Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc232.7 Carica papaya HOM05D000846 ORTHO05D011326 5.3e-66 254.2 128 100.0
Cpa.g.sc39.49 Carica papaya HOM05D000846 ORTHO05D006755 5.3e-58 227.6 113 100.0
MELO3C019464.2 Cucumis melo HOM05D000846 ORTHO05D006755 1.3e-53 213.0 113 92.9
CsaV3_3G019110 Cucumis sativus L. HOM05D000846 ORTHO05D006755 1.3e-53 213.0 113 92.9
ClCG05G009620 Citrullus lanatus HOM05D000846 ORTHO05D006755 1.8e-53 212.6 113 93.8
vmacro19885 Vaccinium macrocarpon HOM05D000846 ORTHO05D006755 3.9e-53 211.5 117 88.9
FvH4_5g29150 Fragaria vesca HOM05D000846 ORTHO05D006755 1.1e-52 209.9 113 91.2
FAN08G3691 Fragaria x ananassa HOM05D000846 ORTHO05D006755 1.1e-52 209.9 113 91.2
FAN18G2713 Fragaria x ananassa HOM05D000846 ORTHO05D006755 1.1e-52 209.9 113 91.2
Sed0025663 Sechium edule HOM05D000846 ORTHO05D006755 1.9e-52 209.1 113 93.8
FAN04G0084 Fragaria x ananassa HOM05D000846 ORTHO05D006755 2.5e-52 208.8 113 90.3
Dinv19375 Davidia involucrata HOM05D000846 ORTHO05D006755 5.7e-52 207.6 114 92.1
Potri.010G169800 Populus trichocarpa HOM05D000846 ORTHO05D006755 5.7e-52 207.6 113 91.2
GSVIVG01022879001 Vitis vinifera HOM05D000846 ORTHO05D006755 5.7e-52 207.6 113 91.2
Prupe.1G571100 Prunus persica HOM05D000846 ORTHO05D006755 9.6e-52 206.8 113 91.2
RcHm_v2.0_Chr7g0221821 Rosa chinensis HOM05D000846 ORTHO05D006755 1.3e-51 206.5 113 90.3
THA.LOC104805711 Tarenaya hassleriana HOM05D000846 ORTHO05D006755 1.6e-51 206.1 113 88.5
Thecc.02G295900 Theobroma cacao HOM05D000846 ORTHO05D006755 2.1e-51 205.7 113 91.2
EL10Ac6g13093 Beta vulgaris HOM05D000846 ORTHO05D006755 8.2e-51 203.8 114 89.5
MD15G1425400 Malus domestica HOM05D000846 ORTHO05D006755 8.2e-51 203.8 113 89.4
Sabra10G0129600 Salix brachista HOM05D000846 ORTHO05D006755 8.2e-51 203.8 113 89.4
TAR381G0552 Trochodendron aralioides HOM05D000846 ORTHO05D006755 8.2e-51 203.8 114 90.4
Cfa005511 Carpinus fangiana HOM05D000846 ORTHO05D006755 1.1e-50 203.4 113 89.4
MD08G1234100 Malus domestica HOM05D000846 ORTHO05D006755 1.1e-50 203.4 113 88.5
Nitab4.5_0000816g0070 Nicotiana tabacum HOM05D000846 ORTHO05D006755 1.1e-50 203.4 114 90.4
Potri.008G085800 Populus trichocarpa HOM05D000846 ORTHO05D006755 1.1e-50 203.4 113 88.5
Rhsim05G0119700 Rhododendron simsii HOM05D000846 ORTHO05D006755 1.1e-50 203.4 113 88.5
Haze_01712 Corylus avellana HOM05D000846 ORTHO05D006755 1.4e-50 203.0 113 89.4
Gohir.A05G308500 Gossypium hirsutum HOM05D000846 ORTHO05D006755 1.4e-50 203.0 113 90.3
Gohir.D05G309200 Gossypium hirsutum HOM05D000846 ORTHO05D006755 1.4e-50 203.0 113 90.3
Gorai.009G329500 Gossypium raimondii HOM05D000846 ORTHO05D006755 1.4e-50 203.0 113 90.3
Manes.03G080600 Manihot esculenta HOM05D000846 ORTHO05D006755 1.4e-50 203.0 113 90.3
Oeu008902.1 Olea europaea HOM05D000846 ORTHO05D006755 1.4e-50 203.0 114 88.6
QL02p099167 Quercus lobata HOM05D000846 ORTHO05D006755 1.4e-50 203.0 113 89.4
CAN.G798.7 Capsicum annuum HOM05D000846 ORTHO05D006755 1.8e-50 202.6 114 88.6
FAN13G1889 Fragaria x ananassa HOM05D000846 ORTHO05D006755 1.8e-50 202.6 113 89.4
MSTRG.16514 Avicennia marina HOM05D000846 ORTHO05D006755 2.4e-50 202.2 114 87.7
Glyma.08G187000 Glycine max HOM05D000846 ORTHO05D006755 2.4e-50 202.2 113 90.3
Peaxi162Scf00011g00530 Petunia axillaris HOM05D000846 ORTHO05D006755 2.4e-50 202.2 114 89.5
Peaxi162Scf00017g02641 Petunia axillaris HOM05D000846 ORTHO05D006755 2.4e-50 202.2 114 89.5
DCAR_001823 Daucus carota HOM05D000846 ORTHO05D006755 3.1e-50 201.8 114 88.6
Duzib251G0663 Durio zibethinus HOM05D000846 ORTHO05D006755 3.1e-50 201.8 113 88.5
SGA_v2.0_scaffold110G31332 Striga asiatica HOM05D000846 ORTHO05D006755 3.1e-50 201.8 114 87.7
Hund15507 Selenicereus undatus HOM05D000846 ORTHO05D006755 4.1e-50 201.4 114 89.5
MBI01_g09375_MAGBIO Magnolia biondii HOM05D000846 ORTHO05D006755 5.3e-50 201.1 114 86.8
Solyc01g104070.3 Solanum lycopersicum HOM05D000846 ORTHO05D006755 5.3e-50 201.1 114 87.7
Atru.chr11.1221 Acer truncatum HOM05D000846 ORTHO05D006755 6.9e-50 200.7 113 88.5
Nitab4.5_0010336g0020 Nicotiana tabacum HOM05D000846 ORTHO05D006755 6.9e-50 200.7 114 88.6
Nn1g08833 Nelumbo nucifera HOM05D000846 ORTHO05D006755 9.0e-50 200.3 114 87.7
COL.COLO4_27511 Corchorus olitorius HOM05D000846 ORTHO05D006755 1.2e-49 199.9 112 89.3
Phvul.006G215200 Phaseolus vulgaris HOM05D000846 ORTHO05D006755 1.2e-49 199.9 113 88.5
Sopen01g046480 Solanum pennellii HOM05D000846 ORTHO05D006755 1.2e-49 199.9 114 86.8
AUR62026527 Chenopodium quinoa HOM05D000846 ORTHO05D006755 1.5e-49 199.5 114 86.8
ECA240G4115 Erigeron canadensis HOM05D000846 ORTHO05D006755 1.5e-49 199.5 114 86.0
PGSC0003DMG400023766 Solanum tuberosum HOM05D000846 ORTHO05D006755 1.5e-49 199.5 114 86.8
CiPaw.06G146600 Carya illinoinensis HOM05D000846 ORTHO05D006755 2.0e-49 199.1 113 88.5
AUR62026329 Chenopodium quinoa HOM05D000846 ORTHO05D006755 2.0e-49 199.1 114 86.8
Nn5g28327 Nelumbo nucifera HOM05D000846 ORTHO05D006755 2.6e-49 198.7 114 86.0
Migut.B00826 Erythranthe guttata HOM05D000846 ORTHO05D006755 3.4e-49 198.4 114 86.8
Thhalv10024293m.g Eutrema salsugineum HOM05D000846 ORTHO05D006755 3.4e-49 198.4 113 84.1
Lsat_1_v5_gn_9_118641 Lactuca sativa HOM05D000846 ORTHO05D006755 3.4e-49 198.4 114 86.8
Cc02_g22620 Coffea canephora HOM05D000846 ORTHO05D006755 4.5e-49 198.0 114 86.8
Lj6g0026631 Lotus japonicus HOM05D000846 ORTHO05D006755 4.5e-49 198.0 113 88.5
BcaC06g32677 Brassica carinata HOM05D000846 ORTHO05D006755 5.8e-49 197.6 113 85.0
HanXRQChr03g0073611 Helianthus annuus HOM05D000846 ORTHO05D006755 5.8e-49 197.6 115 85.2
PSO170G2918 Papaver somniferum HOM05D000846 ORTHO05D006755 5.8e-49 197.6 114 86.8
PSO528G0036 Papaver somniferum HOM05D000846 ORTHO05D006755 5.8e-49 197.6 114 86.8
Aqoxy6G00235 Aquilegia oxysepala HOM05D000846 ORTHO05D006755 7.6e-49 197.2 114 84.2
Lalb_Chr20g0123491 Lupinus albus HOM05D000846 ORTHO05D006755 7.6e-49 197.2 113 88.5
VMungo0540G0381 Vigna mungo HOM05D000846 ORTHO05D006755 7.6e-49 197.2 113 86.7
Eucgr.I02730 Eucalyptus grandis HOM05D000846 ORTHO05D006755 1.0e-48 196.8 113 85.8
Sp7g25600 Schrenkiella parvula HOM05D000846 ORTHO05D006755 2.9e-48 195.3 113 84.1
AL7G25080 Arabidopsis lyrata HOM05D000846 ORTHO05D006755 3.8e-48 194.9 113 85.0
EL10Ac9g22362 Beta vulgaris HOM05D000846 ORTHO05D006755 3.8e-48 194.9 114 85.1
A03p57390 Brassica napus HOM05D000846 ORTHO05D006755 3.8e-48 194.9 113 84.1
C07p55610 Brassica napus HOM05D000846 ORTHO05D006755 3.8e-48 194.9 113 84.1
BolC7t46041H Brassica oleracea HOM05D000846 ORTHO05D006755 3.8e-48 194.9 113 84.1
BraA03t14805Z Brassica rapa HOM05D000846 ORTHO05D006755 3.8e-48 194.9 113 84.1
Aa31LG9G17870 Aethionema arabicum HOM05D000846 ORTHO05D006755 6.5e-48 194.1 113 84.1
AT4G27640 Arabidopsis thaliana HOM05D000846 ORTHO05D006755 6.5e-48 194.1 113 85.0
Glyma.15G046000 Glycine max HOM05D000846 ORTHO05D006755 6.5e-48 194.1 113 87.6
Ah.03g132090 Amaranthus hybridus HOM05D000846 ORTHO05D006755 1.1e-47 193.4 114 86.8
PGR142G3343 Punica granatum HOM05D000846 ORTHO05D006755 2.5e-47 192.2 113 84.1
Sc07g0004850 Simmondsia chinensis HOM05D000846 ORTHO05D006755 3.2e-47 191.8 114 84.2
CARHR235340 Cardamine hirsuta HOM05D000846 ORTHO05D006755 7.1e-47 190.7 113 82.3
Ciclev10030583m.g Citrus clementina HOM05D000846 ORTHO05D006755 7.1e-47 190.7 113 85.0
Medtr2g006750 Medicago truncatula HOM05D000846 ORTHO05D006755 7.1e-47 190.7 113 85.0
Carub.0007s1321 Capsella rubella HOM05D000846 ORTHO05D006755 1.2e-46 189.9 113 82.3
Psat1g221240 Pisum sativum HOM05D000846 ORTHO05D006755 1.2e-46 189.9 113 84.1
Ca_00067_v3 Cicer arietinum L. HOM05D000846 ORTHO05D006755 1.6e-46 189.5 113 84.1
TPR.G2061 Trifolium pratense HOM05D000846 ORTHO05D006755 1.6e-46 189.5 113 84.1
BcaC09g50565 Brassica carinata HOM05D000846 ORTHO05D006755 6.1e-46 187.6 113 83.2
A01p18930 Brassica napus HOM05D000846 ORTHO05D006755 6.1e-46 187.6 113 83.2
C01p23880 Brassica napus HOM05D000846 ORTHO05D006755 6.1e-46 187.6 113 83.2
BolC1t02333H Brassica oleracea HOM05D000846 ORTHO05D006755 6.1e-46 187.6 113 83.2
BraA01t01834Z Brassica rapa HOM05D000846 ORTHO05D006755 6.1e-46 187.6 113 83.2
Zm00001eb011450 Zea mays HOM05D000846 ORTHO05D006755 1.0e-45 186.8 113 82.3
BcaNung01650 Brassica carinata HOM05D000846 ORTHO05D006755 5.1e-45 184.5 113 81.4
ATR0665G276 Amborella trichopoda HOM05D000846 ORTHO05D006755 1.5e-44 183.0 114 81.6
CSS0000492 Camellia sinensis var. sinensis HOM05D000846 ORTHO05D006755 2.8e-43 178.7 123 79.7
SEGI_41093 Sequoiadendron giganteum HOM05D000846 ORTHO05D006755 8.2e-43 177.2 114 76.3
HPP92_009356 Vanilla planifolia HOM05D000846 ORTHO05D006755 1.8e-42 176.0 113 75.2
Lsat_1_v5_gn_7_78561 Lactuca sativa HOM05D000846 ORTHO05D006755 1.1e-39 166.8 120 70.8
Mapoly0029s0100 Marchantia polymorpha HOM05D000846 ORTHO05D006755 2.3e-37 159.1 116 69.8
AagrBONN_evm.TU.Sc2ySwM_228.251 Anthoceros agrestis HOM05D000846 ORTHO05D006755 3.3e-36 155.2 114 67.5
FvH4_4g09591 Fragaria vesca HOM05D000003 ORTHO05D000004 9.7e-36 153.7 86 88.4
ECA236G1359 Erigeron canadensis HOM05D000846 ORTHO05D006755 1.7e-35 152.9 114 69.3
Actinidia39034 Actinidia chinensis HOM05D000846 ORTHO05D006755 2.8e-35 152.1 120 70.0
HanXRQChr16g0511911 Helianthus annuus HOM05D000846 ORTHO05D006755 1.2e-33 146.7 116 66.4
Pp3c4_7610 Physcomitrium patens HOM05D000846 ORTHO05D006755 1.0e-32 143.7 116 66.4
SMO364G0838 Selaginella moellendorffii HOM05D000846 ORTHO05D006755 2.1e-30 136.0 116 59.5
SHI37023 Sapria himalayana HOM05D000846 ORTHO05D006755 4.7e-30 134.8 214 42.1
unitig_21.g20912 Utricularia gibba HOM05D000846 ORTHO05D006755 5.1e-29 131.3 89 73.0
CBR_g3136 Chara braunii HOM05D000846 ORTHO05D006755 3.7e-27 125.2 119 56.3
Lsat_1_v5_gn_7_78760 Lactuca sativa HOM05D008357 ORTHO05D011326 4.0e-21 105.1 81 69.1
FvH4_6g21440 Fragaria vesca HOM05D000846 ORTHO05D011326 5.2e-21 104.8 56 91.1
SEGI_07347 Sequoiadendron giganteum HOM05D000846 ORTHO05D011326 2.3e-13 79.3 73 60.3
Cre12.g490850 Chlamydomonas reinhardtii HOM05D000846 ORTHO05D006755 2.0e-12 76.3 113 42.5
Nn3g17031 Nelumbo nucifera HOM05D000846 ORTHO05D006755 4.4e-12 75.1 69 62.3
MCO06G140 Micromonas commoda HOM05D000846 ORTHO05D006755 5.4e-10 68.2 120 36.7
Lsat_1_v5_gn_7_25540 Lactuca sativa HOM05D001886 ORTHO05D005666 8.0e-06 54.3 37 62.2


User provided reference genes

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