Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc223.10 Carica papaya HOM05D003212 ORTHO05D003959 2.1e-191 672.2 326 100.0
CiPaw.14G006800 Carya illinoinensis HOM05D003212 ORTHO05D003959 3.7e-116 422.2 212 94.3
TWI38G0920 Tripterygium wilfordii HOM05D003212 ORTHO05D003959 8.3e-116 421.0 212 95.3
Thecc.07G075400 Theobroma cacao HOM05D003212 ORTHO05D003959 1.8e-115 419.9 212 93.9
Duzib213G0398 Durio zibethinus HOM05D003212 ORTHO05D003959 3.1e-115 419.1 214 93.5
RcHm_v2.0_Chr1g0323241 Rosa chinensis HOM05D003212 ORTHO05D003959 3.1e-115 419.1 212 94.3
QL04p014524 Quercus lobata HOM05D003212 ORTHO05D003959 4.1e-115 418.7 212 94.3
Duzib268G1229 Durio zibethinus HOM05D003212 ORTHO05D003959 7.0e-115 417.9 212 93.4
Atru.chr12.1386 Acer truncatum HOM05D003212 ORTHO05D003959 9.2e-115 417.5 214 93.9
FvH4_7g02810 Fragaria vesca HOM05D003212 ORTHO05D003959 9.2e-115 417.5 212 93.9
Lj3g0024329 Lotus japonicus HOM05D003212 ORTHO05D003959 1.2e-114 417.2 212 93.4
Lalb_Chr03g0032831 Lupinus albus HOM05D003212 ORTHO05D003959 1.2e-114 417.2 212 92.9
Gohir.A04G028000 Gossypium hirsutum HOM05D003212 ORTHO05D003959 1.6e-114 416.8 212 92.9
Potri.003G198501 Populus trichocarpa HOM05D003212 ORTHO05D003959 1.6e-114 416.8 212 93.4
Potri.T125906 Populus trichocarpa HOM05D003212 ORTHO05D003959 1.6e-114 416.8 212 93.4
Prupe.2G032600 Prunus persica HOM05D003212 ORTHO05D003959 1.6e-114 416.8 212 93.9
CANSAT80G2392 Cannabis sativa HOM05D003212 ORTHO05D003959 2.0e-114 416.4 212 93.4
VMungo1127G0513 Vigna mungo HOM05D003212 ORTHO05D003959 2.0e-114 416.4 214 92.5
FAN06G3951 Fragaria x ananassa HOM05D003212 ORTHO05D003959 2.7e-114 416.0 212 93.4
Potri.001G026300 Populus trichocarpa HOM05D003212 ORTHO05D003959 3.5e-114 415.6 212 93.4
COL.COLO4_09453 Corchorus olitorius HOM05D003212 ORTHO05D003959 4.5e-114 415.2 212 92.5
Haze_03071 Corylus avellana HOM05D003212 ORTHO05D003959 4.5e-114 415.2 212 93.4
MD09G1262400 Malus domestica HOM05D003212 ORTHO05D003959 5.9e-114 414.8 212 93.9
Ciclev10001014m.g Citrus clementina HOM05D003212 ORTHO05D003959 1.3e-113 413.7 214 93.0
Ciclev10004916m.g Citrus clementina HOM05D003212 ORTHO05D003959 1.3e-113 413.7 214 93.0
Atru.chr12.1389 Acer truncatum HOM05D003212 ORTHO05D003959 2.3e-113 412.9 214 92.5
FAN10G3499 Fragaria x ananassa HOM05D003212 ORTHO05D003959 2.3e-113 412.9 212 92.9
Manes.11G004200 Manihot esculenta HOM05D003212 ORTHO05D003959 2.9e-113 412.5 212 92.5
Gorai.009G432600 Gossypium raimondii HOM05D003212 ORTHO05D003959 3.8e-113 412.1 212 92.0
ClCG01G007740 Citrullus lanatus HOM05D003212 ORTHO05D003959 5.0e-113 411.8 211 92.9
Lalb_Chr04g0264051 Lupinus albus HOM05D003212 ORTHO05D003959 5.0e-113 411.8 211 92.4
arahy.Tifrunner.gnm1.ann1.28N5NC Arachis hypogaea HOM05D003212 ORTHO05D003959 6.6e-113 411.4 214 91.1
Glyma.11G154200 Glycine max HOM05D003212 ORTHO05D003959 6.6e-113 411.4 214 91.6
Glyma.13G198700 Glycine max HOM05D003212 ORTHO05D003959 8.6e-113 411.0 214 90.7
arahy.Tifrunner.gnm1.ann1.J24RTT Arachis hypogaea HOM05D003212 ORTHO05D003959 1.1e-112 410.6 214 91.1
PGR031G0586 Punica granatum HOM05D003212 ORTHO05D003959 1.5e-112 410.2 214 91.6
Sed0013182 Sechium edule HOM05D003212 ORTHO05D003959 1.5e-112 410.2 211 92.9
GSVIVG01000650001 Vitis vinifera HOM05D003212 ORTHO05D003959 1.9e-112 409.8 213 91.5
Lalb_Chr14g0366121 Lupinus albus HOM05D003212 ORTHO05D003959 2.5e-112 409.5 211 91.9
Nn7g36634 Nelumbo nucifera HOM05D003212 ORTHO05D003959 2.5e-112 409.5 212 91.0
Phvul.011G207800 Phaseolus vulgaris HOM05D003212 ORTHO05D003959 2.5e-112 409.5 214 90.7
Actinidia21523 Actinidia chinensis HOM05D003212 ORTHO05D003959 3.3e-112 409.1 212 92.9
arahy.Tifrunner.gnm1.ann1.HVGJ4H Arachis hypogaea HOM05D003212 ORTHO05D003959 3.3e-112 409.1 212 91.0
Gorai.013G167000 Gossypium raimondii HOM05D003212 ORTHO05D003959 3.3e-112 409.1 214 91.1
VMungo1080G0024 Vigna mungo HOM05D003212 ORTHO05D003959 3.3e-112 409.1 214 91.1
Lj3g0002083 Lotus japonicus HOM05D003212 ORTHO05D003959 4.3e-112 408.7 213 90.6
FAN01G2682 Fragaria x ananassa HOM05D003212 ORTHO05D003959 5.6e-112 408.3 220 90.0
Gohir.D05G360100 Gossypium hirsutum HOM05D003212 ORTHO05D003959 5.6e-112 408.3 212 91.5
arahy.Tifrunner.gnm1.ann1.HRMJ8R Arachis hypogaea HOM05D003212 ORTHO05D003959 7.3e-112 407.9 212 90.6
Peaxi162Scf00010g03311 Petunia axillaris HOM05D003212 ORTHO05D003959 7.3e-112 407.9 214 91.1
Phvul.005G029300 Phaseolus vulgaris HOM05D003212 ORTHO05D003959 7.3e-112 407.9 214 90.7
Ca_18881_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 9.5e-112 407.5 212 91.0
CsaV3_5G024820 Cucumis sativus L. HOM05D003212 ORTHO05D003959 1.2e-111 407.1 211 91.5
MSTRG.16992 Avicennia marina HOM05D003212 ORTHO05D003959 2.8e-111 406.0 214 91.1
Sed0011268 Sechium edule HOM05D003212 ORTHO05D003959 2.8e-111 406.0 211 91.0
THA.LOC104824191 Tarenaya hassleriana HOM05D003212 ORTHO05D003959 2.8e-111 406.0 212 91.5
Psat5g219440 Pisum sativum HOM05D003212 ORTHO05D003959 3.6e-111 405.6 211 91.5
CSS0010475 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 4.7e-111 405.2 214 91.1
CSS0011806 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 4.7e-111 405.2 214 91.1
Peaxi162Scf01010g00217 Petunia axillaris HOM05D003212 ORTHO05D003959 4.7e-111 405.2 214 90.7
TPR.G36892 Trifolium pratense HOM05D003212 ORTHO05D003959 4.7e-111 405.2 214 90.7
Gohir.D13G149300 Gossypium hirsutum HOM05D003212 ORTHO05D003959 8.0e-111 404.4 214 90.7
Cc02_g26670 Coffea canephora HOM05D003212 ORTHO05D003959 1.4e-110 403.7 214 90.2
Dinv32034 Davidia involucrata HOM05D003212 ORTHO05D003959 1.4e-110 403.7 214 91.6
Medtr3g017580 Medicago truncatula HOM05D003212 ORTHO05D003959 1.4e-110 403.7 211 90.5
Hund15723 Selenicereus undatus HOM05D003212 ORTHO05D003959 1.8e-110 403.3 214 90.2
Sc11g0006540 Simmondsia chinensis HOM05D003212 ORTHO05D003959 2.3e-110 402.9 212 89.6
Gohir.A13G144600 Gossypium hirsutum HOM05D003212 ORTHO05D003959 4.0e-110 402.1 212 90.6
Oeu003925.2 Olea europaea HOM05D003212 ORTHO05D003959 4.0e-110 402.1 214 90.2
Rhsim01G0123800 Rhododendron simsii HOM05D003212 ORTHO05D003959 4.0e-110 402.1 212 91.0
Medtr1g025060 Medicago truncatula HOM05D003212 ORTHO05D003959 5.2e-110 401.7 211 91.0
Ca_23514_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 8.9e-110 401.0 212 89.2
Psat0s1718g0040 Pisum sativum HOM05D003212 ORTHO05D003959 8.9e-110 401.0 214 89.7
ECA248G3712 Erigeron canadensis HOM05D003212 ORTHO05D003959 1.2e-109 400.6 214 89.3
AUR62003806 Chenopodium quinoa HOM05D003212 ORTHO05D003959 1.5e-109 400.2 212 90.6
Sabra03G0147800 Salix brachista HOM05D003212 ORTHO05D003959 2.0e-109 399.8 242 81.4
CAN.G745.39 Capsicum annuum HOM05D003212 ORTHO05D003959 2.6e-109 399.4 214 90.2
Aqoxy2G00340 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 4.4e-109 398.7 212 89.6
EL10Ac2g02822 Beta vulgaris HOM05D003212 ORTHO05D003959 4.4e-109 398.7 212 90.1
AUR62026849 Chenopodium quinoa HOM05D003212 ORTHO05D003959 4.4e-109 398.7 212 88.7
AUR62037200 Chenopodium quinoa HOM05D003212 ORTHO05D003959 4.4e-109 398.7 212 88.7
HanXRQChr01g0008251 Helianthus annuus HOM05D003212 ORTHO05D003959 4.4e-109 398.7 214 88.3
Solyc11g068830.2 Solanum lycopersicum HOM05D003212 ORTHO05D003959 5.7e-109 398.3 214 89.7
TAR369G1042 Trochodendron aralioides HOM05D003212 ORTHO05D003959 5.7e-109 398.3 212 89.2
Ca_10473_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 1.7e-108 396.7 214 89.3
PGSC0003DMG400019620 Solanum tuberosum HOM05D003212 ORTHO05D003959 1.7e-108 396.7 214 89.7
MELO3C005122.2 Cucumis melo HOM05D003212 ORTHO05D003959 2.9e-108 396.0 211 91.0
DCAR_006596 Daucus carota HOM05D003212 ORTHO05D003959 2.9e-108 396.0 212 90.1
Ah.12g062950 Amaranthus hybridus HOM05D003212 ORTHO05D003959 6.4e-108 394.8 214 87.4
Hma1.2p1_0384F.1_g141010 Hydrangea macrophylla HOM05D003212 ORTHO05D003959 8.3e-108 394.4 212 89.2
Nitab4.5_0001135g0170 Nicotiana tabacum HOM05D003212 ORTHO05D003959 8.3e-108 394.4 214 88.8
vmacro12692 Vaccinium macrocarpon HOM05D003212 ORTHO05D003959 8.3e-108 394.4 222 87.8
Lj7A581T52 Lonicera japonica HOM05D003212 ORTHO05D003959 2.4e-107 392.9 214 88.8
Nitab4.5_0000893g0050 Nicotiana tabacum HOM05D003212 ORTHO05D003959 2.4e-107 392.9 214 88.8
Sopen11g027550 Solanum pennellii HOM05D003212 ORTHO05D003959 3.2e-107 392.5 214 88.8
AUR62001997 Chenopodium quinoa HOM05D003212 ORTHO05D003959 9.2e-107 391.0 210 89.5
Medtr8g038390 Medicago truncatula HOM05D003212 ORTHO05D003959 1.6e-106 390.2 214 86.9
Migut.O00503 Erythranthe guttata HOM05D003212 ORTHO05D003959 2.0e-106 389.8 214 86.9
PSO339G4798 Papaver somniferum HOM05D003212 ORTHO05D003959 2.0e-106 389.8 214 85.5
PSO384G1532 Papaver somniferum HOM05D003212 ORTHO05D003959 2.7e-106 389.4 214 86.0
SGA_v2.0_scaffold232G43508 Striga asiatica HOM05D003212 ORTHO05D003959 2.7e-106 389.4 214 86.0
MSTRG.20521 Avicennia marina HOM05D003212 ORTHO05D003959 3.5e-106 389.0 210 87.6
Sabra01G0019400 Salix brachista HOM05D003212 ORTHO05D003959 1.7e-105 386.7 283 70.3
MD17G1257300 Malus domestica HOM05D003212 ORTHO05D003959 3.0e-105 386.0 211 87.7
Migut.B01220 Erythranthe guttata HOM05D003212 ORTHO05D003959 6.6e-105 384.8 214 86.4
HanXRQChr13g0406671 Helianthus annuus HOM05D003212 ORTHO05D003959 8.6e-105 384.4 216 84.7
SGA_v2.0_scaffold124G33627 Striga asiatica HOM05D003212 ORTHO05D003959 1.1e-104 384.0 224 83.5
Migut.N01834 Erythranthe guttata HOM05D003212 ORTHO05D003959 2.5e-104 382.9 214 86.9
Lsat_1_v5_gn_5_157360 Lactuca sativa HOM05D003212 ORTHO05D003959 2.5e-104 382.9 208 87.5
ATR0789G118 Amborella trichopoda HOM05D003212 ORTHO05D003959 4.3e-104 382.1 214 85.0
AT3G54470 Arabidopsis thaliana HOM05D003212 ORTHO05D003959 4.3e-104 382.1 212 85.8
Carub.0005s2109 Capsella rubella HOM05D003212 ORTHO05D003959 4.3e-104 382.1 212 86.3
Thhalv10010334m.g Eutrema salsugineum HOM05D003212 ORTHO05D003959 5.6e-104 381.7 212 86.3
AL5G35520 Arabidopsis lyrata HOM05D003212 ORTHO05D003959 7.3e-104 381.3 212 86.3
SalBow5G4847 Salvia bowleyana HOM05D003212 ORTHO05D003959 7.3e-104 381.3 252 75.4
A07p22130 Brassica napus HOM05D003212 ORTHO05D003959 9.5e-104 380.9 212 85.4
BraA07t29896Z Brassica rapa HOM05D003212 ORTHO05D003959 9.5e-104 380.9 212 85.4
Oeu002655.1 Olea europaea HOM05D003212 ORTHO05D003959 9.5e-104 380.9 207 87.9
Os01g0951200 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 1.2e-103 380.6 208 88.5
A04p05360 Brassica napus HOM05D003212 ORTHO05D003959 2.1e-103 379.8 212 85.4
BraA04t16236Z Brassica rapa HOM05D003212 ORTHO05D003959 2.1e-103 379.8 212 85.4
Aa31LG1G5360 Aethionema arabicum HOM05D003212 ORTHO05D003959 2.8e-103 379.4 212 86.3
HPP92_003235 Vanilla planifolia HOM05D003212 ORTHO05D003959 4.7e-103 378.6 214 84.6
BcaB02g07736 Brassica carinata HOM05D003212 ORTHO05D003959 6.2e-103 378.3 212 85.4
unitig_26.g9606 Utricularia gibba HOM05D003212 ORTHO05D003959 6.2e-103 378.3 210 86.2
BcaC08g44683 Brassica carinata HOM05D003212 ORTHO05D003959 1.1e-102 377.5 212 84.9
C06p22180 Brassica napus HOM05D003212 ORTHO05D003959 1.1e-102 377.5 212 84.9
BolC6t37404H Brassica oleracea HOM05D003212 ORTHO05D003959 1.1e-102 377.5 212 84.9
CARHR164370 Cardamine hirsuta HOM05D003212 ORTHO05D003959 1.4e-102 377.1 212 84.9
Sp5g07950 Schrenkiella parvula HOM05D003212 ORTHO05D003959 1.8e-102 376.7 212 84.4
BolC4t25379H Brassica oleracea HOM05D003212 ORTHO05D003959 5.2e-102 375.2 211 85.3
BcaC02g09067 Brassica carinata HOM05D003212 ORTHO05D003959 4.4e-101 372.1 211 84.8
C04p38050 Brassica napus HOM05D003212 ORTHO05D003959 4.4e-101 372.1 211 84.8
Os01g0951400 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 7.5e-101 371.3 208 84.1
CDE08G1532 Ceratophyllum demersum HOM05D003212 ORTHO05D003959 1.9e-99 366.7 210 83.3
CAN.G919.25 Capsicum annuum HOM05D003212 ORTHO05D003959 3.2e-99 365.9 214 84.6
Zm00001eb140930 Zea mays HOM05D003212 ORTHO05D003959 4.1e-99 365.5 208 83.2
Zm00001eb140940 Zea mays HOM05D003212 ORTHO05D003959 1.1e-96 357.5 208 82.7
ECA232G0145 Erigeron canadensis HOM05D003212 ORTHO05D003959 2.8e-95 352.8 214 80.8
Mapoly0052s0107 Marchantia polymorpha HOM05D003212 ORTHO05D003959 1.1e-94 350.9 207 79.7
Oeu056551.1 Olea europaea HOM05D003212 ORTHO05D003959 6.4e-92 341.7 186 88.7
Pp3c3_16990 Physcomitrium patens HOM05D003212 ORTHO05D003959 6.4e-92 341.7 207 78.7
AagrBONN_evm.TU.Sc2ySwM_117.3888 Anthoceros agrestis HOM05D003212 ORTHO05D003959 4.1e-91 339.0 208 77.4
CDE09G0923 Ceratophyllum demersum HOM05D003212 ORTHO05D003959 1.0e-89 334.3 210 77.6
GSVIVG01000654001 Vitis vinifera HOM05D003212 ORTHO05D003959 2.8e-87 326.2 183 85.8
FAN03G0414 Fragaria x ananassa HOM05D003212 ORTHO05D003959 2.9e-84 316.2 185 84.9
QL04p014894 Quercus lobata HOM05D003212 ORTHO05D003959 5.4e-83 312.0 160 93.1
SMO259G0031 Selaginella moellendorffii HOM05D003212 ORTHO05D003959 3.5e-82 309.3 208 70.7
CBR_g41363 Chara braunii HOM05D003212 ORTHO05D003959 1.1e-80 304.3 208 69.7
Hund13345 Selenicereus undatus HOM05D003212 ORTHO05D003959 1.8e-78 297.0 191 76.4
Eucgr.G03242 Eucalyptus grandis HOM05D003212 ORTHO05D003959 9.9e-77 291.2 162 85.8
Cre01.g048950 Chlamydomonas reinhardtii HOM05D003212 ORTHO05D003959 1.2e-74 284.3 210 63.8
Ca_02713_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 1.3e-73 280.8 163 84.7
PRCOL_00000883 Prasinoderma coloniale HOM05D003212 ORTHO05D003959 2.5e-72 276.6 207 62.3
MCO07G762 Micromonas commoda HOM05D003212 ORTHO05D003959 7.3e-72 275.0 210 62.9
TPR.G17794 Trifolium pratense HOM05D003212 ORTHO05D003959 4.8e-63 245.7 125 93.6
Pp3c13_16830 Physcomitrium patens HOM05D003212 ORTHO05D003959 1.8e-62 243.8 169 69.2
SalBow5G3827 Salvia bowleyana HOM05D003212 ORTHO05D003959 2.9e-60 236.5 194 67.0
SEGI_29745 Sequoiadendron giganteum HOM05D003212 ORTHO05D003959 3.5e-58 229.6 143 79.0
VMungo1215G0810 Vigna mungo HOM05D003212 ORTHO05D003959 5.1e-49 199.1 146 73.3
Atru.chr12.1029 Acer truncatum HOM05D003212 ORTHO05D003959 8.7e-49 198.4 111 86.5
SMO181G0021 Selaginella moellendorffii HOM05D003212 ORTHO05D003959 6.9e-46 188.7 206 49.0
Glyma.17G012702 Glycine max HOM05D003212 ORTHO05D003959 8.2e-39 165.2 81 93.8
HPP92_003231 Vanilla planifolia HOM05D003212 ORTHO05D003959 1.7e-36 157.5 89 86.5
Glyma.20G015500 Glycine max HOM05D003212 ORTHO05D003959 9.4e-35 151.8 83 84.3
SalBow5G1921 Salvia bowleyana HOM05D003212 ORTHO05D003959 2.4e-30 137.1 77 85.7
VMungo1309G2010 Vigna mungo HOM05D003212 ORTHO05D003959 4.5e-29 132.9 81 84.0
HPP92_003227 Vanilla planifolia HOM05D003212 ORTHO05D003959 2.8e-23 113.6 57 91.2
Aqoxy5G02061 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 1.0e-17 95.1 96 55.2
BcaC03g15881 Brassica carinata HOM05D003212 ORTHO05D017586 1.4e-17 94.7 71 71.8
Aqoxy4G01641 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 2.0e-13 80.9 52 78.8
BolC2t09647H Brassica oleracea HOM05D003212 ORTHO05D017586 2.7e-13 80.5 64 70.3
BolC8t48010H Brassica oleracea HOM05D003212 ORTHO05D039289 6.5e-12 75.9 44 77.3
A06p01790 Brassica napus HOM05D003212 ORTHO05D003959 8.5e-12 75.5 48 68.8
A07p17330 Brassica napus HOM05D003212 ORTHO05D003959 2.5e-11 73.9 48 66.7
QL04p014886 Quercus lobata HOM05D003212 ORTHO05D003959 3.0e-09 67.0 30 93.3
BolC6t37247H Brassica oleracea HOM05D003212 ORTHO05D017586 1.5e-08 64.7 51 66.7
BcaB05g24115 Brassica carinata HOM05D003212 ORTHO05D017537 7.5e-08 62.4 57 56.1
Ca_26080_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.7e-07 61.2 39 74.4
BcaB01g04040 Brassica carinata HOM05D003212 ORTHO05D017537 6.3e-07 59.3 57 54.4
SEGI_18734 Sequoiadendron giganteum HOM05D003212 ORTHO05D003959 8.3e-07 58.9 58 50.0
BcaC03g17911 Brassica carinata HOM05D003212 ORTHO05D017537 1.8e-06 57.8 34 82.4
SEGI_05174 Sequoiadendron giganteum HOM05D003212 ORTHO05D003959 2.4e-06 57.4 29 79.3
AL5G22950 Arabidopsis lyrata HOM05D003212 ORTHO05D003959 5.4e-06 56.2 42 69.0


User provided reference genes

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