 332 85.8
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.7e-141 506.5 366 76.5
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 8.5e-141 504.2 351 78.9
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 3.2e-140 502.3 366 75.7
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 7.2e-140 501.1 356 78.9
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 7.2e-140 501.1 366 75.4
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 3.6e-139 498.8 353 76.5
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 3.6e-139 498.8 360 76.9
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 7.9e-139 497.7 360 75.3
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 1.0e-138 497.3 344 79.1
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 1.8e-138 496.5 366 74.0
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 3.9e-138 495.4 300 92.0
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 5.7e-137 491.5 358 76.8
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 7.4e-137 491.1 374 75.1
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 1.4e-135 486.9 354 77.1
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 3.5e-134 482.3 366 73.8
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 5.9e-134 481.5 363 74.7
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 2.9e-133 479.2 344 76.5
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 3.8e-133 478.8 368 72.6
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 5.0e-133 478.4 367 73.0
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 1.9e-132 476.5 344 76.5
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 3.2e-132 475.7 351 74.9
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 7.2e-132 474.6 367 73.3
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 7.2e-132 474.6 367 73.3
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 6.1e-131 471.5 367 71.7
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 2.2e-128 463.0 362 69.3
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 9.1e-127 457.6 353 70.8
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 3.0e-122 442.6 331 73.7
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 4.4e-121 438.7 345 67.8
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 7.5e-121 438.0 345 71.9
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 2.0e-118 429.9 268 86.9
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 5.9e-118 428.3 276 86.2
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 5.9e-118 428.3 341 66.6
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 1.3e-117 427.2 379 67.0
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 7.2e-116 421.4 292 81.5
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 1.4e-111 407.1 369 65.3
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 1.8e-111 406.8 268 83.2
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.8e-111 406.8 359 63.0
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 4.5e-110 402.1 287 78.0
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 1.7e-109 400.2 329 65.7
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.9e-109 399.4 315 67.3
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 1.4e-106 390.6 359 60.7
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 5.7e-105 385.2 352 60.2
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 2.2e-104 383.3 270 78.5
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 4.1e-103 379.0 306 72.9
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.0e-102 376.7 368 58.2
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 4.3e-100 369.0 218 92.7
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 1.9e-95 353.6 287 69.3
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 1.1e-92 344.4 344 56.1
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 4.1e-87 325.9 264 74.6
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 5.4e-71 272.3 172 85.5
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 8.2e-51 205.3 125 88.8
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 7.6e-49 198.7 143 73.4
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 3.0e-45 186.8 121 84.3
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 9.0e-42 175.3 131 78.6
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.7e-40 171.0 120 80.0
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 8.5e-32 142.1 97 79.4
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 4.4e-28 129.8 105 68.6
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 7.4e-28 129.0 79 77.2
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 9.7e-28 128.6 70 84.3
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 2.4e-26 124.0 81 84.0
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 3.1e-26 123.6 113 59.3
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 8.5e-24 115.5 98 58.2
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 2.8e-19 100.5 81 71.6
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 6.3e-19 99.4 130 50.0
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 1.1e-18 98.6 58 94.8
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 2.6e-17 94.0 54 96.3
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 2.2e-16 90.9 93 58.1
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 8.0e-14 82.4 97 54.6
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 2.0e-12 77.8 75 52.0
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 2.6e-12 77.4 42 90.5
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 7.5e-12 75.9 134 44.0
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 1.7e-11 74.7 57 75.4
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 1.8e-10 71.2 297 25.9
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 1.3e-08 65.1 38 94.7
MCO09G810 Micromonas commoda HOM05D004327 ORTHO05D005032 2.9e-08 63.9 163 28.8
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 1.9e-07 61.2 78 47.4


User provided reference genes

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