Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 7.1e-36 153.7 94 100.0
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 2.3e-18 95.5 90 72.2
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 1.1e-17 93.2 90 71.1
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 1.5e-17 92.8 94 70.2
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 2.5e-17 92.0 86 73.3
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 3.3e-17 91.7 90 68.9
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 3.3e-17 91.7 89 61.8
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 3.3e-17 91.7 90 70.0
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 9.7e-17 90.1 86 72.1
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 9.7e-17 90.1 86 72.1
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 2.2e-16 89.0 83 72.3
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.8e-16 88.6 88 61.4
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 4.8e-16 87.8 82 74.4
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 4.8e-16 87.8 90 68.9
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 4.8e-16 87.8 88 60.2
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 6.3e-16 87.4 90 62.2
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 8.2e-16 87.0 93 65.6
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 8.2e-16 87.0 85 70.6
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 1.1e-15 86.7 85 70.6
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 1.1e-15 86.7 89 64.0
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 1.8e-15 85.9 58 69.0
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 3.1e-15 85.1 93 65.6
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 1.2e-14 83.2 96 65.6
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 1.2e-14 83.2 96 65.6
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 1.2e-14 83.2 91 67.0
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 1.5e-14 82.8 85 68.2
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 1.5e-14 82.8 85 68.2
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 5.9e-14 80.9 83 69.9
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 5.9e-14 80.9 87 67.8
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 5.9e-14 80.9 90 64.4
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 7.7e-14 80.5 58 69.0
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 1.3e-13 79.7 84 66.7
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 1.3e-13 79.7 89 58.4
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 2.2e-13 79.0 90 65.6
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 2.9e-13 78.6 92 62.0
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 5.0e-13 77.8 90 64.4
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 5.0e-13 77.8 83 66.3
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 6.5e-13 77.4 96 58.3
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 6.5e-13 77.4 84 71.4
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 8.5e-13 77.0 57 57.9
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 8.5e-13 77.0 84 71.4
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 1.9e-12 75.9 84 67.9
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 1.9e-12 75.9 83 68.7
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 1.9e-12 75.9 58 55.2
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 4.2e-12 74.7 84 66.7
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 5.5e-12 74.3 82 65.9
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 5.5e-12 74.3 82 65.9
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 1.2e-11 73.2 89 60.7
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 1.2e-11 73.2 89 55.1
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 1.6e-11 72.8 57 57.9
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 2.1e-11 72.4 58 58.6
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 2.1e-11 72.4 57 61.4
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 2.1e-11 72.4 57 61.4
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 2.7e-11 72.0 82 62.2
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.0e-10 70.1 89 57.3
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 1.4e-10 69.7 87 59.8
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 1.8e-10 69.3 83 63.9
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 1.8e-10 69.3 87 60.9
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 2.3e-10 68.9 86 60.5
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 2.3e-10 68.9 89 57.3
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 3.9e-10 68.2 64 54.7
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 5.1e-10 67.8 90 58.9
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 5.1e-10 67.8 85 64.7
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 6.7e-10 67.4 56 53.6
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 8.8e-10 67.0 52 55.8
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 8.8e-10 67.0 56 57.1
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 1.1e-09 66.6 58 50.0
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 1.5e-09 66.2 90 56.7
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 1.5e-09 66.2 89 55.1
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 2.5e-09 65.5 85 62.4
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 3.3e-09 65.1 82 61.0
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 1.7e-08 62.8 57 56.1
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 2.2e-08 62.4 58 53.4
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 2.8e-08 62.0 56 53.6
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 1.1e-07 60.1 56 51.8
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 4.1e-07 58.2 84 56.0
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 4.1e-07 58.2 84 56.0
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 4.1e-07 58.2 84 56.0
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 4.1e-07 58.2 84 56.0
Dinv25473 Davidia involucrata HOM05D007581 ORTHO05D009250 5.3e-07 57.8 59 52.5
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 1.2e-06 56.6 57 43.9
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 7.7e-06 53.9 80 56.2


User provided reference genes

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