Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc23.86 Carica papaya HOM05D001966 ORTHO05D010986 9.0e-43 176.4 83 100.0
CsaV3_UNG196500 Cucumis sativus L. HOM05D001966 ORTHO05D010986 1.4e-38 162.5 81 95.1
Sed0007694 Sechium edule HOM05D001966 ORTHO05D010986 1.4e-38 162.5 81 95.1
Sed0023467 Sechium edule HOM05D001966 ORTHO05D010986 1.4e-38 162.5 81 95.1
Sed0025793 Sechium edule HOM05D001966 ORTHO05D010986 1.4e-38 162.5 81 95.1
Cfa023005 Carpinus fangiana HOM05D001966 ORTHO05D010986 3.3e-37 157.9 81 92.6
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 4.3e-37 157.5 81 92.6
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 5.7e-37 157.1 81 91.4
Aqoxy38s012 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 9.7e-37 156.4 81 91.4
Aqoxy4G02030 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 9.7e-37 156.4 81 91.4
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 4.8e-36 154.1 78 93.6
Sed0001789 Sechium edule HOM05D001966 ORTHO05D010986 2.4e-35 151.8 74 97.3
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 2.6e-34 148.3 78 89.7
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 1.5e-29 132.5 66 93.9
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 3.3e-29 131.3 75 86.7
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 1.1e-27 126.3 61 96.7
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 1.1e-27 126.3 61 96.7
CARHR282380 Cardamine hirsuta HOM05D001966 ORTHO05D010986 1.1e-27 126.3 61 96.7
CARHR282500 Cardamine hirsuta HOM05D001966 ORTHO05D010986 1.1e-27 126.3 61 96.7
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 5.3e-27 124.0 62 93.5
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 7.0e-27 123.6 76 77.6
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 2.2e-25 118.6 60 91.7
arahy.Tifrunner.gnm1.ann1.LY649L Arachis hypogaea HOM05D001966 ORTHO05D010986 8.5e-25 116.7 59 91.5
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.9e-24 115.5 54 100.0
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.9e-24 115.5 54 100.0
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 7.2e-24 113.6 60 88.3
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 8.8e-22 106.7 52 94.2
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 8.8e-22 106.7 52 94.2
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 8.8e-22 106.7 52 94.2
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 1.1e-21 106.3 49 100.0
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.5e-21 105.9 54 92.6
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 1.5e-21 105.9 54 92.6
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.5e-21 105.9 54 92.6
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.5e-21 105.9 54 92.6
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 2.8e-20 101.7 70 71.4
ClCG09G021430 Citrullus lanatus HOM05D001966 ORTHO05D010986 3.7e-20 101.3 55 89.1
Nitab4.5_0004137g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.2e-18 96.3 71 70.4
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 1.2e-18 96.3 51 86.3
CSS0015594 Camellia sinensis var. sinensis HOM05D001966 ORTHO05D010986 2.0e-18 95.5 63 76.2
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 2.0e-18 95.5 53 86.8
Peaxi162Scf00994g00002 Petunia axillaris HOM05D001966 ORTHO05D010986 2.7e-18 95.1 52 88.5
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 5.0e-17 90.9 52 84.6
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 1.6e-15 85.9 41 95.1
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.6e-15 85.9 41 95.1
Nitab4.5_0001761g0140 Nicotiana tabacum HOM05D001966 ORTHO05D010986 6.1e-15 84.0 52 80.8
arahy.Tifrunner.gnm1.ann1.X4EL03 Arachis hypogaea HOM05D001966 ORTHO05D010986 8.0e-15 83.6 47 85.1
Nitab4.5_0001986g0110 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.8e-14 82.4 51 80.4
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 2.3e-14 82.0 52 76.9
Oeu041412.1 Olea europaea HOM05D001966 ORTHO05D010986 6.8e-14 80.5 52 76.9
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 2.0e-13 79.0 40 90.0
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 7.5e-13 77.0 44 81.8
Nitab4.5_0006502g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 2.2e-12 75.5 51 74.5
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 2.8e-12 75.1 36 97.2
arahy.Tifrunner.gnm1.ann1.MCF6CI Arachis hypogaea HOM05D001966 ORTHO05D010986 9.1e-11 70.1 35 91.4
Nitab4.5_0012234g0090 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.6e-10 69.3 45 77.8
Nitab4.5_0009355g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.3e-09 66.2 36 88.9
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 2.9e-09 65.1 45 68.9
Nitab4.5_0007400g0150 Nicotiana tabacum HOM05D001966 ORTHO05D010986 5.0e-09 64.3 51 64.7
Psat7g093280 Pisum sativum HOM05D001966 ORTHO05D010986 1.5e-08 62.8 53 64.2
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 1.5e-08 62.8 34 85.3
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 3.2e-08 61.6 52 63.5
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 4.2e-08 61.2 33 84.8
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-07 59.7 33 81.8
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.6e-07 59.3 55 61.8
Lalb_Chr08g0236231 Lupinus albus HOM05D001966 ORTHO05D010986 2.7e-07 58.5 31 87.1
Lalb_Chr24g0400891 Lupinus albus HOM05D001966 ORTHO05D010986 2.7e-07 58.5 31 87.1
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 4.0e-06 54.7 28 89.3
Actinidia30703 Actinidia chinensis HOM05D001966 ORTHO05D009823 5.2e-06 54.3 60 58.3


User provided reference genes

Program Settings