Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.190 Carica papaya HOM05D004716 ORTHO05D005646 4.4e-272 940.6 465 100.0
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 1.3e-199 699.9 457 76.8
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 1.7e-199 699.5 457 76.8
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 4.2e-198 694.9 428 80.4
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 4.0e-196 688.3 429 79.7
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 8.8e-196 687.2 429 81.1
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 5.7e-195 684.5 429 80.7
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 1.4e-193 679.9 429 79.7
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 1.8e-193 679.5 429 79.3
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 2.4e-193 679.1 429 79.3
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 4.1e-193 678.3 426 79.1
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 7.0e-193 677.6 462 75.5
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 2.7e-192 675.6 458 74.2
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 1.0e-191 673.7 429 79.3
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 1.3e-191 673.3 431 78.7
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 1.3e-191 673.3 431 78.7
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 2.3e-191 672.5 430 79.5
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 2.9e-191 672.2 429 78.6
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 6.6e-191 671.0 461 75.3
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 1.5e-190 669.8 430 79.1
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 3.3e-190 668.7 430 78.8
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 5.5e-190 667.9 457 75.3
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.2e-189 666.8 460 74.3
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 2.1e-189 666.0 429 77.9
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 6.1e-189 664.5 431 77.7
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 1.4e-188 663.3 440 75.7
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 4.0e-188 661.8 452 75.0
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 4.0e-188 661.8 429 78.3
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 8.9e-188 660.6 440 74.8
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 2.0e-187 659.4 454 75.3
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 5.7e-187 657.9 467 72.6
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 1.3e-186 656.8 431 77.7
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 1.7e-186 656.4 431 77.5
Sed0004003 Sechium edule HOM05D004716 ORTHO05D005646 1.7e-186 656.4 440 76.4
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 1.7e-186 656.4 440 76.4
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 2.9e-186 655.6 457 74.0
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 8.3e-186 654.1 431 77.0
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 1.8e-185 652.9 429 77.4
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 5.4e-185 651.4 457 74.2
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 1.2e-184 650.2 457 74.0
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 4.6e-184 648.3 431 76.1
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 5.9e-184 647.9 431 75.9
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 2.9e-183 645.6 431 75.9
Ca_25988_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 5.0e-183 644.8 424 75.2
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 1.5e-182 643.3 431 75.6
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 1.2e-181 640.2 431 75.4
CSS0049856 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 1.4e-180 636.7 431 74.7
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 1.4e-180 636.7 465 69.9
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 2.3e-180 636.0 431 75.4
TPR.G36694 Trifolium pratense HOM05D004716 ORTHO05D005646 4.0e-180 635.2 444 72.5
Nn1g06102 Nelumbo nucifera HOM05D004716 ORTHO05D005646 2.0e-179 632.9 438 75.3
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 2.6e-179 632.5 458 71.2
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 4.4e-179 631.7 430 74.9
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 5.8e-179 631.3 458 71.0
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 2.2e-178 629.4 458 70.7
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 4.9e-178 628.2 440 73.6
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 6.4e-178 627.9 458 70.7
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 6.4e-178 627.9 458 71.0
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 8.3e-178 627.5 430 75.3
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 1.4e-177 626.7 440 72.3
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 1.9e-177 626.3 435 74.0
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 5.4e-177 624.8 430 75.1
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 1.6e-176 623.2 429 73.2
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 2.0e-176 622.9 429 74.1
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 4.6e-176 621.7 454 72.0
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 6.0e-176 621.3 432 74.1
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 1.1e-174 617.1 431 72.9
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 1.1e-174 617.1 432 73.6
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 2.5e-174 615.9 431 72.2
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 8.9e-172 607.4 435 70.3
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 1.2e-171 607.1 431 72.4
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 1.5e-171 606.7 430 70.2
AUR62026717 Chenopodium quinoa HOM05D004716 ORTHO05D005646 1.5e-171 606.7 430 70.5
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 1.5e-171 606.7 432 70.8
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 3.4e-171 605.5 435 70.3
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 7.5e-171 604.4 435 71.0
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 2.2e-170 602.8 431 70.5
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 2.7e-168 595.9 431 69.6
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 6.0e-168 594.7 430 70.2
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 6.0e-168 594.7 432 69.9
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 1.3e-167 593.6 432 69.9
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 3.9e-167 592.0 431 71.0
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 1.5e-166 590.1 429 70.6
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 1.9e-166 589.7 430 69.5
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 3.3e-166 589.0 431 68.9
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 5.6e-166 588.2 430 72.6
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 2.1e-165 586.3 441 68.3
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 2.1e-165 586.3 459 67.3
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 2.1e-165 586.3 431 70.3
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 2.8e-165 585.9 431 68.7
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 3.1e-164 582.4 432 69.7
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 8.9e-164 580.9 430 71.4
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 1.5e-163 580.1 391 74.2
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 2.0e-163 579.7 432 68.8
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 2.6e-163 579.3 433 69.1
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 4.4e-163 578.6 432 68.8
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 9.9e-163 577.4 432 67.8
ATR0772G093 Amborella trichopoda HOM05D004716 ORTHO05D005646 1.3e-162 577.0 430 68.1
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 1.3e-162 577.0 429 69.5
Sc02g0004170 Simmondsia chinensis HOM05D004716 ORTHO05D005646 1.4e-161 573.5 429 68.5
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 2.4e-161 572.8 429 69.2
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 1.2e-160 570.5 432 67.8
Oeu014493.1 Olea europaea HOM05D004716 ORTHO05D005646 2.1e-160 569.7 391 73.1
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 3.5e-160 568.9 432 67.8
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 3.5e-160 568.9 432 67.8
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 3.5e-160 568.9 432 67.6
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 3.5e-160 568.9 432 68.1
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 1.2e-157 560.5 432 66.7
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 2.8e-157 559.3 443 64.6
Psat6g193200 Pisum sativum HOM05D004716 ORTHO05D005646 1.5e-155 553.5 342 80.1
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 3.8e-154 548.9 429 65.3
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 1.9e-153 546.6 432 66.0
Psat6g193040 Pisum sativum HOM05D004716 ORTHO05D005646 2.7e-152 542.7 299 86.3
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 3.0e-151 539.3 434 63.8
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 1.2e-147 527.3 470 60.2
Zm00001eb422340 Zea mays HOM05D004716 ORTHO05D005646 4.4e-147 525.4 433 64.2
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 5.8e-147 525.0 432 64.1
vmacro21155 Vaccinium macrocarpon HOM05D004716 ORTHO05D005646 6.0e-144 515.0 306 81.4
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 1.3e-141 507.3 434 62.7
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 7.6e-139 498.0 342 73.1
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 3.0e-135 486.1 305 77.0
Zm00001eb422260 Zea mays HOM05D004716 ORTHO05D005646 6.7e-127 458.4 343 67.6
Os04g0421800 Oryza sativa ssp. japonica HOM05D004716 ORTHO05D005646 4.3e-126 455.7 303 73.3
Mapoly0014s0164 Marchantia polymorpha HOM05D004716 ORTHO05D005646 4.1e-124 449.1 434 54.6
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 2.0e-123 446.8 431 55.0
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 2.5e-121 439.9 347 65.1
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 3.9e-119 432.6 442 55.0
Pp3c5_6660 Physcomitrium patens HOM05D004716 ORTHO05D005646 9.0e-116 421.4 437 51.5
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis HOM05D004716 ORTHO05D005646 5.9e-115 418.7 450 50.9
Pp3c6_18530 Physcomitrium patens HOM05D004716 ORTHO05D005646 3.8e-114 416.0 430 50.7
HanXRQChr10g0277841 Helianthus annuus HOM05D004716 ORTHO05D005646 5.1e-111 405.6 324 67.0
Zm00001eb422280 Zea mays HOM05D004716 ORTHO05D005646 8.8e-103 378.3 260 70.8
Zm00001eb422320 Zea mays HOM05D004716 ORTHO05D005646 8.8e-103 378.3 260 70.8
CBR_g11170 Chara braunii HOM05D004716 ORTHO05D005646 1.7e-98 364.0 472 45.6
Actinidia10653 Actinidia chinensis HOM05D004716 ORTHO05D005646 5.4e-68 262.7 251 58.6
PRCOL_00002924 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 6.8e-55 219.2 365 36.7
CAN.G309.90 Capsicum annuum HOM05D004716 ORTHO05D005646 4.8e-32 143.3 178 48.3
Actinidia13988 Actinidia chinensis HOM05D004716 ORTHO05D005646 9.3e-28 129.0 87 71.3
TAR636G3535 Trochodendron aralioides HOM05D004716 ORTHO05D005646 6.9e-23 112.8 92 68.5
Cre06.g286600 Chlamydomonas reinhardtii HOM05D004716 ORTHO05D005646 1.1e-20 105.5 109 48.6
PRCOL_00004133 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 1.6e-16 91.7 256 32.0


User provided reference genes

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