Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.105 Carica papaya HOM05D001633 ORTHO05D031750 1.0e-42 176.4 92 100.0
THA.LOC104812587 Tarenaya hassleriana HOM05D001633 ORTHO05D002880 2.2e-13 79.0 60 70.0
Lj2g0023015 Lotus japonicus HOM05D001633 ORTHO05D002880 5.0e-10 67.8 52 61.5
Dinv39246 Davidia involucrata HOM05D001633 ORTHO05D002880 8.6e-10 67.0 77 55.8
ClCG08G016380 Citrullus lanatus HOM05D001633 ORTHO05D002880 1.5e-09 66.2 53 64.2
Gohir.A05G208200 Gossypium hirsutum HOM05D001633 ORTHO05D002880 1.5e-09 66.2 53 69.8
Gohir.D05G211700 Gossypium hirsutum HOM05D001633 ORTHO05D002880 1.5e-09 66.2 53 69.8
Gorai.009G218300 Gossypium raimondii HOM05D001633 ORTHO05D002880 1.5e-09 66.2 53 69.8
AT5G43140 Arabidopsis thaliana HOM05D001633 ORTHO05D002880 1.9e-09 65.9 73 52.1
MELO3C010815.2 Cucumis melo HOM05D001633 ORTHO05D002880 1.9e-09 65.9 57 64.9
Manes.18G044700 Manihot esculenta HOM05D001633 ORTHO05D002880 2.5e-09 65.5 74 51.4
TWI12G0996 Tripterygium wilfordii HOM05D001633 ORTHO05D002880 2.5e-09 65.5 52 63.5
Thhalv10003259m.g Eutrema salsugineum HOM05D001633 ORTHO05D002880 3.3e-09 65.1 73 56.2
Aa31LG9G13230 Aethionema arabicum HOM05D001633 ORTHO05D002880 4.3e-09 64.7 73 54.8
GSVIVG01009364001 Vitis vinifera HOM05D001633 ORTHO05D002880 4.3e-09 64.7 73 56.2
Duzib116G0780 Durio zibethinus HOM05D001633 ORTHO05D002880 7.3e-09 63.9 50 62.0
BcaNung04332 Brassica carinata HOM05D001633 ORTHO05D002880 9.5e-09 63.5 73 50.7
BraA03t15294Z Brassica rapa HOM05D001633 ORTHO05D002880 9.5e-09 63.5 65 56.9
CARHR241990 Cardamine hirsuta HOM05D001633 ORTHO05D002880 9.5e-09 63.5 74 50.0
AL7G17530 Arabidopsis lyrata HOM05D001633 ORTHO05D002880 1.2e-08 63.2 80 48.8
AT2G14860 Arabidopsis thaliana HOM05D001633 ORTHO05D002880 1.2e-08 63.2 90 46.7
Thecc.08G091200 Theobroma cacao HOM05D001633 ORTHO05D002880 1.2e-08 63.2 57 61.4
CsaV3_2G026230 Cucumis sativus L. HOM05D001633 ORTHO05D002880 1.6e-08 62.8 85 45.9
Sabra14G0011700 Salix brachista HOM05D001633 ORTHO05D002880 1.6e-08 62.8 70 52.9
BcaC06g34679 Brassica carinata HOM05D001633 ORTHO05D002880 2.1e-08 62.4 50 68.0
THA.LOC104807224 Tarenaya hassleriana HOM05D001633 ORTHO05D002880 2.8e-08 62.0 84 47.6
AL8G17520 Arabidopsis lyrata HOM05D001633 ORTHO05D002880 3.6e-08 61.6 73 52.1
BraA09t36705Z Brassica rapa HOM05D001633 ORTHO05D002880 3.6e-08 61.6 54 55.6
Medtr6g038540 Medicago truncatula HOM05D001633 ORTHO05D002880 4.7e-08 61.2 46 58.7
Carub.0008s0558 Capsella rubella HOM05D001633 ORTHO05D002880 6.1e-08 60.8 73 54.8
Psat1g101200 Pisum sativum HOM05D001633 ORTHO05D002880 6.1e-08 60.8 50 64.0
QL11p031864 Quercus lobata HOM05D001633 ORTHO05D002880 6.1e-08 60.8 53 62.3
Atru.chr13.810 Acer truncatum HOM05D001633 ORTHO05D002880 8.0e-08 60.5 74 50.0
A03p62380 Brassica napus HOM05D001633 ORTHO05D002880 8.0e-08 60.5 59 55.9
AUR62022506 Chenopodium quinoa HOM05D001633 ORTHO05D002880 8.0e-08 60.5 51 62.7
COL.COLO4_28528 Corchorus olitorius HOM05D001633 ORTHO05D002880 8.0e-08 60.5 57 61.4
A09p10630 Brassica napus HOM05D001633 ORTHO05D002880 1.0e-07 60.1 54 53.7
Sp7g31630 Schrenkiella parvula HOM05D001633 ORTHO05D002880 1.0e-07 60.1 73 49.3
BcaNung02910 Brassica carinata HOM05D001633 ORTHO05D002880 1.8e-07 59.3 73 47.9
C07p25700 Brassica napus HOM05D001633 ORTHO05D002880 1.8e-07 59.3 47 68.1
BolC7t43089H Brassica oleracea HOM05D001633 ORTHO05D002880 1.8e-07 59.3 47 68.1
A06p48020 Brassica napus HOM05D001633 ORTHO05D002880 2.3e-07 58.9 40 72.5
CARHR180800 Cardamine hirsuta HOM05D001633 ORTHO05D002880 2.3e-07 58.9 43 65.1
Lalb_Chr19g0129891 Lupinus albus HOM05D001633 ORTHO05D002880 2.3e-07 58.9 46 65.2
BcaC06g31720 Brassica carinata HOM05D001633 ORTHO05D002880 3.0e-07 58.5 40 72.5
Carub.0007s0654 Capsella rubella HOM05D001633 ORTHO05D002880 3.0e-07 58.5 71 50.7
PGR142G2115 Punica granatum HOM05D001633 ORTHO05D002880 3.0e-07 58.5 46 60.9
Rhsim07G0221600 Rhododendron simsii HOM05D001633 ORTHO05D002880 3.0e-07 58.5 79 48.1
Aa31LG8G12920 Aethionema arabicum HOM05D001633 ORTHO05D002880 4.0e-07 58.2 67 53.7
QL12p037626 Quercus lobata HOM05D001633 ORTHO05D002880 4.0e-07 58.2 53 62.3
C09p12610 Brassica napus HOM05D001633 ORTHO05D002880 5.2e-07 57.8 54 53.7
Thhalv10025993m.g Eutrema salsugineum HOM05D001633 ORTHO05D002880 5.2e-07 57.8 73 46.6
Sc15g0005570 Simmondsia chinensis HOM05D001633 ORTHO05D002880 6.8e-07 57.4 46 58.7
Sc15g0005750 Simmondsia chinensis HOM05D001633 ORTHO05D002880 6.8e-07 57.4 46 58.7
BraA06t27672Z Brassica rapa HOM05D001633 ORTHO05D002880 8.9e-07 57.0 48 64.6
Ciclev10002167m.g Citrus clementina HOM05D001633 ORTHO05D002880 8.9e-07 57.0 37 67.6
Cc02_g19630 Coffea canephora HOM05D001633 ORTHO05D002880 8.9e-07 57.0 53 54.7
Lj4C69T4 Lonicera japonica HOM05D001633 ORTHO05D002880 8.9e-07 57.0 46 60.9
Psat6g215720 Pisum sativum HOM05D001633 ORTHO05D002880 8.9e-07 57.0 62 50.0
TPR.G16201 Trifolium pratense HOM05D001633 ORTHO05D002880 8.9e-07 57.0 38 65.8
VMungo0464G0082 Vigna mungo HOM05D001633 ORTHO05D002880 8.9e-07 57.0 46 60.9
arahy.Tifrunner.gnm1.ann1.MX1GHC Arachis hypogaea HOM05D001633 ORTHO05D002880 1.2e-06 56.6 86 39.5
CARHR284870 Cardamine hirsuta HOM05D001633 ORTHO05D002880 1.2e-06 56.6 52 55.8
Actinidia08254 Actinidia chinensis HOM05D001633 ORTHO05D002880 1.5e-06 56.2 79 45.6
BcaB07g31802 Brassica carinata HOM05D001633 ORTHO05D002880 1.5e-06 56.2 47 59.6
BcaC03g16559 Brassica carinata HOM05D011290 ORTHO05D031750 1.5e-06 56.2 82 40.2
C02p43730 Brassica napus HOM05D011290 ORTHO05D031750 1.5e-06 56.2 82 40.2
BolC7t46443H Brassica oleracea HOM05D001633 ORTHO05D002880 1.5e-06 56.2 76 47.4
Eucgr.I01077 Eucalyptus grandis HOM05D001633 ORTHO05D002880 1.5e-06 56.2 54 51.9
Thhalv10022822m.g Eutrema salsugineum HOM05D001633 ORTHO05D002880 1.5e-06 56.2 79 44.3
Thecc.02G113900 Theobroma cacao HOM05D001633 ORTHO05D002880 1.5e-06 56.2 55 56.4
Ah.09g231990 Amaranthus hybridus HOM05D001633 ORTHO05D002880 2.0e-06 55.8 46 60.9
AT4G33905 Arabidopsis thaliana HOM05D001633 ORTHO05D002880 2.0e-06 55.8 71 49.3
Cc10_g05600 Coffea canephora HOM05D001633 ORTHO05D002880 2.0e-06 55.8 76 46.1
Nitab4.5_0014410g0010 Nicotiana tabacum HOM05D001633 ORTHO05D002880 2.0e-06 55.8 43 60.5
SalBow7G2613 Salvia bowleyana HOM05D001633 ORTHO05D002880 2.0e-06 55.8 67 50.7
Sp2g07920 Schrenkiella parvula HOM05D001633 ORTHO05D002880 2.0e-06 55.8 43 67.4
Sed0001701 Sechium edule HOM05D001633 ORTHO05D002880 2.0e-06 55.8 45 60.0
BcaC04g23059 Brassica carinata HOM05D001633 ORTHO05D002880 2.6e-06 55.5 74 45.9
CSS0034661 Camellia sinensis var. sinensis HOM05D001633 ORTHO05D002880 2.6e-06 55.5 74 41.9
CSS0035445 Camellia sinensis var. sinensis HOM05D001633 ORTHO05D002880 2.6e-06 55.5 74 41.9
CiPaw.05G015600 Carya illinoinensis HOM05D001633 ORTHO05D002880 2.6e-06 55.5 66 53.0
arahy.Tifrunner.gnm1.ann1.I6RXR7 Arachis hypogaea HOM05D001633 ORTHO05D002880 3.4e-06 55.1 46 54.3
BcaC06g36025 Brassica carinata HOM05D001633 ORTHO05D002880 3.4e-06 55.1 49 57.1
C07p08820 Brassica napus HOM05D001633 ORTHO05D002880 3.4e-06 55.1 49 57.1
C07p60010 Brassica napus HOM05D001633 ORTHO05D002880 3.4e-06 55.1 76 46.1
BolC7t41295H Brassica oleracea HOM05D001633 ORTHO05D002880 3.4e-06 55.1 49 57.1
Solyc01g107240.4 Solanum lycopersicum HOM05D001633 ORTHO05D002880 3.4e-06 55.1 53 54.7
Sopen01g049490 Solanum pennellii HOM05D001633 ORTHO05D002880 3.4e-06 55.1 53 54.7
PGSC0003DMG400025847 Solanum tuberosum HOM05D001633 ORTHO05D002880 3.4e-06 55.1 53 54.7
vmacro22068 Vaccinium macrocarpon HOM05D001633 ORTHO05D002880 3.4e-06 55.1 44 61.4
CAN.G107.2 Capsicum annuum HOM05D001633 ORTHO05D002880 4.4e-06 54.7 37 62.2
Cfa013674 Carpinus fangiana HOM05D001633 ORTHO05D002880 4.4e-06 54.7 77 46.8
RhsimUnG0125700 Rhododendron simsii HOM05D001633 ORTHO05D002880 4.4e-06 54.7 57 54.4
Dinv44972 Davidia involucrata HOM05D001633 ORTHO05D002880 5.7e-06 54.3 35 71.4
Nitab4.5_0004685g0070 Nicotiana tabacum HOM05D001633 ORTHO05D002880 5.7e-06 54.3 53 50.9
TAR625G0291 Trochodendron aralioides HOM05D001633 ORTHO05D002880 5.7e-06 54.3 57 50.9
CiPaw.06G167300 Carya illinoinensis HOM05D001633 ORTHO05D002880 7.5e-06 53.9 53 54.7
MD10G1102900 Malus domestica HOM05D001633 ORTHO05D002880 7.5e-06 53.9 58 50.0
Nitab4.5_0000934g0070 Nicotiana tabacum HOM05D001633 ORTHO05D002880 7.5e-06 53.9 48 54.2
Peaxi162Scf00081g01320 Petunia axillaris HOM05D001633 ORTHO05D002880 7.5e-06 53.9 48 54.2
Thhalv10022819m.g Eutrema salsugineum HOM05D001633 ORTHO05D002880 9.8e-06 53.5 77 45.5
Glyma.10G258700 Glycine max HOM05D001633 ORTHO05D002880 9.8e-06 53.5 72 45.8
PGSC0003DMG400000866 Solanum tuberosum HOM05D001633 ORTHO05D002880 9.8e-06 53.5 46 54.3
TWI14G1255 Tripterygium wilfordii HOM05D001633 ORTHO05D002880 9.8e-06 53.5 49 59.2
TWI59G0414 Tripterygium wilfordii HOM05D001633 ORTHO05D002880 9.8e-06 53.5 56 53.6


User provided reference genes

Program Settings