Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc224.7 Carica papaya HOM05D000610 ORTHO05D004774 2.2e-49 198.7 106 100.0
Thecc.05G148900 Theobroma cacao HOM05D000610 ORTHO05D004774 1.4e-40 169.5 98 90.8
TWI53G1231 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 1.4e-40 169.5 98 90.8
TWI74G1635 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 2.4e-40 168.7 94 92.6
THA.LOC104824436 Tarenaya hassleriana HOM05D000610 ORTHO05D004774 4.1e-40 167.9 98 91.8
AL4G40000 Arabidopsis lyrata HOM05D000610 ORTHO05D004774 5.4e-40 167.5 98 88.8
AT2G41700 Arabidopsis thaliana HOM05D000610 ORTHO05D004774 5.4e-40 167.5 98 88.8
CARHR136790 Cardamine hirsuta HOM05D000610 ORTHO05D004774 5.4e-40 167.5 98 88.8
Duzib128G1628 Durio zibethinus HOM05D000610 ORTHO05D004774 7.0e-40 167.2 98 89.8
Gohir.D01G120000 Gossypium hirsutum HOM05D000610 ORTHO05D004774 7.0e-40 167.2 98 89.8
Gorai.002G146400 Gossypium raimondii HOM05D000610 ORTHO05D004774 7.0e-40 167.2 98 89.8
Gohir.A01G131111 Gossypium hirsutum HOM05D000610 ORTHO05D004774 9.2e-40 166.8 98 88.8
Aa31LG1G23710 Aethionema arabicum HOM05D000610 ORTHO05D004774 1.2e-39 166.4 98 87.8
Duzib093G2237 Durio zibethinus HOM05D000610 ORTHO05D004774 1.2e-39 166.4 98 89.8
HanXRQChr10g0300621 Helianthus annuus HOM05D000610 ORTHO05D004774 1.2e-39 166.4 98 88.8
Thhalv10016127m.g Eutrema salsugineum HOM05D000610 ORTHO05D004774 1.6e-39 166.0 98 88.8
COL.COLO4_08236 Corchorus olitorius HOM05D000610 ORTHO05D004774 2.0e-39 165.6 98 87.8
Sp4g23940 Schrenkiella parvula HOM05D000610 ORTHO05D004774 2.7e-39 165.2 98 87.8
Carub.0004s2397 Capsella rubella HOM05D000610 ORTHO05D004774 3.5e-39 164.9 98 86.7
Lsat_1_v5_gn_9_30620 Lactuca sativa HOM05D000610 ORTHO05D004774 5.9e-39 164.1 98 86.7
PGR004G2234 Punica granatum HOM05D000610 ORTHO05D004774 7.8e-39 163.7 98 89.8
Actinidia39216 Actinidia chinensis HOM05D000610 ORTHO05D004774 1.0e-38 163.3 98 86.7
DCAR_020494 Daucus carota HOM05D000610 ORTHO05D004774 1.3e-38 162.9 98 84.7
Dinv18665 Davidia involucrata HOM05D000610 ORTHO05D004774 1.3e-38 162.9 98 86.7
Psat3g072960 Pisum sativum HOM05D000610 ORTHO05D004774 1.3e-38 162.9 98 84.7
C03p27900 Brassica napus HOM05D000610 ORTHO05D004774 1.7e-38 162.5 95 88.4
vmacro07838 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 1.7e-38 162.5 98 86.7
CiPaw.09G038900 Carya illinoinensis HOM05D000610 ORTHO05D004774 2.3e-38 162.2 98 86.7
FvH4_6g24100 Fragaria vesca HOM05D000610 ORTHO05D004774 2.3e-38 162.2 98 86.7
FAN02G4008 Fragaria x ananassa HOM05D000610 ORTHO05D004774 2.3e-38 162.2 98 86.7
FAN09G1277 Fragaria x ananassa HOM05D000610 ORTHO05D004774 2.3e-38 162.2 98 86.7
FAN14G3175 Fragaria x ananassa HOM05D000610 ORTHO05D004774 2.3e-38 162.2 98 86.7
Atru.chr1.1122 Acer truncatum HOM05D000610 ORTHO05D004774 2.9e-38 161.8 98 85.7
arahy.Tifrunner.gnm1.ann1.LF6SQW Arachis hypogaea HOM05D000610 ORTHO05D004774 2.9e-38 161.8 98 84.7
Ciclev10004128m.g Citrus clementina HOM05D000610 ORTHO05D004774 2.9e-38 161.8 98 87.8
Nn7g36312 Nelumbo nucifera HOM05D000610 ORTHO05D004774 2.9e-38 161.8 98 85.7
Sc13g0001650 Simmondsia chinensis HOM05D000610 ORTHO05D004774 2.9e-38 161.8 98 87.8
Potri.006G049300 Populus trichocarpa HOM05D000610 ORTHO05D004774 5.0e-38 161.0 98 85.7
RcHm_v2.0_Chr3g0482761 Rosa chinensis HOM05D000610 ORTHO05D004774 5.0e-38 161.0 98 84.7
GSVIVG01033258001 Vitis vinifera HOM05D000610 ORTHO05D004774 5.0e-38 161.0 98 85.7
CDE05G2711 Ceratophyllum demersum HOM05D000610 ORTHO05D004774 6.6e-38 160.6 98 82.7
MD12G1079400 Malus domestica HOM05D000610 ORTHO05D004774 6.6e-38 160.6 98 84.7
Phvul.001G131150 Phaseolus vulgaris HOM05D000610 ORTHO05D004774 6.6e-38 160.6 98 85.7
arahy.Tifrunner.gnm1.ann1.50CUSQ Arachis hypogaea HOM05D000610 ORTHO05D004774 8.6e-38 160.2 98 83.7
arahy.Tifrunner.gnm1.ann1.624G49 Arachis hypogaea HOM05D000610 ORTHO05D004774 8.6e-38 160.2 98 83.7
CSS0013319 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 8.6e-38 160.2 98 83.7
Peaxi162Scf00130g00325 Petunia axillaris HOM05D000610 ORTHO05D004774 8.6e-38 160.2 98 84.7
ECA247G3032 Erigeron canadensis HOM05D000610 ORTHO05D004774 1.1e-37 159.8 98 83.7
Manes.09G020400 Manihot esculenta HOM05D000610 ORTHO05D004774 1.1e-37 159.8 98 84.7
Solyc04g015970.3 Solanum lycopersicum HOM05D000610 ORTHO05D004774 1.1e-37 159.8 98 83.7
Sopen04g007980 Solanum pennellii HOM05D000610 ORTHO05D004774 1.1e-37 159.8 98 83.7
TPR.G3701 Trifolium pratense HOM05D000610 ORTHO05D004774 1.5e-37 159.5 98 83.7
Cfa016807 Carpinus fangiana HOM05D000610 ORTHO05D004774 1.9e-37 159.1 98 84.7
Haze_19840 Corylus avellana HOM05D000610 ORTHO05D004774 1.9e-37 159.1 98 84.7
MBI19_g13038_MAGBIO Magnolia biondii HOM05D000610 ORTHO05D004774 1.9e-37 159.1 98 84.7
Prupe.7G058100 Prunus persica HOM05D000610 ORTHO05D004774 1.9e-37 159.1 98 83.7
Rhsim03G0027100 Rhododendron simsii HOM05D000610 ORTHO05D004774 1.9e-37 159.1 98 83.7
CANSAT80G2124 Cannabis sativa HOM05D000610 ORTHO05D004774 3.3e-37 158.3 109 77.1
Lj1g0005409 Lotus japonicus HOM05D000610 ORTHO05D004774 5.6e-37 157.5 98 82.7
Lalb_Chr25g0287161 Lupinus albus HOM05D000610 ORTHO05D004774 5.6e-37 157.5 98 83.7
Eucgr.A02339 Eucalyptus grandis HOM05D000610 ORTHO05D004774 7.3e-37 157.1 98 83.7
Oeu023112.1 Olea europaea HOM05D000610 ORTHO05D004774 7.3e-37 157.1 98 82.7
ATR0188G019 Amborella trichopoda HOM05D000610 ORTHO05D004774 9.5e-37 156.8 98 82.7
CAN.G676.30 Capsicum annuum HOM05D000610 ORTHO05D004774 9.5e-37 156.8 98 81.6
Aqoxy1G00231 Aquilegia oxysepala HOM05D000610 ORTHO05D004774 1.2e-36 156.4 98 83.7
Medtr7g091380 Medicago truncatula HOM05D000610 ORTHO05D004774 1.2e-36 156.4 98 81.6
Cc06_g17650 Coffea canephora HOM05D000610 ORTHO05D004774 1.6e-36 156.0 98 81.6
Sed0024936 Sechium edule HOM05D000610 ORTHO05D004774 2.1e-36 155.6 98 83.7
AUR62024461 Chenopodium quinoa HOM05D000610 ORTHO05D004774 3.6e-36 154.8 98 84.7
AUR62026051 Chenopodium quinoa HOM05D000610 ORTHO05D004774 3.6e-36 154.8 98 84.7
EL10Ac3g07101 Beta vulgaris HOM05D000610 ORTHO05D004774 4.7e-36 154.5 98 84.7
Nitab4.5_0000586g0130 Nicotiana tabacum HOM05D000610 ORTHO05D004774 4.7e-36 154.5 98 81.6
Ah.04g151590 Amaranthus hybridus HOM05D000610 ORTHO05D004774 6.1e-36 154.1 98 85.7
Glyma.03G136000 Glycine max HOM05D000610 ORTHO05D004774 6.1e-36 154.1 103 80.6
Nitab4.5_0009615g0020 Nicotiana tabacum HOM05D000610 ORTHO05D004774 6.1e-36 154.1 98 81.6
MSTRG.6422 Avicennia marina HOM05D000610 ORTHO05D004774 8.0e-36 153.7 98 81.6
ClCG04G003370 Citrullus lanatus HOM05D000610 ORTHO05D004774 8.0e-36 153.7 98 82.7
MELO3C023103.2 Cucumis melo HOM05D000610 ORTHO05D004774 8.0e-36 153.7 98 82.7
CsaV3_4G011860 Cucumis sativus L. HOM05D000610 ORTHO05D004774 8.0e-36 153.7 98 82.7
Migut.J01749 Erythranthe guttata HOM05D000610 ORTHO05D004774 1.0e-35 153.3 98 81.6
PSO384G3904 Papaver somniferum HOM05D000610 ORTHO05D004774 3.0e-35 151.8 98 79.6
SGA_v2.0_scaffold69G23121 Striga asiatica HOM05D000610 ORTHO05D004774 8.9e-35 150.2 98 79.6
SalBow6G0358 Salvia bowleyana HOM05D000610 ORTHO05D004774 2.0e-34 149.1 98 76.5
SalBow6G6580 Salvia bowleyana HOM05D000610 ORTHO05D004774 2.0e-34 149.1 98 76.5
unitig_8.g3505 Utricularia gibba HOM05D000610 ORTHO05D004774 2.0e-34 149.1 98 78.6
SEGI_25518 Sequoiadendron giganteum HOM05D000610 ORTHO05D004774 4.4e-34 147.9 98 77.6
HPP92_019406 Vanilla planifolia HOM05D000610 ORTHO05D004774 7.5e-34 147.1 98 79.6
HPP92_019408 Vanilla planifolia HOM05D000610 ORTHO05D004774 7.5e-34 147.1 98 79.6
SMO266G0031 Selaginella moellendorffii HOM05D000610 ORTHO05D004774 5.9e-31 137.5 98 74.5
BolC3t15161H Brassica oleracea HOM05D000610 ORTHO05D004774 4.0e-27 124.8 82 82.9
HPP92_019441 Vanilla planifolia HOM05D005572 ORTHO05D007494 5.2e-27 124.4 108 67.6
A03p23380 Brassica napus HOM05D000610 ORTHO05D004774 9.8e-26 120.2 105 68.6
BraA03t11555Z Brassica rapa HOM05D000610 ORTHO05D004774 9.8e-26 120.2 105 68.6
HanXRQChr10g0296791 Helianthus annuus HOM05D000610 ORTHO05D004774 3.0e-22 108.6 69 82.6
CBR_g38217 Chara braunii HOM05D000610 ORTHO05D004774 1.7e-06 56.2 88 43.2
Pp3c5_21220 Physcomitrium patens HOM05D000610 ORTHO05D004774 8.6e-06 53.9 93 40.9


User provided reference genes

Program Settings