Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc210.14 Carica papaya HOM05D000004 ORTHO05D000563 3.6e-70 268.1 129 100.0
Cpa.g.sc0.189 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-54 216.1 122 83.6
Cpa.g.sc38.14 Carica papaya HOM05D000004 ORTHO05D000563 4.7e-54 214.5 122 83.6
Cpa.g.sc2219.1 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-53 211.1 122 82.8
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-53 211.1 122 82.8
Cpa.g.sc225.3 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-52 208.0 122 81.1
Cpa.g.sc3434.1 Carica papaya HOM05D000004 ORTHO05D000563 4.8e-51 204.5 122 83.6
Cpa.g.sc3092.1 Carica papaya HOM05D000004 ORTHO05D000563 5.3e-50 201.1 114 82.5
Cpa.g.sc138.37 Carica papaya HOM05D000004 ORTHO05D000563 9.1e-50 200.3 122 77.9
Cpa.g.sc225.2 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-47 193.0 109 81.7
Cpa.g.sc303.7 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-47 192.6 122 78.7
Cpa.g.sc28.97 Carica papaya HOM05D000004 ORTHO05D000563 2.5e-47 192.2 111 82.0
Cpa.g.sc60.61 Carica papaya HOM05D000004 ORTHO05D000563 9.4e-47 190.3 112 81.2
Cpa.g.sc225.10 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-45 186.8 109 79.8
Cpa.g.sc181.6 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-45 186.4 104 83.7
Cpa.g.sc143.13 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-42 176.0 118 75.4
Cpa.g.sc303.1 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-41 173.3 101 83.2
Cpa.g.sc32.165 Carica papaya HOM05D000004 ORTHO05D000563 5.0e-40 167.9 122 70.5
Cpa.g.sc17.151 Carica papaya HOM05D000004 ORTHO05D000002 1.1e-39 166.8 122 70.5
Cpa.g.sc28.154 Carica papaya HOM05D000004 ORTHO05D000563 7.2e-39 164.1 122 68.9
Cpa.g.sc219.4 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-37 157.9 113 69.9
Cpa.g.sc32.166 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-32 143.7 122 63.1
Cpa.g.sc28.153 Carica papaya HOM05D000004 ORTHO05D000563 9.5e-31 137.1 122 60.7
Cpa.g.sc11.81 Carica papaya HOM05D000004 ORTHO05D000563 6.8e-29 131.0 76 81.6
Cpa.g.sc172.1 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-24 116.7 72 79.2
Cpa.g.sc79.56 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-22 109.8 68 80.9
Cpa.g.sc38.2 Carica papaya HOM05D000004 ORTHO05D000002 6.8e-21 104.4 69 73.9
Cpa.g.sc88.2 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-20 103.2 127 42.5
Cpa.g.sc303.3 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-20 102.1 63 77.8
Cpa.g.sc172.3 Carica papaya HOM05D000004 ORTHO05D000002 6.4e-19 97.8 64 75.0
TAR452G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000563 6.4e-19 97.8 126 50.8
Cpa.g.sc32.162 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-18 96.3 105 51.4
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-18 95.9 122 46.7
Cpa.g.sc1555.1 Carica papaya HOM05D000004 ORTHO05D000563 7.0e-18 94.4 47 91.5
Cpa.g.sc44.39 Carica papaya HOM05D000004 ORTHO05D000563 9.2e-18 94.0 88 61.4
SHI54914 Sapria himalayana HOM05D000004 ORTHO05D009927 1.2e-17 93.6 111 50.5
PGR031G0364 Punica granatum HOM05D000004 ORTHO05D000002 2.7e-17 92.4 125 42.4
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 2.7e-17 92.4 125 44.0
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 5.9e-17 91.3 131 42.0
PGR102G0770 Punica granatum HOM05D000004 ORTHO05D000002 5.9e-17 91.3 125 43.2
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 7.8e-17 90.9 130 40.8
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 1.0e-16 90.5 130 41.5
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 1.0e-16 90.5 130 41.5
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.0e-16 89.0 131 41.2
Cpa.g.sc159.2 Carica papaya HOM05D000004 ORTHO05D000563 3.9e-16 88.6 47 89.4
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 5.0e-16 88.2 131 42.0
SHI40193 Sapria himalayana HOM05D000004 ORTHO05D000002 8.6e-16 87.4 97 51.5
Cpa.g.sc79.57 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-15 87.0 51 80.4
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-15 87.0 130 40.8
PGR004G2489 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-15 86.7 125 42.4
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-15 86.7 130 40.8
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.5e-15 86.7 118 42.4
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.5e-15 86.7 118 42.4
Cpa.g.sc30.31 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-15 86.3 109 46.8
PGR004G2150 Punica granatum HOM05D000004 ORTHO05D000002 1.9e-15 86.3 125 41.6
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 2.5e-15 85.9 110 45.5
Cpa.g.sc118.8 Carica papaya HOM05D000004 ORTHO05D000563 3.3e-15 85.5 108 40.7
PGR027G0001 Punica granatum HOM05D000004 ORTHO05D000002 4.3e-15 85.1 136 41.9
PGR042G1478 Punica granatum HOM05D000004 ORTHO05D000002 5.6e-15 84.7 136 40.4
PGR142G0162 Punica granatum HOM05D000004 ORTHO05D000002 5.6e-15 84.7 136 40.4
PGR044G0528 Punica granatum HOM05D000004 ORTHO05D000002 7.3e-15 84.3 125 40.8
PGR083G1943 Punica granatum HOM05D000004 ORTHO05D000002 7.3e-15 84.3 136 40.4
SHI47489 Sapria himalayana HOM05D000004 ORTHO05D000002 7.3e-15 84.3 111 47.7
Cpa.g.sc210.17 Carica papaya HOM05D000004 ORTHO05D000002 9.5e-15 84.0 47 85.1
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 9.5e-15 84.0 136 39.7
THA.LOC104822532 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.5e-15 84.0 118 41.5
Cpa.g.sc225.5 Carica papaya HOM05D000004 ORTHO05D000002 1.2e-14 83.6 47 85.1
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-14 83.6 136 39.7
Cpa.g.sc39.68 Carica papaya HOM05D000004 ORTHO05D000002 1.6e-14 83.2 47 80.9
Cpa.g.sc1318.2 Carica papaya HOM05D000004 ORTHO05D000563 2.8e-14 82.4 47 83.0
Cpa.g.sc15.97 Carica papaya HOM05D000004 ORTHO05D000002 2.8e-14 82.4 47 83.0
Cpa.g.sc123.47 Carica papaya HOM05D000004 ORTHO05D000002 4.7e-14 81.6 47 83.0
Cpa.g.sc2472.1 Carica papaya HOM05D000004 ORTHO05D000002 4.7e-14 81.6 45 84.4
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 4.7e-14 81.6 51 76.5
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 4.7e-14 81.6 136 39.7
PGR085G0003 Punica granatum HOM05D000004 ORTHO05D000002 4.7e-14 81.6 136 39.0
PGR085G0005 Punica granatum HOM05D000004 ORTHO05D000002 4.7e-14 81.6 136 39.0
Cpa.g.sc1083.2 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-13 80.5 47 80.9
PGR029G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.3e-13 79.3 136 38.2
PGR029G0003 Punica granatum HOM05D000004 ORTHO05D000002 2.3e-13 79.3 136 38.2
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 2.3e-13 79.3 136 38.2
PGR029G0005 Punica granatum HOM05D000004 ORTHO05D000002 2.3e-13 79.3 136 38.2
PGR085G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.3e-13 79.3 136 38.2
PGR085G0002 Punica granatum HOM05D000004 ORTHO05D000002 2.3e-13 79.3 136 38.2
PGR085G0004 Punica granatum HOM05D000004 ORTHO05D000002 2.3e-13 79.3 136 38.2
PGR085G0006 Punica granatum HOM05D000004 ORTHO05D000002 2.3e-13 79.3 136 38.2
Cpa.g.sc1364.2 Carica papaya HOM05D000004 ORTHO05D000002 4.0e-13 78.6 47 76.6
Cpa.g.sc11.80 Carica papaya HOM05D000004 ORTHO05D000002 5.2e-13 78.2 47 78.7
Cpa.g.sc3165.1 Carica papaya HOM05D000004 ORTHO05D000002 6.8e-13 77.8 45 80.0
Cpa.g.sc207.14 Carica papaya HOM05D000004 ORTHO05D000002 1.2e-12 77.0 47 80.9
Cpa.g.sc207.15 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-12 76.6 47 78.7
QL10p037628 Quercus lobata HOM05D000004 ORTHO05D000002 7.5e-12 74.3 71 56.3
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 1.7e-11 73.2 103 40.8
SHI46426 Sapria himalayana HOM05D000004 ORTHO05D000563 2.2e-11 72.8 100 46.0
Cpa.g.sc0.193 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-11 72.4 45 75.6
PGR042G0073 Punica granatum HOM05D000004 ORTHO05D000002 2.9e-11 72.4 130 36.9
MSTRG.25509 Avicennia marina HOM05D000004 ORTHO05D000002 4.9e-11 71.6 82 50.0
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-11 71.2 42 78.6
PGR142G4213 Punica granatum HOM05D000004 ORTHO05D000002 8.3e-11 70.9 139 34.5
MSTRG.20800 Avicennia marina HOM05D000004 ORTHO05D000563 1.1e-10 70.5 82 47.6
Cpa.g.sc31.27 Carica papaya HOM05D000004 ORTHO05D000002 1.1e-10 70.5 47 72.3
THA.LOC104810159 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.9e-10 69.7 122 34.4
THA.LOC104818554 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.9e-10 69.7 121 34.7
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 2.4e-10 69.3 82 48.8
Cpa.g.sc2836.1 Carica papaya HOM05D000004 ORTHO05D000002 3.2e-10 68.9 123 39.0
Cpa.g.sc56.12 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-10 68.6 109 43.1
THA.LOC104818534 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.1e-10 68.6 97 42.3
Cpa.g.sc391.4 Carica papaya HOM05D000004 ORTHO05D000563 9.2e-10 67.4 42 73.8
Cpa.g.sc28.107 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-09 66.2 41 78.0
Cpa.g.sc210.9 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-09 65.9 42 76.2
TPR.G17086 Trifolium pratense HOM05D000004 ORTHO05D000002 3.5e-09 65.5 75 42.7
Cpa.g.sc440.2 Carica papaya HOM05D000004 ORTHO05D000563 6.0e-09 64.7 39 76.9
THA.LOC109116729 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.8e-09 64.3 118 42.4
Cpa.g.sc35.74 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-08 63.9 73 45.2
Cpa.g.sc440.3 Carica papaya HOM05D000004 ORTHO05D000002 1.0e-08 63.9 47 70.2
Cpa.g.sc95.80 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-08 63.5 95 40.0
THA.LOC109116034 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.3e-08 63.5 121 32.2
Cpa.g.sc210.11 Carica papaya HOM05D000004 ORTHO05D000563 2.3e-08 62.8 41 70.7
BNapus_Darmor_BZH_scaffold_75p00020 Brassica napus HOM05D000004 ORTHO05D000563 3.9e-08 62.0 108 37.0
SHI01386 Sapria himalayana HOM05D000004 ORTHO05D000002 5.0e-08 61.6 60 51.7
Cpa.g.sc445.1 Carica papaya HOM05D000004 ORTHO05D000002 6.6e-08 61.2 34 79.4
Sed0009597 Sechium edule HOM05D010826 ORTHO05D013073 8.6e-08 60.8 123 35.8
Cpa.g.sc1555.3 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-07 60.1 37 73.0
Cpa.g.sc31.87 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-07 60.1 68 45.6
Cpa.g.sc33.141 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-07 60.1 116 35.3
Cpa.g.sc100.20 Carica papaya HOM05D000004 ORTHO05D011645 1.9e-07 59.7 65 47.7
Cpa.g.sc127.13 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.7 90 37.8
Cpa.g.sc210.8 Carica papaya HOM05D000004 ORTHO05D000002 1.9e-07 59.7 34 79.4
Cpa.g.sc15.23 Carica papaya HOM05D000004 ORTHO05D000563 2.5e-07 59.3 68 45.6
Cpa.g.sc4.120 Carica papaya HOM05D000004 ORTHO05D000563 3.3e-07 58.9 100 40.0
SHI33460 Sapria himalayana HOM05D000004 ORTHO05D000563 3.3e-07 58.9 105 38.1
Cpa.g.sc243.3 Carica papaya HOM05D000004 ORTHO05D011645 5.6e-07 58.2 118 38.1
Cpa.g.sc484.2 Carica papaya HOM05D000004 ORTHO05D011645 5.6e-07 58.2 94 39.4
Cpa.g.sc69.22 Carica papaya HOM05D000004 ORTHO05D011645 5.6e-07 58.2 68 45.6
QL11p008013 Quercus lobata HOM05D000004 ORTHO05D000563 7.3e-07 57.8 83 44.6
THA.LOC109117175 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.3e-07 57.8 114 36.8
Cpa.g.sc582.1 Carica papaya HOM05D000004 ORTHO05D011645 9.5e-07 57.4 118 37.3
A10p21760 Brassica napus HOM05D008327 ORTHO05D010589 1.2e-06 57.0 93 34.4
Lalb_Chr19g0128701 Lupinus albus HOM05D000004 ORTHO05D000002 1.2e-06 57.0 117 34.2
SHI47394 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-06 57.0 94 40.4
THA.LOC104818535 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.2e-06 57.0 123 31.7
THA.LOC109115991 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.2e-06 57.0 114 36.8
THA.LOC109116954 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.2e-06 57.0 119 34.5
Cpa.g.sc153.23 Carica papaya HOM05D000004 ORTHO05D011645 1.6e-06 56.6 90 38.9
THA.LOC104800025 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.6e-06 56.6 114 36.8
A07p07150 Brassica napus HOM05D008327 ORTHO05D010589 2.1e-06 56.2 93 34.4
A08p07840 Brassica napus HOM05D008327 ORTHO05D010589 2.1e-06 56.2 100 33.0
BNapus_Darmor_BZH_scaffold_242p00020 Brassica napus HOM05D008327 ORTHO05D010589 2.1e-06 56.2 100 33.0
BNapus_Darmor_BZH_scaffold_51p00090 Brassica napus HOM05D008327 ORTHO05D010589 2.1e-06 56.2 100 33.0
Cpa.g.sc100.28 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 56.2 98 33.7
THA.LOC104816126 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.1e-06 56.2 103 35.0
THA.LOC104821189 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.1e-06 56.2 93 36.6
A08p07830 Brassica napus HOM05D008327 ORTHO05D010589 3.6e-06 55.5 100 33.0
BNapus_Darmor_BZH_scaffold_51p00150 Brassica napus HOM05D008327 ORTHO05D010589 3.6e-06 55.5 100 33.0
BNapus_Darmor_BZH_scaffold_51p00160 Brassica napus HOM05D008327 ORTHO05D010589 3.6e-06 55.5 100 33.0
BNapus_Darmor_BZH_scaffold_75p00030 Brassica napus HOM05D008327 ORTHO05D010589 3.6e-06 55.5 100 33.0
Cpa.g.sc38.36 Carica papaya HOM05D000004 ORTHO05D000563 3.6e-06 55.5 113 35.4
THA.LOC104800357 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.6e-06 55.5 105 37.1
THA.LOC104822353 Tarenaya hassleriana HOM05D000442 ORTHO05D001979 3.6e-06 55.5 49 53.1
Cpa.g.sc31.29 Carica papaya HOM05D000004 ORTHO05D000563 4.7e-06 55.1 57 47.4
SHI45547 Sapria himalayana HOM05D000004 ORTHO05D000563 4.7e-06 55.1 94 40.4
SHI50602 Sapria himalayana HOM05D000004 ORTHO05D000002 4.7e-06 55.1 116 36.2
THA.LOC104800054 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.7e-06 55.1 97 37.1
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.7e-06 55.1 58 46.6
THA.LOC109117145 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.7e-06 55.1 86 37.2
SHI45492 Sapria himalayana HOM05D000004 ORTHO05D000002 6.2e-06 54.7 94 40.4
THA.LOC104815187 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.2e-06 54.7 73 39.7
THA.LOC109117167 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.2e-06 54.7 73 42.5
BolC6t36422H Brassica oleracea HOM05D008290 ORTHO05D011151 8.1e-06 54.3 88 37.5
Cpa.g.sc102.31 Carica papaya HOM05D000004 ORTHO05D000563 8.1e-06 54.3 31 77.4
Cpa.g.sc15.39 Carica papaya HOM05D000004 ORTHO05D000563 8.1e-06 54.3 116 36.2
Sopen05g017590 Solanum pennellii HOM05D000004 ORTHO05D000002 8.1e-06 54.3 89 39.3


User provided reference genes

Program Settings