Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc232.2 Carica papaya HOM05D000002 ORTHO05D000047 7.7e-58 226.9 110 100.0
Cpa.g.sc67.4 Carica papaya HOM05D000002 ORTHO05D000047 9.8e-37 156.8 184 48.9
Cpa.g.sc29.27 Carica papaya HOM05D000002 ORTHO05D000047 4.3e-32 141.4 156 51.9
Cpa.g.sc20.50 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-27 125.6 69 85.5
Cpa.g.sc44.5 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-26 123.2 184 44.0
Cpa.g.sc63.36 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-23 112.1 182 36.8
Cpa.g.sc23.134 Carica papaya HOM05D000002 ORTHO05D000047 4.7e-23 111.3 147 41.5
Cpa.g.sc30.156 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-22 109.4 116 51.7
Cpa.g.sc68.34 Carica papaya HOM05D000002 ORTHO05D000047 5.2e-22 107.8 61 80.3
Cpa.g.sc608.3 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-21 106.3 183 35.0
Cpa.g.sc12.50 Carica papaya HOM05D000002 ORTHO05D000047 7.1e-19 97.4 143 37.8
Cpa.g.sc73.41 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-18 96.7 66 63.6
Cpa.g.sc126.7 Carica papaya HOM05D000002 ORTHO05D000047 4.6e-18 94.7 66 62.1
Cpa.g.sc67.42 Carica papaya HOM05D000002 ORTHO05D000047 6.0e-18 94.4 67 58.2
Cpa.g.sc86.67 Carica papaya HOM05D000002 ORTHO05D000047 6.0e-18 94.4 68 63.2
Cpa.g.sc34.189 Carica papaya HOM05D000002 ORTHO05D000047 7.8e-18 94.0 67 61.2
Cpa.g.sc94.33 Carica papaya HOM05D000002 ORTHO05D000047 7.8e-18 94.0 177 37.9
Cpa.g.sc11.108 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-17 93.6 72 56.9
Cpa.g.sc1241.3 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-17 93.2 77 57.1
Cpa.g.sc2.306 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-17 93.2 168 37.5
Cpa.g.sc95.11 Carica papaya HOM05D002228 ORTHO05D002347 1.7e-17 92.8 77 55.8
Cpa.g.sc301.4 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-17 92.4 77 54.5
Cpa.g.sc168.5 Carica papaya HOM05D000002 ORTHO05D000047 5.1e-17 91.3 67 59.7
Cpa.g.sc56.27 Carica papaya HOM05D000002 ORTHO05D000047 6.6e-17 90.9 77 57.1
Cpa.g.sc176.6 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-16 90.1 77 50.6
Cpa.g.sc30.24 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-16 89.7 77 53.2
Cpa.g.sc272.7 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-16 89.4 68 58.8
Cpa.g.sc1639.1 Carica papaya HOM05D000002 ORTHO05D000047 3.3e-16 88.6 137 38.7
Cpa.g.sc31.105 Carica papaya HOM05D000002 ORTHO05D000047 3.3e-16 88.6 68 55.9
Cpa.g.sc118.39 Carica papaya HOM05D000002 ORTHO05D000047 5.6e-16 87.8 66 63.6
Cpa.g.sc21.143 Carica papaya HOM05D000002 ORTHO05D000047 5.6e-16 87.8 68 57.4
Cpa.g.sc22.53 Carica papaya HOM05D000002 ORTHO05D000047 5.6e-16 87.8 141 38.3
Cpa.g.sc43.142 Carica papaya HOM05D000002 ORTHO05D000047 5.6e-16 87.8 67 55.2
Cpa.g.sc67.66 Carica papaya HOM05D000002 ORTHO05D000047 9.6e-16 87.0 64 59.4
Cpa.g.sc67.87 Carica papaya HOM05D000002 ORTHO05D000047 9.6e-16 87.0 72 52.8
Cpa.g.sc5.114 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-15 86.3 77 50.6
Hma1.2p1_0247F.1_g101820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-15 85.5 107 41.1
Cpa.g.sc138.9 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-15 85.1 68 57.4
Cpa.g.sc5.32 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-15 85.1 68 52.9
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 4.7e-15 84.7 76 50.0
Cpa.g.sc96.23 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-14 83.2 68 52.9
Cpa.g.sc191.10 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-14 82.4 82 52.4
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.9e-14 80.9 71 50.7
Cpa.g.sc63.40 Carica papaya HOM05D000002 ORTHO05D000047 9.0e-14 80.5 62 61.3
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.0e-14 80.5 71 47.9
Cpa.g.sc96.44 Carica papaya HOM05D000002 ORTHO05D000047 2.0e-13 79.3 70 50.0
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 2.6e-13 79.0 67 52.2
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.6e-13 79.0 71 47.9
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.6e-13 79.0 71 47.9
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.6e-13 79.0 69 52.2
Atru.chr9.342 Acer truncatum HOM05D000002 ORTHO05D000047 3.4e-13 78.6 65 55.4
Cpa.g.sc18.126 Carica papaya HOM05D000002 ORTHO05D000047 4.4e-13 78.2 107 38.3
Cpa.g.sc91.54 Carica papaya HOM05D000002 ORTHO05D000047 5.8e-13 77.8 44 79.5
Cpa.g.sc54.39 Carica papaya HOM05D000002 ORTHO05D000047 7.6e-13 77.4 77 45.5
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.6e-13 77.4 71 45.1
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.9e-13 77.0 68 47.1
Cpa.g.sc44.107 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-12 76.6 68 47.1
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-12 76.3 77 42.9
Cpa.g.sc118.36 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-12 75.5 165 30.3
Cpa.g.sc10.7 Carica papaya HOM05D000002 ORTHO05D000047 3.8e-12 75.1 69 53.6
Cpa.g.sc867.1 Carica papaya HOM05D000002 ORTHO05D000047 3.8e-12 75.1 128 37.5
Hma1.2p1_1841F.1_g304990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.8e-12 75.1 68 47.1
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 8.4e-12 73.9 77 48.1
Cpa.g.sc284.12 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-11 73.2 41 78.0
Cpa.g.sc7.141 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-11 73.2 49 73.5
Cpa.g.sc49.88 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-11 72.8 41 80.5
Atru.chr3.2506 Acer truncatum HOM05D000002 ORTHO05D000047 2.4e-11 72.4 69 46.4
Cpa.g.sc102.25 Carica papaya HOM05D007148 ORTHO05D009047 2.4e-11 72.4 140 37.1
Cpa.g.sc103.51 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-11 72.4 41 82.9
Cpa.g.sc520.2 Carica papaya HOM05D002370 ORTHO05D003878 3.2e-11 72.0 39 84.6
Hma1.2p1_0421F.1_g149900 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.2e-11 71.6 143 31.5
Atru.chr11.465 Acer truncatum HOM05D000002 ORTHO05D000047 7.1e-11 70.9 67 47.8
Cpa.g.sc153.13 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-10 70.1 165 29.1
Eucgr.B01039 Eucalyptus grandis HOM05D000002 ORTHO05D000047 1.6e-10 69.7 61 54.1
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-10 69.3 77 41.6
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-10 68.9 66 47.0
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.7e-10 68.9 66 47.0
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-10 68.9 66 47.0
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-10 68.9 66 47.0
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-10 68.9 66 47.0
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.7e-10 68.9 66 47.0
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-10 68.9 66 47.0
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.7e-10 68.9 66 47.0
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 4.6e-10 68.2 68 41.2
Cpa.g.sc150.60 Carica papaya HOM05D000002 ORTHO05D000047 6.0e-10 67.8 39 76.9
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.0e-10 67.8 71 39.4
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 6.0e-10 67.8 68 39.7
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-10 67.4 66 45.5
Cpa.g.sc25.135 Carica papaya HOM05D000002 ORTHO05D000047 7.8e-10 67.4 49 61.2
CSS0003806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-09 67.0 66 45.5
CSS0004509 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-09 67.0 66 45.5
CSS0005779 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-09 67.0 66 45.5
CSS0005870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-09 67.0 66 45.5
CSS0006173 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-09 67.0 66 45.5
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-09 67.0 66 45.5
CSS0008635 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-09 67.0 66 45.5
CSS0014620 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-09 67.0 66 45.5
CSS0015126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-09 67.0 66 45.5
CSS0024888 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-09 67.0 66 45.5
CSS0033964 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-09 67.0 66 45.5
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-09 67.0 66 45.5
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-09 67.0 66 45.5
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-09 67.0 68 45.6
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 1.0e-09 67.0 78 43.6
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-09 66.6 66 45.5
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-09 66.6 66 45.5
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.3e-09 66.6 68 39.7
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-09 66.2 66 45.5
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-09 66.2 70 45.7
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-09 66.2 70 44.3
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-09 66.2 71 43.7
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-09 66.2 71 43.7
Cpa.g.sc41.73 Carica papaya HOM05D000002 ORTHO05D000047 2.3e-09 65.9 113 38.1
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.3e-09 65.9 66 42.4
Cpa.g.sc10.272 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-09 65.5 67 44.8
Cpa.g.sc130.28 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-09 65.5 58 51.7
Hma1.2p1_0072F.1_g038350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-09 65.5 67 43.3
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.0e-09 65.5 68 39.7
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-09 65.1 66 43.9
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-09 64.7 66 43.9
Cpa.g.sc118.38 Carica papaya HOM05D000190 ORTHO05D000113 5.1e-09 64.7 40 70.0
CSS0034843 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.6e-09 64.3 78 39.7
CSS0045320 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.6e-09 64.3 78 39.7
Cpa.g.sc7.140 Carica papaya HOM05D000002 ORTHO05D000047 6.6e-09 64.3 40 72.5
Gohir.D11G265450 Gossypium hirsutum HOM05D000002 ORTHO05D000047 6.6e-09 64.3 71 45.1
Cpa.g.sc81.61 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-08 62.8 126 33.3
Lj1g0019835 Lotus japonicus HOM05D000002 ORTHO05D000047 1.9e-08 62.8 55 49.1
Cpa.g.sc474.2 Carica papaya HOM05D000002 ORTHO05D000047 2.5e-08 62.4 49 55.1
Cpa.g.sc35.42 Carica papaya HOM05D000002 ORTHO05D000047 3.3e-08 62.0 40 67.5
Cpa.g.sc7.46 Carica papaya HOM05D000002 ORTHO05D000047 3.3e-08 62.0 108 35.2
Cpa.g.sc44.34 Carica papaya HOM05D000002 ORTHO05D000047 4.3e-08 61.6 118 34.7
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.3e-08 61.6 70 41.4
Cpa.g.sc7.9 Carica papaya HOM05D000002 ORTHO05D000047 7.3e-08 60.8 135 32.6
Hma1.2p1_0036F.1_g023540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.3e-08 60.8 49 57.1
Hma1.2p1_0661F.1_g198180 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.3e-08 60.8 69 37.7
Hma1.2p1_0079F.1_g041630 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.6e-08 60.5 60 46.7
Cpa.g.sc10.10 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-07 60.1 99 41.4
Cpa.g.sc202.10 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-07 59.7 40 62.5
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-07 59.3 59 47.5
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 2.8e-07 58.9 77 42.9
Hma1.2p1_0935F.1_g238580 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.8e-07 58.2 53 49.1
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 48 52.1
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 48 52.1
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 48 52.1
CSS0023724 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 48 52.1
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 48 52.1
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 48 52.1
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 48 52.1
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 48 52.1
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 48 52.1
Cpa.g.sc6293.1 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-06 57.0 35 65.7
Lj3g0012381 Lotus japonicus HOM05D000002 ORTHO05D000047 1.1e-06 57.0 54 48.1
Cpa.g.sc39.49 Carica papaya HOM05D000846 ORTHO05D006755 1.4e-06 56.6 68 39.7
Hma1.2p1_0062F.1_g034270 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-06 56.6 49 51.0
CSS0008463 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-06 56.2 65 43.1
Cpa.g.sc16.29 Carica papaya HOM05D000644 ORTHO05D000504 1.8e-06 56.2 40 65.0
Nn5g30282 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.8e-06 56.2 49 44.9
CANSAT25G0968 Cannabis sativa HOM05D000002 ORTHO05D000047 2.4e-06 55.8 66 36.4
Cpa.g.sc39.115 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-06 55.5 139 29.5
Cpa.g.sc614.1 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-06 55.5 68 44.1
Hma1.2p1_0628F.1_g191990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-06 55.5 48 50.0
Hma1.2p1_0946F.1_g240310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-06 55.5 63 36.5
Cpa.g.sc0.168 Carica papaya HOM05D000002 ORTHO05D000047 5.3e-06 54.7 39 71.8
Cpa.g.sc166.3 Carica papaya HOM05D000002 ORTHO05D000047 5.3e-06 54.7 101 31.7
Cpa.g.sc32.62 Carica papaya HOM05D000002 ORTHO05D000047 5.3e-06 54.7 41 58.5
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.0e-06 53.9 65 33.8
Hma1.2p1_1132F.1_g260330 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.0e-06 53.9 69 31.9
Hma1.2p1_1132F.1_g260335 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.0e-06 53.9 69 31.9


User provided reference genes

Program Settings