Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc23.142 Carica papaya HOM05D002586 ORTHO05D007521 1.3e-60 236.1 115 100.0
Cfa003292 Carpinus fangiana HOM05D000417 ORTHO05D000342 1.6e-45 186.0 101 86.1
Haze_25681 Corylus avellana HOM05D002586 ORTHO05D007521 4.6e-45 184.5 97 89.7
Gohir.D06G058900 Gossypium hirsutum HOM05D002586 ORTHO05D007521 1.3e-44 183.0 114 78.1
Gorai.010G068800 Gossypium raimondii HOM05D000417 ORTHO05D000342 1.3e-44 183.0 114 78.1
Prupe.7G227000 Prunus persica HOM05D000417 ORTHO05D000342 1.7e-44 182.6 101 84.2
Duzib187G1530 Durio zibethinus HOM05D002586 ORTHO05D007521 5.1e-44 181.0 101 84.2
Gohir.A06G060550 Gossypium hirsutum HOM05D000417 ORTHO05D007521 6.6e-44 180.6 114 77.2
Thecc.09G114900 Theobroma cacao HOM05D002586 ORTHO05D007521 6.6e-44 180.6 101 83.2
MD02G1062400 Malus domestica HOM05D002586 ORTHO05D007521 1.1e-43 179.9 101 84.2
TWI34G1303 Tripterygium wilfordii HOM05D002586 ORTHO05D007521 1.9e-43 179.1 114 77.2
CiPaw.03G235200 Carya illinoinensis HOM05D002586 ORTHO05D007521 4.3e-43 177.9 101 82.2
TAR383G0369 Trochodendron aralioides HOM05D002586 ORTHO05D007521 7.3e-43 177.2 113 74.3
Nn7g36037 Nelumbo nucifera HOM05D002586 ORTHO05D007521 1.3e-42 176.4 101 80.2
RcHm_v2.0_Chr2g0091071 Rosa chinensis HOM05D002586 ORTHO05D007521 1.6e-42 176.0 101 83.2
QL02p086119 Quercus lobata HOM05D002586 ORTHO05D007521 4.8e-42 174.5 101 79.2
Dinv41576 Davidia involucrata HOM05D005850 ORTHO05D007405 8.1e-42 173.7 101 81.2
Manes.03G068300 Manihot esculenta HOM05D002586 ORTHO05D007521 8.1e-42 173.7 101 80.2
CSS0041277 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007521 2.4e-41 172.2 101 79.2
FvH4_1g05380 Fragaria vesca HOM05D002586 ORTHO05D007521 5.3e-41 171.0 101 81.2
GSVIVG01015435001 Vitis vinifera HOM05D000417 ORTHO05D000342 5.3e-41 171.0 101 78.2
Glyma.05G012700 Glycine max HOM05D002586 ORTHO05D007521 6.9e-41 170.6 114 71.9
CANSAT56G1449 Cannabis sativa HOM05D002586 ORTHO05D007521 1.2e-40 169.9 114 71.9
CsaV3_2G002470 Cucumis sativus L. HOM05D002586 ORTHO05D007521 2.6e-40 168.7 114 72.8
FAN19G1865 Fragaria x ananassa HOM05D002586 ORTHO05D007521 2.6e-40 168.7 99 81.8
Psat4g043160 Pisum sativum HOM05D002586 ORTHO05D007521 3.4e-40 168.3 99 78.8
Hund26118 Selenicereus undatus HOM05D002586 ORTHO05D007521 3.4e-40 168.3 101 80.2
FAN23G1201 Fragaria x ananassa HOM05D000417 ORTHO05D007521 4.5e-40 167.9 99 80.8
Glyma.17G120833 Glycine max HOM05D002586 ORTHO05D007521 4.5e-40 167.9 114 70.2
THA.LOC104811104 Tarenaya hassleriana HOM05D002586 ORTHO05D007521 5.8e-40 167.5 114 71.1
CSS0036442 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007521 7.6e-40 167.2 99 79.8
Lsat_1_v5_gn_5_99861 Lactuca sativa HOM05D002586 ORTHO05D007521 7.6e-40 167.2 99 77.8
Lj4g0022349 Lotus japonicus HOM05D002586 ORTHO05D007521 7.6e-40 167.2 114 70.2
Oeu034436.1 Olea europaea HOM05D000066 ORTHO05D000055 7.6e-40 167.2 100 80.0
TPR.G26750 Trifolium pratense HOM05D002586 ORTHO05D007521 7.6e-40 167.2 101 75.2
Ca_02541_v3 Cicer arietinum L. HOM05D002586 ORTHO05D007521 9.9e-40 166.8 99 76.8
FAN26G0906 Fragaria x ananassa HOM05D002586 ORTHO05D007521 9.9e-40 166.8 99 81.8
FAN26G3367 Fragaria x ananassa HOM05D002586 ORTHO05D007521 9.9e-40 166.8 99 81.8
Lj7A641G79 Lonicera japonica HOM05D002586 ORTHO05D007521 9.9e-40 166.8 99 76.8
Potri.018G072200 Populus trichocarpa HOM05D002586 ORTHO05D007521 1.3e-39 166.4 101 77.2
Hma1.2p1_1968F.1_g309470 Hydrangea macrophylla HOM05D002586 ORTHO05D007521 2.9e-39 165.2 101 78.2
Sabra18G0064400 Salix brachista HOM05D002586 ORTHO05D007521 2.9e-39 165.2 101 75.2
EL10Ac8g18544 Beta vulgaris HOM05D002586 ORTHO05D007521 3.8e-39 164.9 99 78.8
MELO3C004542.2 Cucumis melo HOM05D002586 ORTHO05D007521 4.9e-39 164.5 99 76.8
Sed0019430 Sechium edule HOM05D002586 ORTHO05D007521 4.9e-39 164.5 101 74.3
arahy.Tifrunner.gnm1.ann1.79CRDV Arachis hypogaea HOM05D002586 ORTHO05D007521 6.4e-39 164.1 99 77.8
Migut.D02058 Erythranthe guttata HOM05D002586 ORTHO05D007521 6.4e-39 164.1 114 69.3
MBI01_g20396_MAGBIO Magnolia biondii HOM05D002586 ORTHO05D007521 6.4e-39 164.1 113 69.9
Rhsim03G0244900 Rhododendron simsii HOM05D002586 ORTHO05D007521 8.4e-39 163.7 97 79.4
Sc18g0001020 Simmondsia chinensis HOM05D002586 ORTHO05D007521 8.4e-39 163.7 101 75.2
arahy.Tifrunner.gnm1.ann1.7815EC Arachis hypogaea HOM05D002586 ORTHO05D007521 1.1e-38 163.3 101 75.2
Ciclev10007363m.g Citrus clementina HOM05D000417 ORTHO05D000342 1.4e-38 162.9 100 76.0
HanXRQChr10g0317371 Helianthus annuus HOM05D002586 ORTHO05D007521 9.3e-38 160.2 101 72.3
PGR142G2078 Punica granatum HOM05D002586 ORTHO05D007521 9.3e-38 160.2 101 73.3
Lalb_Chr08g0235011 Lupinus albus HOM05D002586 ORTHO05D007521 1.2e-37 159.8 101 70.3
ClCG11G002640 Citrullus lanatus HOM05D002586 ORTHO05D007521 1.6e-37 159.5 128 64.8
ECA234G2455 Erigeron canadensis HOM05D000417 ORTHO05D007521 1.6e-37 159.5 97 74.2
HanXRQChr12g0355841 Helianthus annuus HOM05D002586 ORTHO05D007521 1.6e-37 159.5 108 67.6
Medtr4g112015 Medicago truncatula HOM05D002586 ORTHO05D007521 1.6e-37 159.5 99 73.7
Atru.chr7.1294 Acer truncatum HOM05D000417 ORTHO05D000342 2.1e-37 159.1 100 75.0
Cc10_g11950 Coffea canephora HOM05D002586 ORTHO05D007521 2.1e-37 159.1 100 70.0
vmacro06194 Vaccinium macrocarpon HOM05D002586 ORTHO05D007521 2.1e-37 159.1 97 77.3
Lalb_Chr21g0316611 Lupinus albus HOM05D002586 ORTHO05D007521 2.7e-37 158.7 101 72.3
SGA_v2.0_scaffold1G00550 Striga asiatica HOM05D002586 ORTHO05D007521 2.7e-37 158.7 101 70.3
arahy.Tifrunner.gnm1.ann1.0DQ71P Arachis hypogaea HOM05D002586 ORTHO05D007521 3.5e-37 158.3 99 73.7
AUR62011030 Chenopodium quinoa HOM05D002586 ORTHO05D007521 3.5e-37 158.3 99 73.7
arahy.Tifrunner.gnm1.ann1.QVF5JZ Arachis hypogaea HOM05D002586 ORTHO05D007521 4.6e-37 157.9 99 75.8
AT3G56120 Arabidopsis thaliana HOM05D002586 ORTHO05D007521 2.3e-36 155.6 101 71.3
ATR0605G072 Amborella trichopoda HOM05D002586 ORTHO05D007521 6.7e-36 154.1 101 71.3
AL5G37440 Arabidopsis lyrata HOM05D002586 ORTHO05D007521 6.7e-36 154.1 101 71.3
Solyc05g006200.4 Solanum lycopersicum HOM05D002586 ORTHO05D007521 8.7e-36 153.7 100 72.0
PSO210G4513 Papaver somniferum HOM05D002586 ORTHO05D007521 1.5e-35 152.9 101 68.3
Thhalv10005971m.g Eutrema salsugineum HOM05D002586 ORTHO05D007521 2.5e-35 152.1 99 70.7
DCAR_028731 Daucus carota HOM05D002250 ORTHO05D007521 4.3e-35 151.4 101 67.3
PSO170G5904 Papaver somniferum HOM05D002586 ORTHO05D007521 7.4e-35 150.6 101 67.3
Sp5g06410 Schrenkiella parvula HOM05D002586 ORTHO05D007521 7.4e-35 150.6 99 70.7
Peaxi162Scf00560g00619 Petunia axillaris HOM05D002586 ORTHO05D007521 9.6e-35 150.2 99 70.7
PGSC0003DMG401015580 Solanum tuberosum HOM05D002586 ORTHO05D007521 1.3e-34 149.8 98 72.4
arahy.Tifrunner.gnm1.ann1.LVY3P8 Arachis hypogaea HOM05D002586 ORTHO05D007521 2.8e-34 148.7 112 67.0
CDE05G1108 Ceratophyllum demersum HOM05D002586 ORTHO05D007521 2.8e-34 148.7 101 68.3
CAN.G444.6 Capsicum annuum HOM05D002586 ORTHO05D007521 4.8e-34 147.9 100 70.0
Aqoxy4G02394 Aquilegia oxysepala HOM05D002586 ORTHO05D007521 1.1e-33 146.7 128 55.5
BcaB01g00029 Brassica carinata HOM05D002586 ORTHO05D007521 3.1e-33 145.2 99 69.7
A09p49100 Brassica napus HOM05D002586 ORTHO05D007521 5.3e-33 144.4 99 69.7
BraA09t40362Z Brassica rapa HOM05D002586 ORTHO05D007521 5.3e-33 144.4 99 69.7
Aa31LG10G11030 Aethionema arabicum HOM05D002586 ORTHO05D007521 9.0e-33 143.7 99 70.7
BcaC07g39927 Brassica carinata HOM05D002586 ORTHO05D007521 1.5e-32 142.9 109 66.1
C08p31420 Brassica napus HOM05D002586 ORTHO05D007521 1.5e-32 142.9 109 66.1
BolC8t50763H Brassica oleracea HOM05D002586 ORTHO05D007521 1.5e-32 142.9 109 66.1
Zm00001eb184100 Zea mays HOM05D002586 ORTHO05D007521 2.0e-32 142.5 108 63.9
SEGI_20865 Sequoiadendron giganteum HOM05D002586 ORTHO05D007521 1.0e-31 140.2 101 60.4
Os02g0606300 Oryza sativa ssp. japonica HOM05D002586 ORTHO05D007521 2.9e-31 138.7 114 58.8
SalBow1G1951 Salvia bowleyana HOM05D002586 ORTHO05D007521 6.5e-31 137.5 99 65.7
HPP92_026033 Vanilla planifolia HOM05D002586 ORTHO05D007521 9.3e-30 133.7 101 61.4
Nitab4.5_0000066g0020 Nicotiana tabacum HOM05D002586 ORTHO05D007521 2.1e-29 132.5 98 67.3
Nitab4.5_0000005g0480 Nicotiana tabacum HOM05D002586 ORTHO05D007521 4.6e-29 131.3 98 67.3
SGA_v2.0_scaffold42G16128 Striga asiatica HOM05D002586 ORTHO05D007521 7.4e-27 124.0 89 67.4
unitig_46.g18492 Utricularia gibba HOM05D002586 ORTHO05D007521 6.3e-26 120.9 99 57.6
Actinidia32694 Actinidia chinensis HOM05D002586 ORTHO05D007521 5.3e-25 117.9 90 64.4
COL.COLO4_34935 Corchorus olitorius HOM05D002586 ORTHO05D007521 2.6e-24 115.5 64 85.9
Duzib168G1197 Durio zibethinus HOM05D002586 ORTHO05D007521 7.6e-24 114.0 95 65.3
arahy.Tifrunner.gnm1.ann1.4YWE6A Arachis hypogaea HOM05D002586 ORTHO05D007521 2.5e-22 109.0 66 75.8
SMO141G0090 Selaginella moellendorffii HOM05D002586 ORTHO05D007521 2.7e-21 105.5 100 47.0
AagrBONN_evm.TU.Sc2ySwM_344.2815 Anthoceros agrestis HOM05D002586 ORTHO05D007521 3.3e-19 98.6 101 48.5
SHI02609 Sapria himalayana HOM05D002586 ORTHO05D007521 1.6e-18 96.3 61 72.1
Pp3c17_17170 Physcomitrium patens HOM05D002586 ORTHO05D007521 2.9e-15 85.5 100 40.0
Mapoly0022s0148 Marchantia polymorpha HOM05D002586 ORTHO05D007521 2.3e-12 75.9 100 36.0
Eucgr.C01077 Eucalyptus grandis HOM05D002586 ORTHO05D007521 8.2e-10 67.4 38 78.9
CBR_g154 Chara braunii HOM05D002586 ORTHO05D007521 1.1e-09 67.0 116 32.8
MCO08G012 Micromonas commoda HOM05D002586 ORTHO05D007521 1.2e-08 63.5 100 32.0
Hund14754 Selenicereus undatus HOM05D002586 ORTHO05D007521 1.5e-08 63.2 36 77.8


User provided reference genes

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