Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc22.80 Carica papaya HOM05D004530 ORTHO05D005839 2.1e-80 302.4 163 100.0
QL04p030285 Quercus lobata HOM05D004530 ORTHO05D005839 4.5e-30 135.2 196 49.5
Ciclev10019258m.g Citrus clementina HOM05D004530 ORTHO05D005839 2.9e-29 132.5 200 45.0
TWI14G0541 Tripterygium wilfordii HOM05D004530 ORTHO05D005839 2.1e-27 126.3 199 43.2
Atru.chr5.126 Acer truncatum HOM05D004530 ORTHO05D005839 1.4e-26 123.6 199 42.7
Thecc.01G394900 Theobroma cacao HOM05D004530 ORTHO05D005839 1.5e-25 120.2 201 43.8
COL.COLO4_12407 Corchorus olitorius HOM05D004530 ORTHO05D005839 2.0e-25 119.8 201 43.3
CiPaw.13G026100 Carya illinoinensis HOM05D004530 ORTHO05D005839 1.3e-24 117.1 168 47.6
TWI59G1339 Tripterygium wilfordii HOM05D004530 ORTHO05D005839 1.3e-24 117.1 200 42.0
Duzib138G0269 Durio zibethinus HOM05D004530 ORTHO05D005839 1.7e-24 116.7 199 43.2
GSVIVG01018280001 Vitis vinifera HOM05D004530 ORTHO05D005839 3.7e-24 115.5 193 44.6
Duzib133G0606 Durio zibethinus HOM05D004530 ORTHO05D005839 2.4e-23 112.8 200 41.0
Potri.014G047600 Populus trichocarpa HOM05D004530 ORTHO05D005839 1.2e-22 110.5 199 41.2
Gohir.A08G138600 Gossypium hirsutum HOM05D004530 ORTHO05D005839 4.5e-22 108.6 202 42.1
Haze_02848 Corylus avellana HOM05D004530 ORTHO05D005839 7.8e-22 107.8 193 42.0
Eucgr.E01549 Eucalyptus grandis HOM05D004530 ORTHO05D005839 1.0e-21 107.5 198 39.4
Gorai.004G166100 Gossypium raimondii HOM05D004530 ORTHO05D005839 2.9e-21 105.9 201 41.3
Manes.01G274600 Manihot esculenta HOM05D004530 ORTHO05D005839 3.9e-21 105.5 200 39.5
Sabra14G0034600 Salix brachista HOM05D004530 ORTHO05D005839 6.6e-21 104.8 199 39.2
MD02G1212800 Malus domestica HOM05D004530 ORTHO05D005839 1.1e-20 104.0 178 39.3
MD07G1109200 Malus domestica HOM05D004530 ORTHO05D005839 1.1e-20 104.0 199 40.2
Lj3g0003084 Lotus japonicus HOM05D004530 ORTHO05D005839 4.3e-20 102.1 179 42.5
Cfa011069 Carpinus fangiana HOM05D004530 ORTHO05D005839 9.5e-20 100.9 81 66.7
FAN03G1354 Fragaria x ananassa HOM05D004530 ORTHO05D005839 8.0e-19 97.8 196 38.3
FvH4_7g10200 Fragaria vesca HOM05D004530 ORTHO05D005839 1.0e-18 97.4 196 39.3
TPR.G33134 Trifolium pratense HOM05D004530 ORTHO05D005839 1.4e-18 97.1 191 39.8
arahy.Tifrunner.gnm1.ann1.WR8IC8 Arachis hypogaea HOM05D004530 ORTHO05D005839 1.8e-18 96.7 194 41.2
FAN10G4098 Fragaria x ananassa HOM05D004530 ORTHO05D005839 1.8e-18 96.7 196 38.3
FAN06G2217 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.3e-18 96.3 196 39.3
FAN01G0552 Fragaria x ananassa HOM05D004530 ORTHO05D005839 3.1e-18 95.9 196 39.3
Psat4g224840 Pisum sativum HOM05D004530 ORTHO05D005839 3.1e-18 95.9 191 38.2
FAN06G5079 Fragaria x ananassa HOM05D004530 ORTHO05D005839 4.0e-18 95.5 196 38.8
Medtr8g006895 Medicago truncatula HOM05D004530 ORTHO05D005839 4.0e-18 95.5 195 38.5
FAN10G1666 Fragaria x ananassa HOM05D004530 ORTHO05D005839 8.9e-18 94.4 196 37.8
Hma1.2p1_0041F.1_g025350 Hydrangea macrophylla HOM05D004530 ORTHO05D005839 8.9e-18 94.4 201 38.8
EL10Ac1g00762 Beta vulgaris HOM05D004530 ORTHO05D005839 1.2e-17 94.0 197 37.6
Ca_25804_v3 Cicer arietinum L. HOM05D004530 ORTHO05D005839 2.0e-17 93.2 192 38.0
PGR042G2176 Punica granatum HOM05D004530 ORTHO05D005839 3.4e-17 92.4 201 34.8
TAR375G0493 Trochodendron aralioides HOM05D004530 ORTHO05D005839 3.4e-17 92.4 199 38.7
Glyma.10G120400 Glycine max HOM05D004530 ORTHO05D005839 5.8e-17 91.7 191 39.8
arahy.Tifrunner.gnm1.ann1.BH8PB4 Arachis hypogaea HOM05D004530 ORTHO05D005839 9.8e-17 90.9 194 40.2
Phvul.010G049900 Phaseolus vulgaris HOM05D004530 ORTHO05D005839 2.9e-16 89.4 196 36.2
Ah.05g173100 Amaranthus hybridus HOM05D004530 ORTHO05D005839 4.9e-16 88.6 196 36.2
ClCG05G000120 Citrullus lanatus HOM05D004530 ORTHO05D005839 6.4e-16 88.2 80 62.5
Hma1.2p1_0041F.1_g025340 Hydrangea macrophylla HOM05D004530 ORTHO05D005839 8.3e-16 87.8 83 57.8
Aqoxy7G00763 Aquilegia oxysepala HOM05D004530 ORTHO05D005839 2.4e-15 86.3 85 55.3
Gohir.A12G097000 Gossypium hirsutum HOM05D004530 ORTHO05D005839 4.1e-15 85.5 147 43.5
Hund27405 Selenicereus undatus HOM05D004530 ORTHO05D005839 4.1e-15 85.5 187 36.4
vmacro13497 Vaccinium macrocarpon HOM05D004530 ORTHO05D005839 7.0e-15 84.7 199 37.2
AUR62023408 Chenopodium quinoa HOM05D004530 ORTHO05D005839 9.2e-15 84.3 86 51.2
AUR62043872 Chenopodium quinoa HOM05D004530 ORTHO05D005839 6.0e-14 81.6 188 35.6
MELO3C005943.2 Cucumis melo HOM05D004530 ORTHO05D005839 6.0e-14 81.6 191 37.7
TAR629G3313 Trochodendron aralioides HOM05D004530 ORTHO05D005839 7.8e-14 81.3 199 35.2
Gorai.008G108800 Gossypium raimondii HOM05D004530 ORTHO05D005839 1.3e-13 80.5 192 35.9
Lalb_Chr12g0210571 Lupinus albus HOM05D004530 ORTHO05D005839 1.3e-13 80.5 193 36.8
PSO732G0778 Papaver somniferum HOM05D004530 ORTHO05D005839 1.7e-13 80.1 201 33.3
AUR62013743 Chenopodium quinoa HOM05D004530 ORTHO05D005839 2.3e-13 79.7 202 33.2
Rhsim07G0036000 Rhododendron simsii HOM05D004530 ORTHO05D005839 2.3e-13 79.7 199 36.7
Gohir.D12G099900 Gossypium hirsutum HOM05D004530 ORTHO05D005839 3.0e-13 79.3 192 36.5
PSO675G1201 Papaver somniferum HOM05D004530 ORTHO05D005839 5.0e-13 78.6 201 31.8
Sed0010787 Sechium edule HOM05D004530 ORTHO05D005839 6.6e-13 78.2 158 39.2
CsaV3_3G007220 Cucumis sativus L. HOM05D004530 ORTHO05D005839 8.6e-13 77.8 192 37.0
Glyma.20G070800 Glycine max HOM05D004530 ORTHO05D005839 1.5e-12 77.0 176 38.6
Nn1g00849 Nelumbo nucifera HOM05D004530 ORTHO05D005839 4.3e-12 75.5 198 33.8
RcHm_v2.0_Chr1g0347921 Rosa chinensis HOM05D004530 ORTHO05D005839 4.3e-12 75.5 169 34.3
Ah.05g174020 Amaranthus hybridus HOM05D004530 ORTHO05D005839 1.2e-11 73.9 75 49.3
Hund17085 Selenicereus undatus HOM05D004530 ORTHO05D005839 1.6e-11 73.6 199 34.2
Gorai.004G070300 Gossypium raimondii HOM05D004530 ORTHO05D005839 6.2e-11 71.6 75 52.0
Cc00_g35630 Coffea canephora HOM05D004530 ORTHO05D005839 1.1e-10 70.9 86 47.7
PSO832G0798 Papaver somniferum HOM05D004530 ORTHO05D005839 1.1e-10 70.9 189 31.2
MSTRG.20690 Avicennia marina HOM05D004530 ORTHO05D005839 1.4e-10 70.5 179 31.8
ATR0057G115 Amborella trichopoda HOM05D004530 ORTHO05D005839 1.8e-10 70.1 76 44.7
Nn6g33827 Nelumbo nucifera HOM05D004530 ORTHO05D005839 1.8e-10 70.1 198 30.8
Actinidia12143 Actinidia chinensis HOM05D004530 ORTHO05D005839 2.3e-10 69.7 200 33.5
Migut.B01535 Erythranthe guttata HOM05D004530 ORTHO05D005839 2.3e-10 69.7 197 32.5
Lalb_Chr07g0195421 Lupinus albus HOM05D004530 ORTHO05D005839 2.3e-10 69.7 192 34.4
CSS0024507 Camellia sinensis var. sinensis HOM05D004530 ORTHO05D005839 3.1e-10 69.3 188 31.9
Aa31LG1G11480 Aethionema arabicum HOM05D004530 ORTHO05D005839 8.9e-10 67.8 166 36.1
CSS0020970 Camellia sinensis var. sinensis HOM05D004530 ORTHO05D005839 8.9e-10 67.8 188 31.4
SGA_v2.0_scaffold52G19226 Striga asiatica HOM05D004530 ORTHO05D005839 8.9e-10 67.8 79 49.4
VMungo0331G0336 Vigna mungo HOM05D004530 ORTHO05D005839 1.5e-09 67.0 179 33.5
Peaxi162Scf00475g00418 Petunia axillaris HOM05D004530 ORTHO05D005839 2.0e-09 66.6 200 30.0
A10p00110 Brassica napus HOM05D004530 ORTHO05D005839 5.8e-09 65.1 164 32.3
C05p00080 Brassica napus HOM05D004530 ORTHO05D005839 5.8e-09 65.1 164 32.3
BolC5t28795H Brassica oleracea HOM05D004530 ORTHO05D005839 5.8e-09 65.1 164 32.3
BraA10t42289Z Brassica rapa HOM05D004530 ORTHO05D005839 5.8e-09 65.1 164 32.3
Lj7A546T15 Lonicera japonica HOM05D004530 ORTHO05D005839 5.8e-09 65.1 85 40.0
BcaB03g13633 Brassica carinata HOM05D004530 ORTHO05D005839 2.9e-08 62.8 164 34.1
Dinv44062 Davidia involucrata HOM05D004530 ORTHO05D005839 3.7e-08 62.4 175 36.0
THA.LOC104817000 Tarenaya hassleriana HOM05D004530 ORTHO05D005839 3.7e-08 62.4 192 32.3
Solyc01g090230.3 Solanum lycopersicum HOM05D004530 ORTHO05D005839 4.9e-08 62.0 181 32.0
DCAR_029469 Daucus carota HOM05D004530 ORTHO05D005839 8.3e-08 61.2 197 31.0
SalBow5G0820 Salvia bowleyana HOM05D004530 ORTHO05D005839 2.4e-07 59.7 193 29.5
Sopen01g036030 Solanum pennellii HOM05D004530 ORTHO05D005839 3.2e-07 59.3 182 32.4
CAN.G1473.6 Capsicum annuum HOM05D004530 ORTHO05D005839 2.7e-06 56.2 185 31.9
ECA240G1126 Erigeron canadensis HOM05D004530 ORTHO05D005839 4.6e-06 55.5 185 31.9
Thhalv10007106m.g Eutrema salsugineum HOM05D004530 ORTHO05D005839 6.0e-06 55.1 164 33.5
Lsat_1_v5_gn_3_126420 Lactuca sativa HOM05D004530 ORTHO05D005839 7.8e-06 54.7 182 30.8


User provided reference genes

Program Settings