Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc222.6 Carica papaya HOM05D006241 ORTHO05D007842 2.8e-40 167.9 72 100.0
Duzib116G0823 Durio zibethinus HOM05D006241 ORTHO05D007842 1.6e-35 152.1 70 91.4
Gorai.009G189100 Gossypium raimondii HOM05D006241 ORTHO05D007842 4.6e-35 150.6 70 90.0
Duzib093G0667 Durio zibethinus HOM05D006241 ORTHO05D007842 7.9e-35 149.8 70 90.0
Gohir.D01G094000 Gossypium hirsutum HOM05D006241 ORTHO05D007842 7.9e-35 149.8 70 90.0
Gorai.002G119300 Gossypium raimondii HOM05D006241 ORTHO05D007842 7.9e-35 149.8 70 90.0
Gohir.A01G107600 Gossypium hirsutum HOM05D006241 ORTHO05D007842 1.0e-34 149.4 70 90.0
Gohir.D05G183800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 1.8e-34 148.7 70 88.6
Gohir.A05G180800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 3.9e-34 147.5 70 88.6
Thecc.08G056300 Theobroma cacao HOM05D006241 ORTHO05D007842 5.1e-34 147.1 70 87.1
COL.COLO4_21601 Corchorus olitorius HOM05D006241 ORTHO05D007842 1.9e-33 145.2 72 87.5
Nn5g30908 Nelumbo nucifera HOM05D006241 ORTHO05D007842 5.6e-33 143.7 71 85.9
CiPaw.08G071900 Carya illinoinensis HOM05D006241 ORTHO05D007842 7.4e-33 143.3 70 85.7
Cc10_g00830 Coffea canephora HOM05D006241 ORTHO05D007842 2.1e-32 141.7 72 80.6
CiPaw.07G140100 Carya illinoinensis HOM05D006241 ORTHO05D007842 2.8e-32 141.4 71 85.9
Duzib041G0756 Durio zibethinus HOM05D006241 ORTHO05D007842 2.8e-32 141.4 70 84.3
CSS0008517 Camellia sinensis var. sinensis HOM05D006241 ORTHO05D007842 1.1e-31 139.4 73 80.8
THA.LOC104811457 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 1.1e-31 139.4 70 84.3
PGR031G1817 Punica granatum HOM05D006241 ORTHO05D007842 1.8e-31 138.7 72 84.7
THA.LOC109116669 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 2.4e-31 138.3 70 82.9
Eucgr.F01733 Eucalyptus grandis HOM05D006241 ORTHO05D007842 1.2e-30 136.0 63 88.9
Lalb_Chr17g0337811 Lupinus albus HOM05D006241 ORTHO05D007842 1.2e-30 136.0 68 85.3
QL02p013848 Quercus lobata HOM05D006241 ORTHO05D007842 1.2e-30 136.0 68 80.9
Aa31LG4G6300 Aethionema arabicum HOM05D006241 ORTHO05D007842 1.5e-30 135.6 70 82.9
FvH4_2g37630 Fragaria vesca HOM05D006241 ORTHO05D007842 1.5e-30 135.6 70 81.4
Lj3g0010530 Lotus japonicus HOM05D006241 ORTHO05D007842 2.0e-30 135.2 65 86.2
AL2G36270 Arabidopsis lyrata HOM05D006241 ORTHO05D007842 2.6e-30 134.8 72 79.2
AT1G76200 Arabidopsis thaliana HOM05D006241 ORTHO05D007842 2.6e-30 134.8 72 79.2
Prupe.1G355800 Prunus persica HOM05D006241 ORTHO05D007842 2.6e-30 134.8 64 84.4
CDE05G1511 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 4.5e-30 134.0 71 77.5
MELO3C017010.2 Cucumis melo HOM05D006241 ORTHO05D007842 5.8e-30 133.7 72 79.2
FAN15G0812 Fragaria x ananassa HOM05D006241 ORTHO05D007842 7.6e-30 133.3 70 80.0
arahy.Tifrunner.gnm1.ann1.1F1YZI Arachis hypogaea HOM05D006241 ORTHO05D007842 1.3e-29 132.5 66 83.3
arahy.Tifrunner.gnm1.ann1.1NSU2H Arachis hypogaea HOM05D006241 ORTHO05D007842 1.3e-29 132.5 66 83.3
arahy.Tifrunner.gnm1.ann1.4R2MNP Arachis hypogaea HOM05D006241 ORTHO05D007842 1.3e-29 132.5 66 83.3
arahy.Tifrunner.gnm1.ann1.L8CN1K Arachis hypogaea HOM05D006241 ORTHO05D007842 1.3e-29 132.5 66 83.3
CDE05G0950 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 1.3e-29 132.5 71 78.9
Ca_19011_v3 Cicer arietinum L. HOM05D006241 ORTHO05D007842 2.2e-29 131.7 66 83.3
Lalb_Chr10g0094931 Lupinus albus HOM05D006241 ORTHO05D007842 3.8e-29 131.0 69 81.2
Manes.05G136000 Manihot esculenta HOM05D006241 ORTHO05D007842 3.8e-29 131.0 64 84.4
Manes.18G006720 Manihot esculenta HOM05D006241 ORTHO05D007842 3.8e-29 131.0 64 82.8
CsaV3_4G037120 Cucumis sativus L. HOM05D006241 ORTHO05D007842 4.9e-29 130.6 73 80.8
Glyma.11G099500 Glycine max HOM05D006241 ORTHO05D007842 4.9e-29 130.6 66 83.3
Atru.chr13.161 Acer truncatum HOM05D006241 ORTHO05D007842 6.5e-29 130.2 72 77.8
Psat7g177480 Pisum sativum HOM05D006241 ORTHO05D007842 6.5e-29 130.2 66 84.8
Phvul.011G027800 Phaseolus vulgaris HOM05D006241 ORTHO05D007842 8.4e-29 129.8 65 84.6
Actinidia17033 Actinidia chinensis HOM05D006241 ORTHO05D007842 1.1e-28 129.4 67 80.6
CARHR069760 Cardamine hirsuta HOM05D006241 ORTHO05D007842 1.1e-28 129.4 70 77.1
Dinv31923 Davidia involucrata HOM05D006241 ORTHO05D007842 1.1e-28 129.4 65 83.1
TAR381G1678 Trochodendron aralioides HOM05D006241 ORTHO05D007842 1.4e-28 129.0 67 82.1
Potri.005G248600 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.9e-28 128.6 65 83.1
PSO357G0248 Papaver somniferum HOM05D006241 ORTHO05D007842 2.5e-28 128.3 64 81.2
Dinv39579 Davidia involucrata HOM05D006241 ORTHO05D007842 4.2e-28 127.5 65 81.5
PSO170G5266 Papaver somniferum HOM05D006241 ORTHO05D007842 4.2e-28 127.5 64 81.2
Actinidia15484 Actinidia chinensis HOM05D006241 ORTHO05D007842 7.1e-28 126.7 67 77.6
Cfa014051 Carpinus fangiana HOM05D006241 ORTHO05D007842 7.1e-28 126.7 63 79.4
CANSAT54G0965 Cannabis sativa HOM05D006241 ORTHO05D007842 9.3e-28 126.3 70 80.0
SGA_v2.0_scaffold25G11191 Striga asiatica HOM05D006241 ORTHO05D007842 9.3e-28 126.3 61 85.2
Ciclev10010113m.g Citrus clementina HOM05D006241 ORTHO05D007842 1.2e-27 125.9 67 77.6
TAR376G1175 Trochodendron aralioides HOM05D006241 ORTHO05D007842 1.2e-27 125.9 65 81.5
ATR0661G361 Amborella trichopoda HOM05D006241 ORTHO05D007842 1.6e-27 125.6 72 76.4
Glyma.12G025500 Glycine max HOM05D006241 ORTHO05D007842 3.5e-27 124.4 66 80.3
Potri.002G012700 Populus trichocarpa HOM05D006241 ORTHO05D007842 3.5e-27 124.4 65 80.0
Aqoxy6G01804 Aquilegia oxysepala HOM05D006241 ORTHO05D007842 6.0e-27 123.6 58 84.5
Sabra05G0192000 Salix brachista HOM05D006241 ORTHO05D007842 7.9e-27 123.2 65 78.5
Carub.0002s2310 Capsella rubella HOM05D006241 ORTHO05D007842 1.3e-26 122.5 72 75.0
Thhalv10019410m.g Eutrema salsugineum HOM05D006241 ORTHO05D007842 1.3e-26 122.5 70 77.1
Os05g0122900 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 1.3e-26 122.5 64 79.7
Sp5g31350 Schrenkiella parvula HOM05D006241 ORTHO05D007842 1.3e-26 122.5 72 75.0
BcaC08g47119 Brassica carinata HOM05D006241 ORTHO05D007842 3.9e-26 120.9 68 73.5
BcaC08g47281 Brassica carinata HOM05D006241 ORTHO05D007842 3.9e-26 120.9 68 73.5
A07p41770 Brassica napus HOM05D006241 ORTHO05D007842 3.9e-26 120.9 68 73.5
C06p50150 Brassica napus HOM05D006241 ORTHO05D007842 3.9e-26 120.9 68 73.5
BolC6t40055H Brassica oleracea HOM05D006241 ORTHO05D007842 3.9e-26 120.9 68 73.5
TWI12G0416 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 5.1e-26 120.6 65 76.9
CAN.G311.105 Capsicum annuum HOM05D006241 ORTHO05D007842 6.7e-26 120.2 65 76.9
TWI56G0163 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 6.7e-26 120.2 65 76.9
Migut.N03197 Erythranthe guttata HOM05D006241 ORTHO05D007842 8.7e-26 119.8 61 82.0
BcaC08g47115 Brassica carinata HOM05D006241 ORTHO05D007842 1.5e-25 119.0 72 72.2
BcaB02g07055 Brassica carinata HOM05D006241 ORTHO05D007842 1.9e-25 118.6 69 72.5
A07p28590 Brassica napus HOM05D006241 ORTHO05D007842 1.9e-25 118.6 69 72.5
Lsat_1_v5_gn_8_133721 Lactuca sativa HOM05D006241 ORTHO05D007842 3.3e-25 117.9 72 72.2
BraA07t31707Z Brassica rapa HOM05D006241 ORTHO05D007842 4.3e-25 117.5 68 72.1
PGSC0003DMG400009898 Solanum tuberosum HOM05D006241 ORTHO05D007842 5.7e-25 117.1 65 75.4
ECA248G1104 Erigeron canadensis HOM05D006241 ORTHO05D007842 1.6e-24 115.5 74 71.6
GSVIVG01008691001 Vitis vinifera HOM05D006241 ORTHO05D007842 4.8e-24 114.0 56 82.1
Zm00001eb294120 Zea mays HOM05D006241 ORTHO05D007842 6.2e-24 113.6 64 75.0
BraA07t30500Z Brassica rapa HOM05D006241 ORTHO05D007842 8.2e-24 113.2 69 69.6
BcaB05g24973 Brassica carinata HOM05D006241 ORTHO05D007842 1.8e-23 112.1 59 72.9
Zm00001eb356460 Zea mays HOM05D006241 ORTHO05D007842 1.8e-23 112.1 64 75.0
BcaC08g45539 Brassica carinata HOM05D006241 ORTHO05D007842 3.1e-23 111.3 69 68.1
C06p32170 Brassica napus HOM05D006241 ORTHO05D007842 3.1e-23 111.3 69 68.1
BolC6t38340H Brassica oleracea HOM05D006241 ORTHO05D007842 3.1e-23 111.3 69 68.1
BraA02t07081Z Brassica rapa HOM05D006241 ORTHO05D007842 2.0e-22 108.6 63 71.4
Os06g0725400 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 2.5e-20 101.7 64 73.4
AagrBONN_evm.TU.Sc2ySwM_117.850 Anthoceros agrestis HOM05D006241 ORTHO05D007842 2.1e-19 98.6 60 63.3
Pp3c21_21340 Physcomitrium patens HOM05D006241 ORTHO05D007842 1.3e-18 95.9 72 59.7
FAN20G1861 Fragaria x ananassa HOM05D006241 ORTHO05D007842 1.8e-18 95.5 49 81.6
Nitab4.5_0000588g0230 Nicotiana tabacum HOM05D006241 ORTHO05D007842 1.8e-18 95.5 50 80.0
VMungo1127G1075 Vigna mungo HOM05D006241 ORTHO05D007842 1.8e-18 95.5 52 76.9
MBI19_g43741_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 3.0e-18 94.7 48 79.2
RcHm_v2.0_Chr6g0304101 Rosa chinensis HOM05D006241 ORTHO05D007842 3.0e-18 94.7 49 81.6
MD08G1003800 Malus domestica HOM05D006241 ORTHO05D007842 3.9e-18 94.4 50 76.0
Pp3c18_1920 Physcomitrium patens HOM05D006241 ORTHO05D007842 3.9e-18 94.4 71 59.2
HPP92_021050 Vanilla planifolia HOM05D006241 ORTHO05D007842 3.9e-18 94.4 52 78.8
MD15G1003400 Malus domestica HOM05D006241 ORTHO05D007842 1.9e-17 92.0 49 75.5
Hund08526 Selenicereus undatus HOM05D006241 ORTHO05D007842 1.6e-16 89.0 52 76.9
HanXRQChr17g0555751 Helianthus annuus HOM05D006241 ORTHO05D007842 6.3e-16 87.0 49 73.5
Mapoly0103s0030 Marchantia polymorpha HOM05D006241 ORTHO05D007842 6.3e-16 87.0 58 58.6
HanXRQChr17g0554651 Helianthus annuus HOM05D006241 ORTHO05D007842 8.2e-16 86.7 49 71.4
Mapoly0108s0047 Marchantia polymorpha HOM05D006241 ORTHO05D007842 8.2e-16 86.7 58 58.6
BolC2t09367H Brassica oleracea HOM05D006241 ORTHO05D007842 2.2e-13 78.6 51 66.7
SalBow6G4847 Salvia bowleyana HOM05D006241 ORTHO05D007842 6.5e-13 77.0 52 71.2
Sabra07G0051400 Salix brachista HOM05D006241 ORTHO05D349851 1.6e-11 72.4 49 65.3
ClCG05G015200 Citrullus lanatus HOM05D006241 ORTHO05D007842 3.6e-11 71.2 36 80.6
Nn6g31777 Nelumbo nucifera HOM05D006241 ORTHO05D007842 4.6e-11 70.9 40 72.5
vmacro04395 Vaccinium macrocarpon HOM05D006241 ORTHO05D007842 6.1e-11 70.5 35 80.0
DCAR_013903 Daucus carota HOM05D006241 ORTHO05D007842 1.4e-10 69.3 53 60.4
Sed0002381 Sechium edule HOM05D006241 ORTHO05D007842 1.8e-10 68.9 36 77.8
AUR62015196 Chenopodium quinoa HOM05D006241 ORTHO05D007842 3.3e-09 64.7 35 77.1
AUR62017658 Chenopodium quinoa HOM05D006241 ORTHO05D007842 3.3e-09 64.7 35 77.1
MBI19_g35281_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 4.3e-09 64.3 33 72.7
Ah.01g013010 Amaranthus hybridus HOM05D006241 ORTHO05D007842 5.7e-09 63.9 35 77.1
Medtr4g075160 Medicago truncatula HOM05D006241 ORTHO05D007842 9.7e-09 63.2 37 75.7
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 2.8e-08 61.6 37 70.3
Ah.01g001690 Amaranthus hybridus HOM05D006241 ORTHO05D007842 1.4e-07 59.3 34 73.5
DCAR_016755 Daucus carota HOM05D006241 ORTHO05D007842 6.9e-07 57.0 35 71.4


User provided reference genes

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