Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc211.4 Carica papaya HOM05D003041 ORTHO05D003400 1.7e-35 152.1 77 100.0
QL01p002017 Quercus lobata HOM05D003041 ORTHO05D003400 7.4e-15 83.6 62 64.5
CiPaw.05G248500 Carya illinoinensis HOM05D003041 ORTHO05D003400 1.2e-12 76.3 63 58.7
Cpa.g.sc211.3 Carica papaya HOM05D003041 ORTHO05D003400 2.0e-12 75.5 59 57.6
Gohir.A03G122700 Gossypium hirsutum HOM05D003041 ORTHO05D003400 3.4e-12 74.7 49 67.3
Gohir.D02G145300 Gossypium hirsutum HOM05D003041 ORTHO05D003400 3.4e-12 74.7 49 67.3
Gorai.005G162700 Gossypium raimondii HOM05D003041 ORTHO05D003400 3.4e-12 74.7 49 67.3
Atru.chr1.911 Acer truncatum HOM05D003041 ORTHO05D003400 4.5e-12 74.3 69 59.4
COL.COLO4_20466 Corchorus olitorius HOM05D003041 ORTHO05D003400 4.5e-12 74.3 61 59.0
COL.COLO4_20468 Corchorus olitorius HOM05D003041 ORTHO05D003400 4.5e-12 74.3 61 59.0
Atru.chr4.801 Acer truncatum HOM05D003041 ORTHO05D003400 7.7e-12 73.6 71 57.7
CiPaw.05G248400 Carya illinoinensis HOM05D003041 ORTHO05D003400 1.7e-11 72.4 47 66.0
Duzib268G0521 Durio zibethinus HOM05D003041 ORTHO05D003400 1.7e-11 72.4 75 52.0
Manes.15G126800 Manihot esculenta HOM05D003041 ORTHO05D003400 2.9e-11 71.6 56 57.1
Thecc.02G279900 Theobroma cacao HOM05D003041 ORTHO05D003400 2.9e-11 71.6 63 55.6
CANSAT01G2422 Cannabis sativa HOM05D003041 ORTHO05D003400 3.8e-11 71.2 48 70.8
Haze_11021 Corylus avellana HOM05D003041 ORTHO05D003400 5.0e-11 70.9 63 54.0
vmacro10637 Vaccinium macrocarpon HOM05D003041 ORTHO05D003400 5.0e-11 70.9 62 58.1
Lj5g0012593 Lotus japonicus HOM05D003041 ORTHO05D003400 1.1e-10 69.7 76 47.4
Lalb_Chr21g0308461 Lupinus albus HOM05D003041 ORTHO05D003400 1.1e-10 69.7 54 57.4
TWI31G0694 Tripterygium wilfordii HOM05D003041 ORTHO05D003400 1.1e-10 69.7 70 48.6
TPR.G13860 Trifolium pratense HOM05D003041 ORTHO05D003400 1.4e-10 69.3 47 63.8
Ca_27464_v3 Cicer arietinum L. HOM05D003041 ORTHO05D003400 1.9e-10 68.9 63 49.2
Duzib251G0338 Durio zibethinus HOM05D003041 ORTHO05D003400 1.9e-10 68.9 75 52.0
Medtr1g107555 Medicago truncatula HOM05D003041 ORTHO05D003400 1.9e-10 68.9 55 54.5
Peaxi162Scf00205g00119 Petunia axillaris HOM05D003041 ORTHO05D003400 1.9e-10 68.9 68 50.0
BcaB03g14866 Brassica carinata HOM05D003041 ORTHO05D003400 2.5e-10 68.6 65 50.8
A07p37470 Brassica napus HOM05D003041 ORTHO05D003400 3.2e-10 68.2 65 52.3
C06p45170 Brassica napus HOM05D003041 ORTHO05D003400 3.2e-10 68.2 65 52.3
BolC6t39573H Brassica oleracea HOM05D003041 ORTHO05D003400 3.2e-10 68.2 65 52.3
BraA07t31304Z Brassica rapa HOM05D003041 ORTHO05D003400 3.2e-10 68.2 65 52.3
Cfa008593 Carpinus fangiana HOM05D003041 ORTHO05D003400 3.2e-10 68.2 63 54.0
Sp5g26210 Schrenkiella parvula HOM05D003041 ORTHO05D003400 3.2e-10 68.2 65 52.3
CAN.G1334.9 Capsicum annuum HOM05D003041 ORTHO05D003400 4.2e-10 67.8 75 44.0
Glyma.20G126500 Glycine max HOM05D003041 ORTHO05D003400 4.2e-10 67.8 65 50.8
Phvul.007G038200 Phaseolus vulgaris HOM05D003041 ORTHO05D003400 4.2e-10 67.8 46 63.0
Carub.0001s2251 Capsella rubella HOM05D003041 ORTHO05D003400 7.2e-10 67.0 75 48.0
VMungo0720G1513 Vigna mungo HOM05D003041 ORTHO05D003400 7.2e-10 67.0 61 52.5
AT1G71040 Arabidopsis thaliana HOM05D003041 ORTHO05D003400 9.4e-10 66.6 65 50.8
FAN17G2366 Fragaria x ananassa HOM05D003041 ORTHO05D003400 9.4e-10 66.6 62 51.6
AL2G30610 Arabidopsis lyrata HOM05D003041 ORTHO05D003400 1.2e-09 66.2 65 50.8
COL.COLO4_20467 Corchorus olitorius HOM05D003041 ORTHO05D003400 1.2e-09 66.2 47 59.6
FAN07G1313 Fragaria x ananassa HOM05D003041 ORTHO05D003400 1.2e-09 66.2 62 50.0
Cc11_g08850 Coffea canephora HOM05D003041 ORTHO05D003400 1.6e-09 65.9 62 53.2
Lj5g0011691 Lotus japonicus HOM05D003041 ORTHO05D003400 1.6e-09 65.9 76 46.1
Sabra10G0084200 Salix brachista HOM05D003041 ORTHO05D003400 1.6e-09 65.9 70 42.9
BcaC05g26213 Brassica carinata HOM05D003041 ORTHO05D003400 2.1e-09 65.5 66 53.0
BolC5t30923H Brassica oleracea HOM05D003041 ORTHO05D003400 2.1e-09 65.5 66 53.0
DCAR_023612 Daucus carota HOM05D003041 ORTHO05D003400 2.1e-09 65.5 44 65.9
Eucgr.G02197 Eucalyptus grandis HOM05D003041 ORTHO05D003400 2.1e-09 65.5 59 50.8
Eucgr.L03602 Eucalyptus grandis HOM05D003041 ORTHO05D003400 2.1e-09 65.5 59 50.8
FvH4_4g32270 Fragaria vesca HOM05D003041 ORTHO05D003400 2.1e-09 65.5 62 50.0
FAN12G2939 Fragaria x ananassa HOM05D003041 ORTHO05D003400 2.1e-09 65.5 62 50.0
MD13G1026500 Malus domestica HOM05D003041 ORTHO05D003400 2.1e-09 65.5 61 52.5
Oeu045878.1 Olea europaea HOM05D003041 ORTHO05D003400 2.1e-09 65.5 47 61.7
Potri.010G114200 Populus trichocarpa HOM05D003041 ORTHO05D003400 2.1e-09 65.5 47 55.3
TWI31G0001 Tripterygium wilfordii HOM05D003041 ORTHO05D003400 2.1e-09 65.5 70 47.1
Atru.chr11.396 Acer truncatum HOM05D003041 ORTHO05D003400 2.7e-09 65.1 59 52.5
CSS0038717 Camellia sinensis var. sinensis HOM05D003041 ORTHO05D003400 2.7e-09 65.1 70 47.1
A09p41710 Brassica napus HOM05D003041 ORTHO05D003400 3.6e-09 64.7 66 51.5
Dinv05160 Davidia involucrata HOM05D003041 ORTHO05D003400 3.6e-09 64.7 63 49.2
Duzib248G0865 Durio zibethinus HOM05D003041 ORTHO05D003400 3.6e-09 64.7 44 68.2
MD13G1026600 Malus domestica HOM05D003041 ORTHO05D003400 3.6e-09 64.7 65 50.8
Nn3g18197 Nelumbo nucifera HOM05D003041 ORTHO05D003400 3.6e-09 64.7 47 55.3
Atru.chr11.1539 Acer truncatum HOM05D003041 ORTHO05D003400 4.6e-09 64.3 59 50.8
BraA09t39660Z Brassica rapa HOM05D003041 ORTHO05D003400 4.6e-09 64.3 66 51.5
DCAR_030214 Daucus carota HOM05D003041 ORTHO05D003400 4.6e-09 64.3 62 53.2
Sp1g20470 Schrenkiella parvula HOM05D003041 ORTHO05D003400 4.6e-09 64.3 66 51.5
Sopen05g004120 Solanum pennellii HOM05D003041 ORTHO05D003400 4.6e-09 64.3 56 48.2
C05p22220 Brassica napus HOM05D003041 ORTHO05D003400 6.1e-09 63.9 66 50.0
Carub.0002s1785 Capsella rubella HOM05D003041 ORTHO05D003400 6.1e-09 63.9 66 50.0
CARHR023390 Cardamine hirsuta HOM05D003041 ORTHO05D003400 6.1e-09 63.9 63 50.8
AT1G23010 Arabidopsis thaliana HOM05D003041 ORTHO05D003400 7.9e-09 63.5 63 50.8
Haze_11020 Corylus avellana HOM05D003041 ORTHO05D003400 7.9e-09 63.5 69 47.8
arahy.Tifrunner.gnm1.ann1.TA5AS1 Arachis hypogaea HOM05D003041 ORTHO05D003400 1.0e-08 63.2 62 53.2
arahy.Tifrunner.gnm1.ann1.YRV6S7 Arachis hypogaea HOM05D003041 ORTHO05D003400 1.0e-08 63.2 62 53.2
RcHm_v2.0_Chr4g0441061 Rosa chinensis HOM05D003041 ORTHO05D003400 1.0e-08 63.2 75 46.7
PGSC0003DMG400030551 Solanum tuberosum HOM05D003041 ORTHO05D003400 1.0e-08 63.2 51 52.9
GSVIVG01011773001 Vitis vinifera HOM05D003041 ORTHO05D003400 1.0e-08 63.2 63 50.8
GSVIVG01011776001 Vitis vinifera HOM05D003041 ORTHO05D003400 1.0e-08 63.2 63 50.8
Aa31LG4G10010 Aethionema arabicum HOM05D003041 ORTHO05D003400 1.4e-08 62.8 57 49.1
MSTRG.891 Avicennia marina HOM05D003041 ORTHO05D003400 1.4e-08 62.8 47 59.6
Lalb_Chr21g0308441 Lupinus albus HOM05D003041 ORTHO05D003400 1.4e-08 62.8 54 50.0
Prupe.1G323200 Prunus persica HOM05D003041 ORTHO05D003400 1.4e-08 62.8 47 59.6
AL1G36580 Arabidopsis lyrata HOM05D003041 ORTHO05D003400 2.3e-08 62.0 63 50.8
CSS0013684 Camellia sinensis var. sinensis HOM05D003041 ORTHO05D003400 2.3e-08 62.0 47 57.4
Thhalv10007182m.g Eutrema salsugineum HOM05D003041 ORTHO05D003400 2.3e-08 62.0 66 50.0
Thhalv10018329m.g Eutrema salsugineum HOM05D003041 ORTHO05D003400 2.3e-08 62.0 69 44.9
Glyma.10G263800 Glycine max HOM05D003041 ORTHO05D003400 2.3e-08 62.0 75 48.0
MD16G1029700 Malus domestica HOM05D003041 ORTHO05D003400 2.3e-08 62.0 65 47.7
PGR119G1292 Punica granatum HOM05D003041 ORTHO05D003400 2.3e-08 62.0 63 46.0
Aa31LG7G7020 Aethionema arabicum HOM05D003041 ORTHO05D003400 3.0e-08 61.6 67 53.7
EL10Ac6g14235 Beta vulgaris HOM05D003041 ORTHO05D003400 3.0e-08 61.6 70 42.9
Lalb_Chr02g0145381 Lupinus albus HOM05D003041 ORTHO05D003400 3.0e-08 61.6 63 46.0
Nn4g24113 Nelumbo nucifera HOM05D003041 ORTHO05D003400 3.0e-08 61.6 47 53.2
THA.LOC104823018 Tarenaya hassleriana HOM05D003041 ORTHO05D003400 3.0e-08 61.6 53 54.7
CARHR064330 Cardamine hirsuta HOM05D003041 ORTHO05D003400 3.9e-08 61.2 36 72.2
Psat6g220240 Pisum sativum HOM05D003041 ORTHO05D003400 3.9e-08 61.2 72 47.2
Ciclev10025245m.g Citrus clementina HOM05D003041 ORTHO05D003400 5.1e-08 60.8 75 41.3
Migut.L00984 Erythranthe guttata HOM05D003041 ORTHO05D003400 6.7e-08 60.5 61 52.5
MBI16_g05921_MAGBIO Magnolia biondii HOM05D003041 ORTHO05D003400 8.8e-08 60.1 46 54.3
Ciclev10014737m.g Citrus clementina HOM05D003041 ORTHO05D003400 1.1e-07 59.7 76 44.7
PSO017G6219 Papaver somniferum HOM05D003041 ORTHO05D003400 1.1e-07 59.7 54 50.0
BcaB07g32299 Brassica carinata HOM05D003041 ORTHO05D003400 1.5e-07 59.3 52 55.8
Aqoxy7G02484 Aquilegia oxysepala HOM05D003041 ORTHO05D003400 2.6e-07 58.5 54 51.9
CDE02G4174 Ceratophyllum demersum HOM05D003041 ORTHO05D003400 2.6e-07 58.5 76 42.1
QL01p002000 Quercus lobata HOM05D003041 ORTHO05D003400 2.6e-07 58.5 62 45.2
SGA_v2.0_scaffold38G15066 Striga asiatica HOM05D003041 ORTHO05D003400 2.6e-07 58.5 62 50.0
TAR622G0413 Trochodendron aralioides HOM05D003041 ORTHO05D003400 2.6e-07 58.5 75 40.0
Actinidia14958 Actinidia chinensis HOM05D003041 ORTHO05D003400 3.3e-07 58.2 47 51.1
Hma1.2p1_0464F.1_g158300 Hydrangea macrophylla HOM05D003041 ORTHO05D003400 3.3e-07 58.2 63 50.8
Actinidia14957 Actinidia chinensis HOM05D003041 ORTHO05D003400 4.4e-07 57.8 47 51.1
HanXRQChr15g0488641 Helianthus annuus HOM05D003041 ORTHO05D003400 1.3e-06 56.2 75 40.0
PGR119G0930 Punica granatum HOM05D003041 ORTHO05D003400 1.3e-06 56.2 63 41.3
SalBow8G4352 Salvia bowleyana HOM05D003041 ORTHO05D003400 1.3e-06 56.2 47 51.1
Hund28920 Selenicereus undatus HOM05D003041 ORTHO05D003400 1.7e-06 55.8 73 35.6
Hund28921 Selenicereus undatus HOM05D003041 ORTHO05D003400 1.7e-06 55.8 73 35.6
MSTRG.7628 Avicennia marina HOM05D003041 ORTHO05D003400 2.2e-06 55.5 73 47.9
PSO478G3228 Papaver somniferum HOM05D003041 ORTHO05D003400 2.2e-06 55.5 54 46.3
Sc14g0007190 Simmondsia chinensis HOM05D003041 ORTHO05D003400 2.2e-06 55.5 63 42.9
SHI04700 Sapria himalayana HOM05D003041 ORTHO05D003400 3.7e-06 54.7 44 54.5
SEGI_12055 Sequoiadendron giganteum HOM05D003041 ORTHO05D003400 3.7e-06 54.7 69 44.9
CsaV3_5G017570 Cucumis sativus L. HOM05D003041 ORTHO05D003400 4.8e-06 54.3 55 49.1
Cfa008595 Carpinus fangiana HOM05D003041 ORTHO05D003400 6.3e-06 53.9 36 63.9


User provided reference genes

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