Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2244.1 Carica papaya HOM05D000002 ORTHO05D001134 6.2e-34 146.7 67 100.0
Cpa.g.sc495.1 Carica papaya HOM05D000002 ORTHO05D001134 4.9e-15 84.0 65 64.6
Cpa.g.sc4.185 Carica papaya HOM05D000002 ORTHO05D001134 1.9e-14 82.0 66 54.5
Cpa.g.sc76.1 Carica papaya HOM05D000002 ORTHO05D001134 3.2e-14 81.3 51 70.6
CANSAT01G3173 Cannabis sativa HOM05D000002 ORTHO05D001134 1.9e-11 72.0 65 52.3
CANSAT54G1705 Cannabis sativa HOM05D000009 ORTHO05D001134 1.9e-11 72.0 65 52.3
CANSAT64G0791 Cannabis sativa HOM05D000002 ORTHO05D001134 1.9e-11 72.0 65 52.3
Atru.chr11.404 Acer truncatum HOM05D000002 ORTHO05D001134 4.3e-11 70.9 67 47.8
CANSAT01G2557 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-11 70.9 65 50.8
Cpa.g.sc1651.1 Carica papaya HOM05D000002 ORTHO05D001134 4.3e-11 70.9 56 60.7
Ah.03g146900 Amaranthus hybridus HOM05D000002 ORTHO05D001134 2.1e-10 68.6 64 51.6
CSS0044748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.8e-10 68.2 65 44.6
Sabra19G0009600 Salix brachista HOM05D000002 ORTHO05D001134 2.8e-10 68.2 67 46.3
CSS0001359 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0005787 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0013561 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0015894 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0017973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0019952 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0021489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0031421 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0032029 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0040386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0045046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0047428 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
CSS0048219 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 44.6
Sabra18G0065300 Salix brachista HOM05D000002 ORTHO05D001134 4.8e-10 67.4 65 47.7
Cpa.g.sc123.1 Carica papaya HOM05D000002 ORTHO05D001134 6.2e-10 67.0 48 64.6
Sabra11G0075700 Salix brachista HOM05D000002 ORTHO05D001134 1.4e-09 65.9 65 46.2
Sabra11G0076200 Salix brachista HOM05D000002 ORTHO05D001134 1.4e-09 65.9 65 46.2
Sabra11G0092000 Salix brachista HOM05D000002 ORTHO05D001134 1.4e-09 65.9 65 46.2
CSS0043616 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.4e-09 65.1 65 43.1
CANSAT35G1793 Cannabis sativa HOM05D000004 ORTHO05D000002 2.4e-09 65.1 65 50.8
Atru.chr13.1760 Acer truncatum HOM05D000002 ORTHO05D001134 4.0e-09 64.3 67 46.3
CANSAT35G0560 Cannabis sativa HOM05D000002 ORTHO05D001134 5.3e-09 63.9 65 43.1
CANSAT56G2162 Cannabis sativa HOM05D000002 ORTHO05D001134 5.3e-09 63.9 65 43.1
CSS0004348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.9e-09 63.5 65 43.1
Atru.chr4.721 Acer truncatum HOM05D000002 ORTHO05D001134 9.0e-09 63.2 67 43.3
Cpa.g.sc2649.1 Carica papaya HOM05D000002 ORTHO05D001134 2.0e-08 62.0 48 56.2
Sabra05G0016200 Salix brachista HOM05D000002 ORTHO05D001134 2.0e-08 62.0 65 43.1
CANSAT01G0629 Cannabis sativa HOM05D000002 ORTHO05D001134 2.6e-08 61.6 65 43.1
MD02G1100700 Malus domestica HOM05D000002 ORTHO05D001134 2.6e-08 61.6 66 40.9
Atru.chr13.1874 Acer truncatum HOM05D000002 ORTHO05D001134 4.5e-08 60.8 67 44.8
CANSAT01G2684 Cannabis sativa HOM05D000002 ORTHO05D001134 4.5e-08 60.8 65 41.5
CANSAT56G1418 Cannabis sativa HOM05D000002 ORTHO05D001134 4.5e-08 60.8 65 41.5
CANSAT56G3404 Cannabis sativa HOM05D000002 ORTHO05D001134 4.5e-08 60.8 65 41.5
CANSAT64G0883 Cannabis sativa HOM05D000002 ORTHO05D001134 4.5e-08 60.8 65 41.5
Cpa.g.sc20.178 Carica papaya HOM05D000002 ORTHO05D001134 4.5e-08 60.8 49 55.1
CANSAT21G1843 Cannabis sativa HOM05D000002 ORTHO05D001134 7.6e-08 60.1 65 40.0
CANSAT54G3019 Cannabis sativa HOM05D000002 ORTHO05D001134 1.0e-07 59.7 65 40.0
CANSAT80G1091 Cannabis sativa HOM05D000002 ORTHO05D001134 1.0e-07 59.7 65 41.5
CAN.G1580.3 Capsicum annuum HOM05D000002 ORTHO05D001134 1.3e-07 59.3 67 38.8
AUR62040777 Chenopodium quinoa HOM05D000002 ORTHO05D000031 1.3e-07 59.3 65 44.6
Ca_23898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-07 59.3 65 40.0
MD15G1059300 Malus domestica HOM05D000002 ORTHO05D001134 1.3e-07 59.3 66 36.4
THA.LOC104823254 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 1.3e-07 59.3 65 40.0
Migut.M00507 Erythranthe guttata HOM05D000002 ORTHO05D001134 2.2e-07 58.5 65 40.0
CANSAT01G1051 Cannabis sativa HOM05D000002 ORTHO05D001134 3.8e-07 57.8 65 41.5
ECA233G2631 Erigeron canadensis HOM05D000002 ORTHO05D001134 6.5e-07 57.0 64 39.1
AUR62032617 Chenopodium quinoa HOM05D000202 ORTHO05D001134 8.4e-07 56.6 65 43.1
ECA232G4604 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 55.8 64 35.9
THA.LOC104803468 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 1.9e-06 55.5 65 38.5
EL10Ac7g17233 Beta vulgaris HOM05D000002 ORTHO05D001134 2.5e-06 55.1 65 40.0
CSS0026966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-06 55.1 66 36.4
CANSAT35G0076 Cannabis sativa HOM05D000002 ORTHO05D001134 2.5e-06 55.1 65 36.9
Dinv01219 Davidia involucrata HOM05D000002 ORTHO05D000001 2.5e-06 55.1 66 39.4
AL85U10020 Arabidopsis lyrata HOM05D000587 ORTHO05D001561 3.2e-06 54.7 66 37.9
Rhsim01G0099200 Rhododendron simsii HOM05D000002 ORTHO05D001134 3.2e-06 54.7 66 37.9
CSS0026945 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-06 54.3 66 39.4
ECA236G2821 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-06 54.3 64 35.9
ECA238G4751 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-06 54.3 64 35.9
ECA247G2076 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-06 54.3 64 35.9
RcHm_v2.0_Chr3g0496001 Rosa chinensis HOM05D000002 ORTHO05D001134 4.2e-06 54.3 65 33.8
RcHm_v2.0_Chr5g0082051 Rosa chinensis HOM05D000002 ORTHO05D001134 4.2e-06 54.3 65 33.8
ECA238G3259 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-06 53.9 64 35.9
RcHm_v2.0_Chr2g0173271 Rosa chinensis HOM05D000002 ORTHO05D001134 5.5e-06 53.9 67 32.8
TAR134G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.5e-06 53.9 66 39.4
ECA247G2898 Erigeron canadensis HOM05D000002 ORTHO05D001134 7.1e-06 53.5 64 32.8
ECA240G3666 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.3e-06 53.1 64 34.4
RcHm_v2.0_Chr6g0255561 Rosa chinensis HOM05D000002 ORTHO05D001134 9.3e-06 53.1 67 32.8


User provided reference genes

Program Settings