Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc233.5 Carica papaya HOM05D018436 ORTHO05D008524 9.1e-92 340.5 208 100.0
Atru.chr7.612 Acer truncatum HOM05D007262 ORTHO05D008524 2.4e-12 76.6 122 41.0
Thecc.09G176700 Theobroma cacao HOM05D018436 ORTHO05D025173 7.1e-12 75.1 111 40.5
CiPaw.07G192600 Carya illinoinensis HOM05D007262 ORTHO05D008524 1.8e-10 70.5 96 46.9
CiPaw.08G035900 Carya illinoinensis HOM05D007262 ORTHO05D008524 2.3e-10 70.1 121 41.3
Potri.006G167300 Populus trichocarpa HOM05D007262 ORTHO05D008524 3.0e-10 69.7 102 41.2
Sabra06G0129200 Salix brachista HOM05D007262 ORTHO05D008524 6.7e-10 68.6 102 42.2
Ciclev10009553m.g Citrus clementina HOM05D007262 ORTHO05D008524 8.7e-10 68.2 116 37.9
Gohir.D13G216200 Gossypium hirsutum HOM05D007262 ORTHO05D008524 1.1e-09 67.8 133 36.1
Gorai.013G246500 Gossypium raimondii HOM05D007262 ORTHO05D008524 1.9e-09 67.0 130 36.9
Potri.018G091900 Populus trichocarpa HOM05D007262 ORTHO05D008524 3.3e-09 66.2 104 41.3
CSS0001479 Camellia sinensis var. sinensis HOM05D007262 ORTHO05D008524 4.3e-09 65.9 112 34.8
Duzib128G1044 Durio zibethinus HOM05D015664 ORTHO05D008524 4.3e-09 65.9 139 36.7
Gohir.A13G212100 Gossypium hirsutum HOM05D007262 ORTHO05D008524 4.3e-09 65.9 130 36.2
Gohir.D08G093600 Gossypium hirsutum HOM05D018436 ORTHO05D025173 5.6e-09 65.5 109 37.6
Gorai.004G099200 Gossypium raimondii HOM05D018436 ORTHO05D025173 5.6e-09 65.5 109 37.6
MD13G1252900 Malus domestica HOM05D007262 ORTHO05D008524 5.6e-09 65.5 130 37.7
Ciclev10010707m.g Citrus clementina HOM05D007262 ORTHO05D008524 7.4e-09 65.1 105 36.2
COL.COLO4_28647 Corchorus olitorius HOM05D015664 ORTHO05D008524 1.3e-08 64.3 129 35.7
TAR383G0997 Trochodendron aralioides HOM05D007262 ORTHO05D008524 1.3e-08 64.3 123 35.8
Thecc.09G176800 Theobroma cacao HOM05D007262 ORTHO05D008524 1.6e-08 63.9 101 42.6
COL.COLO4_37717 Corchorus olitorius HOM05D007262 ORTHO05D008524 2.1e-08 63.5 81 44.4
Hma1.2p1_0900F.1_g234550 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 2.1e-08 63.5 129 34.1
MD16G1257400 Malus domestica HOM05D007262 ORTHO05D008524 2.1e-08 63.5 130 37.7
Gohir.A08G084000 Gossypium hirsutum HOM05D018436 ORTHO05D025173 2.8e-08 63.2 124 36.3
Dinv41243 Davidia involucrata HOM05D007262 ORTHO05D008524 3.7e-08 62.8 87 41.4
Cfa013501 Carpinus fangiana HOM05D007262 ORTHO05D008524 4.8e-08 62.4 106 38.7
Sabra18G0078900 Salix brachista HOM05D007262 ORTHO05D008524 4.8e-08 62.4 83 48.2
TWI34G1693 Tripterygium wilfordii HOM05D007262 ORTHO05D008524 4.8e-08 62.4 98 37.8
Nitab4.5_0012916g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 8.1e-08 61.6 88 38.6
Manes.14G154200 Manihot esculenta HOM05D007262 ORTHO05D008524 1.8e-07 60.5 121 34.7
Nitab4.5_0007075g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 1.8e-07 60.5 88 38.6
Peaxi162Scf00231g00727 Petunia axillaris HOM05D007262 ORTHO05D008524 1.8e-07 60.5 68 41.2
Aa31LG3G13290 Aethionema arabicum HOM05D007262 ORTHO05D008524 2.4e-07 60.1 93 39.8
RcHm_v2.0_Chr4g0402361 Rosa chinensis HOM05D007262 ORTHO05D008524 2.4e-07 60.1 103 36.9
MELO3C004021.2 Cucumis melo HOM05D007262 ORTHO05D008524 5.3e-07 58.9 86 41.9
PGR044G1778 Punica granatum HOM05D007262 ORTHO05D008524 5.3e-07 58.9 70 47.1
SalBow6G4300 Salvia bowleyana HOM05D007262 ORTHO05D008524 6.9e-07 58.5 93 39.8
Haze_22091 Corylus avellana HOM05D007262 ORTHO05D008524 9.0e-07 58.2 99 37.4
COL.COLO4_32474 Corchorus olitorius HOM05D018436 ORTHO05D025173 1.2e-06 57.8 90 37.8
THA.LOC104811785 Tarenaya hassleriana HOM05D007262 ORTHO05D008524 1.2e-06 57.8 78 43.6
COL.COLO4_37718 Corchorus olitorius HOM05D018436 ORTHO05D008524 2.0e-06 57.0 96 37.5
Sabra18G0079000 Salix brachista HOM05D007262 ORTHO05D008524 2.0e-06 57.0 78 43.6
Sc08g0005310 Simmondsia chinensis HOM05D007262 ORTHO05D008524 2.6e-06 56.6 111 35.1
Ah.14g083780 Amaranthus hybridus HOM05D007262 ORTHO05D008524 3.4e-06 56.2 69 46.4
Hma1.2p1_1025F.1_g249350 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 3.4e-06 56.2 85 38.8
Lsat_1_v5_gn_7_54640 Lactuca sativa HOM05D007262 ORTHO05D008524 4.5e-06 55.8 102 36.3
CsaV3_1G031620 Cucumis sativus L. HOM05D007262 ORTHO05D008524 5.8e-06 55.5 103 39.8
Prupe.1G085200 Prunus persica HOM05D007262 ORTHO05D008524 7.6e-06 55.1 92 39.1
CsaV3_1G031630 Cucumis sativus L. HOM05D015664 ORTHO05D008524 9.9e-06 54.7 111 32.4
HanXRQChr11g0322411 Helianthus annuus HOM05D007262 ORTHO05D008524 9.9e-06 54.7 109 33.9


User provided reference genes

Program Settings