Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 3.8e-96 354.8 170 100.0
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 3.3e-84 315.1 168 88.1
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 1.3e-83 313.2 170 86.5
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.3e-83 313.2 168 88.1
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 1.7e-83 312.8 168 87.5
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 1.2e-81 306.6 168 86.3
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.6e-81 305.4 168 86.3
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.6e-81 305.4 170 85.3
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 4.5e-81 304.7 170 85.3
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 5.9e-81 304.3 168 83.9
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 5.9e-81 304.3 170 83.5
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 7.7e-81 303.9 170 84.7
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 7.7e-81 303.9 166 85.5
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 7.7e-81 303.9 165 87.3
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 1.3e-80 303.1 170 84.7
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 1.3e-80 303.1 167 84.4
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 2.9e-80 302.0 169 84.6
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 3.8e-80 301.6 168 85.1
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 5.0e-80 301.2 168 84.5
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 5.0e-80 301.2 168 85.1
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 8.5e-80 300.4 168 83.3
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 1.5e-79 299.7 168 83.9
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 1.5e-79 299.7 174 83.9
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 1.5e-79 299.7 168 82.7
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 1.9e-79 299.3 166 84.9
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 2.5e-79 298.9 164 86.0
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 4.2e-79 298.1 168 83.3
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 4.2e-79 298.1 170 83.5
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 5.5e-79 297.7 174 82.8
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 5.5e-79 297.7 166 85.5
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 5.5e-79 297.7 168 82.1
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 7.2e-79 297.4 174 82.2
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.2e-78 296.6 168 83.3
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.2e-78 296.6 168 83.3
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.6e-78 296.2 168 83.3
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 2.7e-78 295.4 174 82.2
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 2.7e-78 295.4 172 83.1
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 1.4e-77 293.1 166 82.5
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.8e-77 292.7 169 83.4
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.3e-77 292.4 164 83.5
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 3.0e-77 292.0 164 82.3
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 4.0e-77 291.6 172 81.4
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 6.7e-77 290.8 168 83.3
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 1.5e-76 289.7 168 80.4
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 2.0e-76 289.3 172 82.0
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 2.0e-76 289.3 165 82.4
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 2.6e-76 288.9 169 81.7
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 2.6e-76 288.9 165 82.4
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 4.4e-76 288.1 176 80.7
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 5.7e-76 287.7 174 79.9
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 5.7e-76 287.7 165 83.6
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 5.7e-76 287.7 167 82.6
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 7.5e-76 287.3 168 80.4
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 4.8e-75 284.6 171 78.9
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 6.3e-75 284.3 176 79.5
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 6.3e-75 284.3 176 78.4
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 1.1e-74 283.5 168 79.2
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 1.8e-74 282.7 168 79.8
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 4.1e-74 281.6 151 87.4
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 4.1e-74 281.6 155 84.5
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 4.1e-74 281.6 174 78.2
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 5.3e-74 281.2 164 81.7
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 5.3e-74 281.2 165 80.6
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 1.2e-73 280.0 176 79.5
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 1.2e-73 280.0 161 82.6
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 1.2e-73 280.0 168 79.2
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.6e-73 279.6 165 81.2
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 1.6e-73 279.6 167 79.6
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 2.0e-73 279.3 164 79.9
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 2.7e-73 278.9 164 81.1
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 4.5e-73 278.1 165 80.0
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 5.9e-73 277.7 155 83.2
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 5.9e-73 277.7 165 78.2
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 5.9e-73 277.7 165 78.2
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 2.9e-72 275.4 162 80.9
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 2.9e-72 275.4 171 76.0
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 5.0e-72 274.6 156 82.7
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 1.5e-71 273.1 165 78.8
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 1.5e-71 273.1 168 79.2
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 2.5e-71 272.3 165 78.2
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 4.2e-71 271.6 162 77.8
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 1.2e-70 270.0 169 78.7
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.2e-70 270.0 166 77.7
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 3.6e-70 268.5 156 79.5
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 3.6e-70 268.5 170 78.2
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.4e-69 266.5 163 77.3
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 4.0e-69 265.0 164 76.8
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 5.2e-69 264.6 168 76.8
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 1.2e-68 263.5 165 75.8
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 1.5e-68 263.1 165 77.0
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 2.0e-68 262.7 158 80.4
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.7e-67 259.6 166 72.3
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 1.7e-67 259.6 156 76.9
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 2.8e-67 258.8 165 76.4
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 1.4e-66 256.5 165 73.3
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 4.1e-66 255.0 156 76.9
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 5.4e-66 254.6 160 76.2
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 7.0e-66 254.2 167 75.4
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 9.1e-66 253.8 156 76.3
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 1.6e-65 253.1 166 74.1
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 3.5e-65 251.9 139 83.5
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 3.5e-65 251.9 139 83.5
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 3.5e-65 251.9 188 67.6
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 7.7e-65 250.8 156 75.6
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 6.5e-64 247.7 171 70.2
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 9.5e-63 243.8 188 64.9
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 7.5e-60 234.2 166 72.9
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.7e-59 233.0 179 65.4
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.8e-58 229.6 126 84.9
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 9.2e-58 227.3 142 78.2
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 1.0e-56 223.8 150 69.3
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.3e-56 222.6 150 70.7
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.9e-55 219.5 161 68.9
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 4.3e-55 218.4 157 65.0
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 5.6e-55 218.0 134 79.1
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 1.0e-53 213.8 158 66.5
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 4.0e-53 211.8 314 41.7
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 4.6e-49 198.4 112 81.2
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 5.0e-48 194.9 172 61.0
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 7.8e-41 171.0 306 37.9
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 4.7e-38 161.8 229 44.5
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 3.1e-37 159.1 209 45.0
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 6.8e-29 131.3 76 77.6
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.5e-28 130.2 84 77.4
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 5.8e-28 128.3 80 72.5
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 2.3e-24 116.3 66 81.8
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 5.2e-21 105.1 55 81.8
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 7.3e-15 84.7 44 79.5
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 1.2e-12 77.4 69 50.7
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 1.7e-11 73.6 88 44.3
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 4.2e-10 68.9 44 75.0
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.1e-09 66.6 119 35.3
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 6.7e-08 61.6 39 69.2


User provided reference genes

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