Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.205 Carica papaya HOM05D005242 ORTHO05D006778 2.4e-140 502.7 355 100.0
COL.COLO4_08566 Corchorus olitorius HOM05D005242 ORTHO05D006778 5.6e-41 172.6 144 62.5
Duzib041G0461 Durio zibethinus HOM05D005242 ORTHO05D006778 5.6e-41 172.6 144 64.6
Aa31LG4G6850 Aethionema arabicum HOM05D005242 ORTHO05D006778 3.6e-40 169.9 197 51.8
Atru.chr13.2099 Acer truncatum HOM05D005242 ORTHO05D006778 1.3e-37 161.4 216 48.6
CARHR070310 Cardamine hirsuta HOM05D005242 ORTHO05D006778 1.3e-37 161.4 145 57.2
Gorai.009G254600 Gossypium raimondii HOM05D005242 ORTHO05D006778 2.2e-37 160.6 143 59.4
Gohir.A05G243801 Gossypium hirsutum HOM05D005242 ORTHO05D006778 2.9e-37 160.2 145 58.6
THA.LOC104813717 Tarenaya hassleriana HOM05D005242 ORTHO05D006778 4.9e-37 159.5 163 54.6
Thecc.08G153500 Theobroma cacao HOM05D005242 ORTHO05D006778 8.3e-37 158.7 140 60.7
Carub.0002s2368 Capsella rubella HOM05D005242 ORTHO05D006778 2.4e-36 157.1 158 53.2
AT1G76770 Arabidopsis thaliana HOM05D005242 ORTHO05D006778 3.2e-36 156.8 140 57.1
Haze_17757 Corylus avellana HOM05D005242 ORTHO05D006778 2.7e-35 153.7 196 46.4
Potri.005G192700 Populus trichocarpa HOM05D005242 ORTHO05D006778 3.5e-35 153.3 199 49.2
BraA02t07119Z Brassica rapa HOM05D005242 ORTHO05D006778 4.6e-35 152.9 144 52.8
AT1G76780 Arabidopsis thaliana HOM05D005242 ORTHO05D006778 6.0e-35 152.5 139 55.4
AL2G36920 Arabidopsis lyrata HOM05D005242 ORTHO05D006778 1.0e-34 151.8 158 53.2
Sabra05G0147300 Salix brachista HOM05D005242 ORTHO05D006778 2.3e-34 150.6 219 47.5
A02p20890 Brassica napus HOM05D005242 ORTHO05D018625 3.9e-34 149.8 160 51.2
A02p20880 Brassica napus HOM05D005242 ORTHO05D006778 5.1e-34 149.4 144 51.4
Cfa018319 Carpinus fangiana HOM05D005242 ORTHO05D006778 5.1e-34 149.4 190 46.3
BcaC03g15701 Brassica carinata HOM05D005242 ORTHO05D006778 1.5e-33 147.9 144 51.4
Potri.002G067700 Populus trichocarpa HOM05D005242 ORTHO05D006778 1.5e-33 147.9 205 46.3
BcaB05g25009 Brassica carinata HOM05D005242 ORTHO05D006778 2.5e-33 147.1 135 54.8
THA.LOC104812037 Tarenaya hassleriana HOM05D005242 ORTHO05D006778 3.3e-33 146.7 147 53.1
BraA02t07120Z Brassica rapa HOM05D005242 ORTHO05D018625 5.6e-33 146.0 216 42.6
C02p32790 Brassica napus HOM05D005242 ORTHO05D006778 7.3e-33 145.6 144 50.7
BolC2t09420H Brassica oleracea HOM05D005242 ORTHO05D018625 9.6e-33 145.2 152 48.7
QL02p039039 Quercus lobata HOM05D005242 ORTHO05D006778 9.6e-33 145.2 202 45.0
Ciclev10003945m.g Citrus clementina HOM05D005242 ORTHO05D006778 1.6e-32 144.4 221 46.2
TPR.G31185 Trifolium pratense HOM05D004559 ORTHO05D005283 1.1e-31 141.7 198 43.9
Psat1g101840 Pisum sativum HOM05D005242 ORTHO05D006778 2.4e-31 140.6 191 44.0
BraA07t31767Z Brassica rapa HOM05D005242 ORTHO05D006778 8.9e-31 138.7 141 50.4
Aa31LG4G6840 Aethionema arabicum HOM05D005242 ORTHO05D006778 1.2e-30 138.3 133 51.9
A07p42410 Brassica napus HOM05D005242 ORTHO05D006778 1.2e-30 138.3 140 50.7
Prupe.8G031300 Prunus persica HOM05D005242 ORTHO05D006778 2.6e-30 137.1 204 44.6
CiPaw.16G012200 Carya illinoinensis HOM05D005242 ORTHO05D006778 4.4e-30 136.3 217 41.9
Eucgr.F02701 Eucalyptus grandis HOM05D005242 ORTHO05D006778 4.4e-30 136.3 145 52.4
MD10G1026100 Malus domestica HOM05D005242 ORTHO05D006778 4.4e-30 136.3 225 42.2
VMungo0464G2160 Vigna mungo HOM05D005242 ORTHO05D006778 7.6e-30 135.6 200 43.5
arahy.Tifrunner.gnm1.ann1.661UAU Arachis hypogaea HOM05D005242 ORTHO05D006778 9.9e-30 135.2 211 40.3
Manes.02G179900 Manihot esculenta HOM05D005242 ORTHO05D006778 9.9e-30 135.2 195 47.2
MD05G1026800 Malus domestica HOM05D005242 ORTHO05D006778 2.9e-29 133.7 206 44.2
arahy.Tifrunner.gnm1.ann1.3DXP20 Arachis hypogaea HOM05D005242 ORTHO05D006778 3.8e-29 133.3 218 38.5
C06p50980 Brassica napus HOM05D005242 ORTHO05D006778 4.9e-29 132.9 135 49.6
Nn5g28757 Nelumbo nucifera HOM05D005242 ORTHO05D006778 4.9e-29 132.9 197 46.2
Rhsim11G0083400 Rhododendron simsii HOM05D005242 ORTHO05D006778 4.9e-29 132.9 194 43.8
CSS0002508 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 6.4e-29 132.5 136 50.7
CSS0020035 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 6.4e-29 132.5 136 50.7
BolC6t40122H Brassica oleracea HOM05D005242 ORTHO05D006778 8.4e-29 132.1 138 48.6
CANSAT25G1562 Cannabis sativa HOM05D005242 ORTHO05D006778 3.2e-28 130.2 377 33.4
Lj2g0024086 Lotus japonicus HOM05D005242 ORTHO05D006778 5.4e-28 129.4 198 39.4
Medtr1246s0010 Medicago truncatula HOM05D005242 ORTHO05D006778 9.3e-28 128.6 143 44.8
Glyma.16G166700 Glycine max HOM05D005242 ORTHO05D006778 2.7e-27 127.1 211 38.4
FAN24G0150 Fragaria x ananassa HOM05D005242 ORTHO05D006778 3.5e-27 126.7 199 41.2
Lalb_Chr19g0130231 Lupinus albus HOM05D005242 ORTHO05D006778 4.6e-27 126.3 178 42.7
Glyma.02G081300 Glycine max HOM05D005242 ORTHO05D006778 7.8e-27 125.6 212 38.7
PGR042G2442 Punica granatum HOM05D005242 ORTHO05D006778 7.8e-27 125.6 375 31.2
RcHm_v2.0_Chr6g0275301 Rosa chinensis HOM05D005242 ORTHO05D006778 7.8e-27 125.6 383 34.2
Oeu011949.1 Olea europaea HOM05D005242 ORTHO05D006778 1.7e-26 124.4 202 42.1
FAN27G0674 Fragaria x ananassa HOM05D005242 ORTHO05D006778 2.3e-26 124.0 199 40.7
TWI60G0101 Tripterygium wilfordii HOM05D005242 ORTHO05D006778 5.1e-26 122.9 194 41.8
vmacro01456 Vaccinium macrocarpon HOM05D005242 ORTHO05D006778 1.5e-25 121.3 196 40.3
FAN20G3127 Fragaria x ananassa HOM05D005242 ORTHO05D006778 1.9e-25 120.9 392 30.1
Actinidia29532 Actinidia chinensis HOM05D005242 ORTHO05D006778 2.5e-25 120.6 211 40.3
SalBow6G1825 Salvia bowleyana HOM05D005242 ORTHO05D006778 2.5e-25 120.6 205 41.0
arahy.Tifrunner.gnm1.ann1.BM3N3L Arachis hypogaea HOM05D005242 ORTHO05D006778 3.3e-25 120.2 144 47.2
arahy.Tifrunner.gnm1.ann1.H39N2I Arachis hypogaea HOM05D005242 ORTHO05D006778 3.3e-25 120.2 144 47.2
PSO210G0022 Papaver somniferum HOM05D005242 ORTHO05D006778 3.3e-25 120.2 190 38.4
Aqoxy5G02077 Aquilegia oxysepala HOM05D005242 ORTHO05D006778 5.6e-25 119.4 200 40.5
Lalb_Chr21g0305491 Lupinus albus HOM05D005242 ORTHO05D006778 7.3e-25 119.0 161 47.2
FAN15G2695 Fragaria x ananassa HOM05D005242 ORTHO05D006778 1.3e-24 118.2 394 29.7
PSO447G0326 Papaver somniferum HOM05D005242 ORTHO05D006778 4.8e-24 116.3 191 38.2
Psat6g192600 Pisum sativum HOM05D005242 ORTHO05D006778 6.2e-24 115.9 145 47.6
BcaC03g15702 Brassica carinata HOM05D005242 ORTHO05D018625 1.4e-23 114.8 140 44.3
Ca_27679_v3 Cicer arietinum L. HOM05D005242 ORTHO05D006778 1.4e-23 114.8 170 41.8
Cc10_g14420 Coffea canephora HOM05D005242 ORTHO05D006778 1.8e-23 114.4 193 38.9
Dinv25870 Davidia involucrata HOM05D005242 ORTHO05D006778 1.8e-23 114.4 226 40.7
Medtr1g098690 Medicago truncatula HOM05D005242 ORTHO05D006778 1.8e-23 114.4 165 44.8
GSVIVG01034538001 Vitis vinifera HOM05D005242 ORTHO05D006778 1.8e-23 114.4 382 28.0
Lj5g0003985 Lotus japonicus HOM05D005242 ORTHO05D006778 3.1e-23 113.6 170 43.5
AUR62013591 Chenopodium quinoa HOM05D005242 ORTHO05D006778 1.2e-22 111.7 203 39.4
SGA_v2.0_scaffold19G08682 Striga asiatica HOM05D001302 ORTHO05D001107 1.2e-22 111.7 150 42.0
Peaxi162Scf00599g00049 Petunia axillaris HOM05D005242 ORTHO05D006778 1.5e-22 111.3 381 27.3
AUR62026703 Chenopodium quinoa HOM05D005242 ORTHO05D006778 4.4e-22 109.8 214 39.3
Solyc04g071490.3 Solanum lycopersicum HOM05D005242 ORTHO05D006778 4.4e-22 109.8 146 43.2
Sopen04g027460 Solanum pennellii HOM05D005242 ORTHO05D006778 4.4e-22 109.8 146 43.2
CAN.G268.26 Capsicum annuum HOM05D005242 ORTHO05D006778 9.9e-22 108.6 199 36.7
DCAR_001139 Daucus carota HOM05D005242 ORTHO05D006778 2.9e-21 107.1 212 36.8
Nitab4.5_0010749g0010 Nicotiana tabacum HOM05D005242 ORTHO05D006778 2.9e-21 107.1 192 37.0
Peaxi162Scf01294g00121 Petunia axillaris HOM05D005242 ORTHO05D006778 2.9e-21 107.1 208 35.6
Sc26g0002570 Simmondsia chinensis HOM05D005242 ORTHO05D006778 2.9e-21 107.1 191 41.4
VMungo0720G2917 Vigna mungo HOM05D005242 ORTHO05D006778 2.9e-21 107.1 164 43.3
ATR0820G162 Amborella trichopoda HOM05D005242 ORTHO05D006778 8.4e-21 105.5 144 46.5
Glyma.10G224400 Glycine max HOM05D005242 ORTHO05D006778 1.4e-20 104.8 176 43.2
Hund17437 Selenicereus undatus HOM05D005242 ORTHO05D006778 1.9e-20 104.4 133 42.9
EL10Ac1g01555 Beta vulgaris HOM05D005242 ORTHO05D006778 3.2e-20 103.6 212 39.2
Nitab4.5_0001062g0060 Nicotiana tabacum HOM05D005242 ORTHO05D006778 4.2e-20 103.2 374 28.6
Phvul.007G080300 Phaseolus vulgaris HOM05D005242 ORTHO05D006778 4.2e-20 103.2 193 36.8
CiPaw.15G015900 Carya illinoinensis HOM05D005242 ORTHO05D006778 5.4e-20 102.8 213 36.6
CSS0021128 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 7.1e-20 102.4 143 42.0
CDE02G4447 Ceratophyllum demersum HOM05D005242 ORTHO05D006778 7.1e-20 102.4 198 34.3
PGSC0003DMG400024099 Solanum tuberosum HOM05D005242 ORTHO05D006778 9.3e-20 102.1 376 30.3
DCAR_014441 Daucus carota HOM05D005242 ORTHO05D006778 6.0e-19 99.4 199 33.7
Glyma.20G167400 Glycine max HOM05D005242 ORTHO05D006778 3.0e-18 97.1 176 42.6
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.5e-17 94.0 99 53.5
Actinidia17789 Actinidia chinensis HOM05D005242 ORTHO05D006778 3.3e-17 93.6 192 34.9
CDE08G0940 Ceratophyllum demersum HOM05D005242 ORTHO05D006778 9.6e-17 92.0 155 38.7
FvH4_2g13660 Fragaria vesca HOM05D005242 ORTHO05D006778 9.6e-17 92.0 342 27.8
Nitab4.5_0002487g0010 Nicotiana tabacum HOM05D001302 ORTHO05D001107 9.6e-17 92.0 102 47.1
Sc02g0004040 Simmondsia chinensis HOM05D005242 ORTHO05D006778 9.6e-17 92.0 202 35.6
Carub.0002s2369 Capsella rubella HOM05D005242 ORTHO05D018625 1.3e-16 91.7 89 53.9
Sp5g31920 Schrenkiella parvula HOM05D005242 ORTHO05D006778 2.1e-16 90.9 68 64.7
BcaC03g15700 Brassica carinata HOM05D005242 ORTHO05D006778 2.8e-16 90.5 105 44.8
unitig_52.g17530 Utricularia gibba HOM05D005242 ORTHO05D006778 8.1e-16 89.0 153 36.6
Migut.N03213 Erythranthe guttata HOM05D005242 ORTHO05D006778 1.4e-15 88.2 143 42.7
CAN.G18.12 Capsicum annuum HOM05D005242 ORTHO05D006778 1.2e-14 85.1 225 32.4
Lsat_1_v5_gn_6_100581 Lactuca sativa HOM05D005242 ORTHO05D006778 2.0e-14 84.3 156 33.3
HanXRQChr05g0161961 Helianthus annuus HOM05D005242 ORTHO05D006778 4.9e-13 79.7 150 31.3
TWI60G1058 Tripterygium wilfordii HOM05D005242 ORTHO05D006778 1.1e-12 78.6 123 44.7
Sed0006497 Sechium edule HOM05D005242 ORTHO05D006778 1.4e-12 78.2 144 37.5
Lsat_1_v5_gn_9_40940 Lactuca sativa HOM05D005242 ORTHO05D006778 1.9e-12 77.8 145 35.2
Nitab4.5_0004505g0020 Nicotiana tabacum HOM05D005242 ORTHO05D006778 4.2e-12 76.6 148 36.5
PGSC0003DMG402010796 Solanum tuberosum HOM05D005242 ORTHO05D006778 1.6e-11 74.7 130 34.6
ClCG09G010170 Citrullus lanatus HOM05D005242 ORTHO05D006778 6.0e-11 72.8 201 33.3
Phvul.004G094700 Phaseolus vulgaris HOM05D005242 ORTHO05D006778 1.8e-10 71.2 135 37.8
Sopen12g029170 Solanum pennellii HOM05D005242 ORTHO05D006778 2.8e-08 63.9 202 25.2
SEGI_03948 Sequoiadendron giganteum HOM05D005242 ORTHO05D000080 4.8e-08 63.2 78 42.3
Solyc12g056560.2 Solanum lycopersicum HOM05D005242 ORTHO05D006778 8.1e-08 62.4 208 25.5
GSVIVG01034537001 Vitis vinifera HOM05D005242 ORTHO05D006778 5.8e-06 56.2 336 24.1


User provided reference genes

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