Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2206.1 Carica papaya HOM05D004313 ORTHO05D005036 5.8e-25 116.7 57 100.0
FAN04G0114 Fragaria x ananassa HOM05D004313 ORTHO05D005036 7.9e-22 106.3 57 91.2
FAN08G2034 Fragaria x ananassa HOM05D004313 ORTHO05D005036 7.9e-22 106.3 57 91.2
FAN13G2316 Fragaria x ananassa HOM05D004313 ORTHO05D005036 7.9e-22 106.3 57 91.2
FAN18G3297 Fragaria x ananassa HOM05D004313 ORTHO05D005036 7.9e-22 106.3 57 91.2
RcHm_v2.0_Chr7g0180041 Rosa chinensis HOM05D004313 ORTHO05D005036 7.9e-22 106.3 57 91.2
GSVIVG01007840001 Vitis vinifera HOM05D004313 ORTHO05D005036 7.9e-22 106.3 57 91.2
ClCG06G016580 Citrullus lanatus HOM05D004313 ORTHO05D005036 1.8e-21 105.1 57 89.5
FvH4_5g16030 Fragaria vesca HOM05D004313 ORTHO05D005036 2.3e-21 104.8 57 89.5
MD06G1183500 Malus domestica HOM05D004313 ORTHO05D005036 3.0e-21 104.4 57 89.5
CANSAT80G2445 Cannabis sativa HOM05D004313 ORTHO05D005036 5.1e-21 103.6 57 87.7
CAN.G628.58 Capsicum annuum HOM05D004313 ORTHO05D005036 6.7e-21 103.2 57 89.5
Nitab4.5_0000758g0080 Nicotiana tabacum HOM05D004313 ORTHO05D005036 6.7e-21 103.2 57 89.5
Potri.012G073600 Populus trichocarpa HOM05D004313 ORTHO05D005036 6.7e-21 103.2 57 89.5
Prupe.5G182200 Prunus persica HOM05D004313 ORTHO05D005036 6.7e-21 103.2 57 87.7
Atru.chr9.2370 Acer truncatum HOM05D004313 ORTHO05D005036 8.7e-21 102.8 57 87.7
Hma1.2p1_0002F.1_g003010 Hydrangea macrophylla HOM05D004313 ORTHO05D005036 8.7e-21 102.8 57 89.5
MD14G1189400 Malus domestica HOM05D004313 ORTHO05D005036 8.7e-21 102.8 57 87.7
Aa31LG11G1040 Aethionema arabicum HOM05D004313 ORTHO05D005036 1.9e-20 101.7 57 87.7
Sed0007676 Sechium edule HOM05D004313 ORTHO05D005036 1.9e-20 101.7 57 89.5
CARHR276380 Cardamine hirsuta HOM05D004313 ORTHO05D005036 2.5e-20 101.3 57 87.7
Haze_06373 Corylus avellana HOM05D004313 ORTHO05D005036 2.5e-20 101.3 57 86.0
Haze_07414 Corylus avellana HOM05D004313 ORTHO05D005036 2.5e-20 101.3 57 86.0
CsaV3_1G001930 Cucumis sativus L. HOM05D004313 ORTHO05D005036 2.5e-20 101.3 57 86.0
Lj9A456G24 Lonicera japonica HOM05D004313 ORTHO05D005036 2.5e-20 101.3 57 87.7
Nitab4.5_0000003g0130 Nicotiana tabacum HOM05D004313 ORTHO05D005036 2.5e-20 101.3 57 87.7
QL10p014006 Quercus lobata HOM05D004313 ORTHO05D005036 2.5e-20 101.3 57 86.0
AL8G39490 Arabidopsis lyrata HOM05D004313 ORTHO05D005036 4.3e-20 100.5 57 86.0
CSS0019418 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 4.3e-20 100.5 57 86.0
Cc04_g16080 Coffea canephora HOM05D004313 ORTHO05D005036 4.3e-20 100.5 57 84.2
Thhalv10003602m.g Eutrema salsugineum HOM05D004313 ORTHO05D005036 4.3e-20 100.5 57 87.7
Gohir.A07G071100 Gossypium hirsutum HOM05D004313 ORTHO05D005036 4.3e-20 100.5 57 84.2
Gorai.001G079800 Gossypium raimondii HOM05D004313 ORTHO05D005036 4.3e-20 100.5 57 84.2
Manes.06G098800 Manihot esculenta HOM05D004313 ORTHO05D005036 4.3e-20 100.5 57 86.0
Thecc.03G071100 Theobroma cacao HOM05D004313 ORTHO05D005036 4.3e-20 100.5 57 84.2
Cfa019038 Carpinus fangiana HOM05D004313 ORTHO05D005036 5.7e-20 100.1 57 84.2
Ca_21869_v3 Cicer arietinum L. HOM05D004313 ORTHO05D005036 5.7e-20 100.1 57 86.0
THA.LOC104818250 Tarenaya hassleriana HOM05D004313 ORTHO05D005036 5.7e-20 100.1 57 86.0
BcaC04g23404 Brassica carinata HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 86.0
A09p07780 Brassica napus HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 86.0
C09p08680 Brassica napus HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 86.0
BolC9t53779H Brassica oleracea HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 86.0
BraA09t36426Z Brassica rapa HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 86.0
Glyma.17G094800 Glycine max HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 84.2
Phvul.003G195400 Phaseolus vulgaris HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 86.0
Solyc06g071200.3 Solanum lycopersicum HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 86.0
Sopen06g027510 Solanum pennellii HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 86.0
TPR.G38443 Trifolium pratense HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 86.0
VMungo1215G1877 Vigna mungo HOM05D004313 ORTHO05D005036 7.4e-20 99.8 57 86.0
MELO3C017136.2 Cucumis melo HOM05D004313 ORTHO05D005036 9.7e-20 99.4 57 84.2
Gohir.D07G075600 Gossypium hirsutum HOM05D004313 ORTHO05D005036 9.7e-20 99.4 57 82.5
Potri.015G068600 Populus trichocarpa HOM05D004313 ORTHO05D005036 9.7e-20 99.4 57 84.2
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 1.3e-19 99.0 57 86.0
CiPaw.11G034400 Carya illinoinensis HOM05D004313 ORTHO05D005036 1.3e-19 99.0 57 84.2
Glyma.05G031900 Glycine max HOM05D004313 ORTHO05D005036 1.3e-19 99.0 57 84.2
Lj4g0005973 Lotus japonicus HOM05D004313 ORTHO05D005036 1.3e-19 99.0 57 86.0
Lalb_Chr07g0182441 Lupinus albus HOM05D004313 ORTHO05D005036 1.3e-19 99.0 57 84.2
Medtr4g107290 Medicago truncatula HOM05D004313 ORTHO05D005036 1.3e-19 99.0 57 86.0
THA.LOC104819430 Tarenaya hassleriana HOM05D004313 ORTHO05D005036 1.3e-19 99.0 57 86.0
vmacro19341 Vaccinium macrocarpon HOM05D004313 ORTHO05D005036 1.3e-19 99.0 57 86.0
arahy.Tifrunner.gnm1.ann1.PL6DWX Arachis hypogaea HOM05D004313 ORTHO05D005036 1.6e-19 98.6 57 84.2
arahy.Tifrunner.gnm1.ann1.ZX441X Arachis hypogaea HOM05D004313 ORTHO05D005036 1.6e-19 98.6 57 84.2
BcaNung01388 Brassica carinata HOM05D004313 ORTHO05D005036 1.6e-19 98.6 57 84.2
A06p29280 Brassica napus HOM05D004313 ORTHO05D005036 1.6e-19 98.6 57 86.0
C03p64200 Brassica napus HOM05D004313 ORTHO05D005036 1.6e-19 98.6 57 86.0
BolC3t18678H Brassica oleracea HOM05D004313 ORTHO05D005036 1.6e-19 98.6 57 86.0
BraA06t25884Z Brassica rapa HOM05D004313 ORTHO05D005036 1.6e-19 98.6 57 86.0
AT5G62600 Arabidopsis thaliana HOM05D004313 ORTHO05D005036 2.2e-19 98.2 57 84.2
Carub.0008s2330 Capsella rubella HOM05D004313 ORTHO05D005036 2.2e-19 98.2 57 84.2
Dinv07987 Davidia involucrata HOM05D004313 ORTHO05D005036 2.2e-19 98.2 56 87.5
Psat4g054720 Pisum sativum HOM05D004313 ORTHO05D005036 2.2e-19 98.2 57 84.2
SalBow3G4066 Salvia bowleyana HOM05D004313 ORTHO05D005036 2.2e-19 98.2 57 80.7
TWI81G0241 Tripterygium wilfordii HOM05D004313 ORTHO05D005036 2.8e-19 97.8 57 84.2
Ciclev10018728m.g Citrus clementina HOM05D004313 ORTHO05D005036 3.7e-19 97.4 57 84.2
DCAR_031273 Daucus carota HOM05D004313 ORTHO05D005036 3.7e-19 97.4 57 82.5
Eucgr.B00381 Eucalyptus grandis HOM05D004313 ORTHO05D005036 3.7e-19 97.4 57 84.2
Peaxi162Scf00689g00546 Petunia axillaris HOM05D004313 ORTHO05D005036 3.7e-19 97.4 57 84.2
CiPaw.12G022100 Carya illinoinensis HOM05D004313 ORTHO05D005036 4.8e-19 97.1 57 82.5
CSS0038251 Camellia sinensis var. sinensis HOM05D004313 ORTHO05D005036 6.3e-19 96.7 64 78.1
AUR62021785 Chenopodium quinoa HOM05D004313 ORTHO05D005036 8.2e-19 96.3 56 83.9
COL.COLO4_07633 Corchorus olitorius HOM05D004313 ORTHO05D005036 8.2e-19 96.3 57 80.7
Sp2g25780 Schrenkiella parvula HOM05D004313 ORTHO05D005036 8.2e-19 96.3 57 82.5
TWI60G1492 Tripterygium wilfordii HOM05D004313 ORTHO05D005036 8.2e-19 96.3 57 82.5
TAR629G1960 Trochodendron aralioides HOM05D004313 ORTHO05D005036 8.2e-19 96.3 57 82.5
Actinidia37681 Actinidia chinensis HOM05D004313 ORTHO05D005036 1.4e-18 95.5 57 82.5
unitig_21.g20456 Utricularia gibba HOM05D004313 ORTHO05D005036 1.8e-18 95.1 57 80.7
MSTRG.4395 Avicennia marina HOM05D004313 ORTHO05D005036 2.4e-18 94.7 57 80.7
AUR62008311 Chenopodium quinoa HOM05D004313 ORTHO05D005036 3.1e-18 94.4 56 82.1
Dinv13117 Davidia involucrata HOM05D004313 ORTHO05D005036 3.1e-18 94.4 57 84.2
Rhsim08G0163500 Rhododendron simsii HOM05D004313 ORTHO05D005036 3.1e-18 94.4 57 82.5
Migut.D01890 Erythranthe guttata HOM05D004313 ORTHO05D005036 4.1e-18 94.0 57 78.9
Nn4g22972 Nelumbo nucifera HOM05D004313 ORTHO05D005036 5.3e-18 93.6 57 82.5
Duzib084G0573 Durio zibethinus HOM05D004313 ORTHO05D005036 9.0e-18 92.8 57 77.2
HanXRQChr09g0271451 Helianthus annuus HOM05D004313 ORTHO05D005036 9.0e-18 92.8 57 80.7
Sc12g0005870 Simmondsia chinensis HOM05D004313 ORTHO05D005036 1.2e-17 92.4 56 80.4
Ah.11g045580 Amaranthus hybridus HOM05D004313 ORTHO05D005036 1.5e-17 92.0 56 80.4
SGA_v2.0_scaffold114G31867 Striga asiatica HOM05D004313 ORTHO05D005036 1.5e-17 92.0 57 77.2
ECA232G1058 Erigeron canadensis HOM05D004313 ORTHO05D005036 2.0e-17 91.7 57 78.9
Lsat_1_v5_gn_4_106321 Lactuca sativa HOM05D004313 ORTHO05D005036 2.0e-17 91.7 57 78.9
TAR374G1555 Trochodendron aralioides HOM05D004313 ORTHO05D005036 2.6e-17 91.3 57 78.9
Hund09391 Selenicereus undatus HOM05D004313 ORTHO05D005036 3.4e-17 90.9 56 78.6
MBI18_g11289_MAGBIO Magnolia biondii HOM05D004313 ORTHO05D005036 4.5e-17 90.5 55 80.0
MBI18_g11290_MAGBIO Magnolia biondii HOM05D004313 ORTHO05D005036 4.5e-17 90.5 55 80.0
EL10Ac5g10873 Beta vulgaris HOM05D004313 ORTHO05D005036 5.9e-17 90.1 56 78.6
PSO591G0306 Papaver somniferum HOM05D004313 ORTHO05D005036 7.6e-17 89.7 57 73.7
PSO832G0682 Papaver somniferum HOM05D004313 ORTHO05D005036 7.6e-17 89.7 57 73.7
Aqoxy3G03179 Aquilegia oxysepala HOM05D004313 ORTHO05D005036 1.4e-15 85.5 56 71.4
SHI08465 Sapria himalayana HOM05D004313 ORTHO05D005036 5.5e-15 83.6 56 75.0
SEGI_36637 Sequoiadendron giganteum HOM05D004313 ORTHO05D005036 9.3e-15 82.8 57 66.7
CDE05G2166 Ceratophyllum demersum HOM05D004313 ORTHO05D005036 6.1e-14 80.1 57 64.9
Os10g0477800 Oryza sativa ssp. japonica HOM05D004313 ORTHO05D005036 1.8e-13 78.6 57 66.7
ATR0322G074 Amborella trichopoda HOM05D004313 ORTHO05D005036 5.1e-13 77.0 55 67.3
HPP92_025605 Vanilla planifolia HOM05D004313 ORTHO05D005036 8.8e-13 76.3 55 67.3
arahy.Tifrunner.gnm1.ann1.225J64 Arachis hypogaea HOM05D004313 ORTHO05D005036 2.5e-12 74.7 49 75.5
Zm00001eb045810 Zea mays HOM05D004313 ORTHO05D005036 3.3e-12 74.3 57 61.4
Zm00001eb221820 Zea mays HOM05D004313 ORTHO05D005036 3.3e-12 74.3 57 61.4
unitig_744.g24392 Utricularia gibba HOM05D004313 ORTHO05D005036 1.8e-10 68.6 48 70.8
Mapoly0187s0007 Marchantia polymorpha HOM05D004313 ORTHO05D005036 6.9e-10 66.6 57 50.9
BcaC01g02491 Brassica carinata HOM05D004313 ORTHO05D005036 5.9e-09 63.5 57 61.4
SMO144G0109 Selaginella moellendorffii HOM05D004313 ORTHO05D005036 2.2e-08 61.6 56 53.6
CBR_g24406 Chara braunii HOM05D004313 ORTHO05D005036 6.5e-08 60.1 59 50.8
Cre02.g097250 Chlamydomonas reinhardtii HOM05D004313 ORTHO05D005036 6.5e-08 60.1 57 54.4
Pp3c11_11570 Physcomitrium patens HOM05D004313 ORTHO05D005036 1.1e-07 59.3 56 48.2


User provided reference genes

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