Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 2.3e-100 369.0 199 100.0
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 2.7e-69 265.8 183 72.7
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 5.1e-68 261.5 210 67.1
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 6.7e-68 261.2 208 67.3
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 2.5e-67 259.2 177 72.9
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 4.8e-66 255.0 174 73.6
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 8.2e-66 254.2 211 63.5
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 1.1e-65 253.8 177 71.2
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 1.8e-65 253.1 205 64.4
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 3.1e-65 252.3 211 64.9
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 5.3e-65 251.5 181 69.6
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 6.9e-65 251.1 177 71.8
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 9.1e-65 250.8 202 66.3
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 9.1e-65 250.8 176 73.3
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 1.2e-64 250.4 184 66.8
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 4.5e-64 248.4 180 68.9
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 5.9e-64 248.1 174 70.7
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 7.7e-64 247.7 174 70.7
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 1.0e-63 247.3 183 68.3
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 3.8e-63 245.4 170 69.4
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 5.0e-63 245.0 171 69.0
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 5.0e-63 245.0 174 71.3
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 5.0e-63 245.0 208 63.9
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 6.5e-63 244.6 203 61.1
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 1.1e-62 243.8 176 71.0
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 1.4e-62 243.4 176 71.0
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 2.5e-62 242.7 199 63.8
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 3.2e-62 242.3 235 57.4
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.2e-62 242.3 173 70.5
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 3.2e-62 242.3 172 69.2
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 4.2e-62 241.9 169 71.0
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 4.2e-62 241.9 176 70.5
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 4.2e-62 241.9 209 59.3
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 9.4e-62 240.7 177 67.8
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 1.2e-61 240.4 170 68.2
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 1.6e-61 240.0 172 69.2
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 6.1e-61 238.0 208 59.1
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 7.9e-61 237.7 175 69.1
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 1.0e-60 237.3 182 65.4
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 1.4e-60 236.9 168 69.6
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 1.8e-60 236.5 171 67.3
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 3.9e-60 235.3 190 62.1
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 8.8e-60 234.2 198 63.1
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 2.0e-59 233.0 203 61.1
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 2.0e-59 233.0 180 63.9
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 1.3e-58 230.3 170 67.1
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 2.2e-58 229.6 174 66.7
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 2.8e-58 229.2 161 70.8
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 8.2e-58 227.6 180 63.3
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 1.1e-57 227.3 231 54.1
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 1.8e-57 226.5 169 64.5
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 2.4e-57 226.1 180 64.4
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 5.3e-57 224.9 174 64.4
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 9.1e-57 224.2 207 58.0
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 9.1e-57 224.2 212 57.1
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 1.5e-56 223.4 169 65.7
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 4.5e-56 221.9 210 56.2
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 7.7e-56 221.1 181 59.1
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 1.3e-55 220.3 184 60.9
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 1.7e-55 219.9 176 61.4
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 2.2e-55 219.5 182 61.0
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 2.2e-55 219.5 180 60.6
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 3.8e-55 218.8 181 58.6
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 5.0e-55 218.4 164 64.0
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 5.0e-55 218.4 181 58.6
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 8.5e-55 217.6 171 61.4
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 1.1e-54 217.2 182 60.4
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.9e-54 216.5 171 61.4
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 1.9e-54 216.5 181 57.5
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 4.2e-54 215.3 164 62.8
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 2.1e-53 213.0 164 64.6
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 4.7e-53 211.8 212 52.8
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 2.3e-52 209.5 161 63.4
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 2.3e-52 209.5 178 60.1
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 2.3e-52 209.5 179 60.9
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 3.9e-52 208.8 184 59.2
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 5.2e-52 208.4 182 57.7
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 6.7e-52 208.0 174 59.8
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 6.7e-52 208.0 212 54.2
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 2.6e-51 206.1 161 62.1
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 5.7e-51 204.9 151 63.6
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 4.8e-50 201.8 185 56.8
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 6.3e-50 201.4 164 61.0
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 6.3e-50 201.4 182 54.9
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 8.2e-50 201.1 164 60.4
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 1.1e-49 200.7 164 64.0
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 2.4e-49 199.5 164 61.0
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 3.1e-49 199.1 164 62.8
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 7.0e-49 198.0 164 64.0
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 7.0e-49 198.0 164 62.8
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 7.0e-49 198.0 164 62.8
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 7.0e-49 198.0 164 64.0
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 1.6e-48 196.8 165 60.6
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 3.5e-48 195.7 165 60.0
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 5.9e-48 194.9 164 58.5
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 7.7e-48 194.5 177 54.8
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 1.7e-47 193.4 152 63.2
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 1.1e-46 190.7 174 56.9
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 1.5e-46 190.3 168 57.7
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 5.5e-46 188.3 164 57.3
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 4.7e-45 185.3 164 57.9
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 1.4e-44 183.7 177 58.2
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 3.1e-41 172.6 184 49.5
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 1.2e-40 170.6 164 58.5
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 5.9e-40 168.3 158 52.5
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 1.8e-36 156.8 118 68.6
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 4.1e-33 145.6 90 75.6
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 7.0e-33 144.8 185 40.5
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 1.5e-30 137.1 89 73.0
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 5.5e-30 135.2 127 55.1
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 1.7e-18 97.1 178 35.4
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 2.2e-18 96.7 190 31.6
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 6.4e-18 95.1 176 33.5
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 6.4e-18 95.1 99 53.5
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 3.9e-15 85.9 120 43.3
Ca_19566_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 2.7e-08 63.2 39 71.8
SMO337G0092 Selaginella moellendorffii HOM05D006799 ORTHO05D008391 1.0e-07 61.2 172 27.9


User provided reference genes

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