Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 1.2e-135 486.5 252 100.0
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 1.2e-77 293.9 233 69.5
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 5.9e-77 291.6 248 64.9
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 5.9e-77 291.6 259 65.3
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 7.2e-75 284.6 252 65.9
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 2.7e-74 282.7 255 64.3
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 2.3e-73 279.6 252 64.3
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 6.3e-71 271.6 251 61.0
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.4e-70 270.4 254 62.6
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.2e-69 267.3 254 62.2
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 2.6e-69 266.2 259 63.3
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 4.5e-69 265.4 254 62.2
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.7e-68 263.5 257 59.5
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 1.7e-68 263.5 256 60.9
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 2.2e-68 263.1 250 60.4
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.2e-68 263.1 257 59.1
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 2.2e-68 263.1 248 61.3
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 8.5e-68 261.2 257 58.8
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 8.5e-68 261.2 257 59.1
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 1.9e-67 260.0 250 59.2
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 5.5e-67 258.5 248 59.3
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 7.2e-67 258.1 229 61.1
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 7.2e-67 258.1 253 58.5
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 9.4e-67 257.7 227 63.9
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 1.6e-66 256.9 251 62.9
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.8e-65 253.4 247 61.5
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.0e-65 252.7 239 61.1
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 3.0e-65 252.7 244 59.4
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.0e-64 250.0 231 61.9
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 4.4e-64 248.8 249 57.0
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 4.4e-64 248.8 243 62.6
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 5.7e-64 248.4 231 59.7
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 7.4e-64 248.1 247 58.3
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.7e-63 246.9 220 62.7
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 1.4e-62 243.8 245 57.6
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 1.8e-62 243.4 245 58.8
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.8e-62 243.4 235 57.9
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 2.4e-62 243.0 228 58.8
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 4.1e-62 242.3 247 55.9
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 7.0e-62 241.5 251 56.2
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 1.5e-61 240.4 254 55.5
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.5e-61 240.4 258 58.5
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 2.6e-61 239.6 247 56.7
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 2.6e-61 239.6 247 56.3
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 3.5e-61 239.2 258 58.9
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 4.5e-61 238.8 247 55.9
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 5.9e-61 238.4 227 61.2
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 7.7e-61 238.0 253 53.4
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 7.7e-61 238.0 247 57.1
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 2.2e-60 236.5 246 56.1
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 2.9e-60 236.1 247 55.5
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 3.8e-60 235.7 246 55.7
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 5.0e-60 235.3 260 56.2
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.1e-59 234.2 244 55.3
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.4e-59 233.8 254 54.3
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 4.2e-59 232.3 252 53.2
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 4.2e-59 232.3 252 53.6
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 9.4e-59 231.1 231 58.0
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 2.1e-58 229.9 241 54.8
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 2.7e-58 229.6 256 55.5
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 2.7e-58 229.6 256 54.7
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 4.7e-58 228.8 229 56.8
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 8.0e-58 228.0 236 57.6
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.4e-57 227.3 244 52.5
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.8e-57 226.9 242 53.3
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 3.0e-57 226.1 254 53.5
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 3.9e-57 225.7 255 51.4
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 3.9e-57 225.7 224 60.7
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 3.9e-57 225.7 247 55.5
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 5.2e-57 225.3 242 52.9
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 5.2e-57 225.3 246 52.8
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 6.7e-57 224.9 233 54.5
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 1.1e-56 224.2 234 56.8
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 1.5e-56 223.8 250 54.4
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 1.7e-55 220.3 248 54.0
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.7e-55 220.3 229 53.3
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 2.8e-55 219.5 238 53.4
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 3.7e-55 219.2 246 54.1
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.7e-55 219.2 220 51.8
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 3.7e-55 219.2 239 50.2
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 4.8e-55 218.8 248 54.0
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 4.8e-55 218.8 248 54.0
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 8.2e-55 218.0 253 50.2
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 2.4e-54 216.5 241 49.8
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 7.0e-54 214.9 253 53.8
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.6e-53 213.0 223 54.3
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 3.5e-53 212.6 249 51.0
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 4.5e-53 212.2 226 56.6
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 5.0e-52 208.8 208 54.8
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 5.5e-51 205.3 250 51.6
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 1.2e-50 204.1 257 48.6
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 1.2e-50 204.1 257 48.6
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 2.1e-50 203.4 254 50.8
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 3.6e-50 202.6 249 53.0
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 3.6e-50 202.6 224 54.5
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 4.7e-50 202.2 241 51.0
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 4.7e-50 202.2 229 50.2
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 1.0e-49 201.1 222 55.9
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 1.2e-48 197.6 252 49.2
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 1.5e-48 197.2 204 52.9
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.4e-48 196.1 236 51.7
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 7.5e-48 194.9 258 45.7
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 9.7e-48 194.5 185 58.4
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 3.7e-47 192.6 173 60.7
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 6.3e-47 191.8 202 53.0
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 1.1e-46 191.0 231 49.8
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 3.1e-46 189.5 173 60.1
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 2.0e-45 186.8 244 50.0
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 2.7e-45 186.4 212 54.7
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 3.5e-45 186.0 296 43.2
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 1.7e-44 183.7 173 57.2
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 2.9e-44 183.0 173 57.2
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 2.9e-44 183.0 173 57.2
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 2.5e-43 179.9 271 45.4
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 4.2e-43 179.1 207 52.7
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.2e-42 177.6 251 43.4
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 1.4e-38 164.1 302 41.1
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 2.3e-36 156.8 234 43.6
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 5.0e-36 155.6 172 52.9
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 6.6e-36 155.2 221 45.2
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 4.1e-30 136.0 229 45.4
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 2.0e-29 133.7 137 59.1
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 3.3e-27 126.3 212 43.4
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 1.7e-23 114.0 239 35.6
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 4.6e-21 105.9 164 45.1
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 1.6e-18 97.4 89 60.7
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.4e-14 83.6 167 37.1
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 7.8e-13 78.6 123 42.3
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 7.6e-08 62.0 108 33.3


User provided reference genes

Program Settings