Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc205.12 Carica papaya HOM05D003500 ORTHO05D003919 1.7e-73 279.3 139 100.0
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 1.8e-11 73.2 68 66.2
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 5.3e-11 71.6 71 60.6
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 5.3e-11 71.6 61 65.6
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 6.9e-11 71.2 71 60.6
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 9.0e-11 70.9 70 64.3
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.0e-10 69.7 55 69.1
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 4.4e-10 68.6 55 67.3
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 6.4e-09 64.7 61 60.7
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 1.1e-08 63.9 56 62.5
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.4e-08 63.5 59 64.4
Peaxi162Scf00105g00615 Petunia axillaris HOM05D003500 ORTHO05D003919 4.2e-08 62.0 69 56.5
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 5.4e-08 61.6 59 62.7
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 9.3e-08 60.8 65 55.4
COL.COLO4_18713 Corchorus olitorius HOM05D003500 ORTHO05D003919 9.3e-08 60.8 61 54.1
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 2.1e-07 59.7 73 52.1
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 2.7e-07 59.3 65 55.4
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 4.6e-07 58.5 59 61.0
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 4.6e-07 58.5 63 60.3
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 6.0e-07 58.2 76 55.3
Nitab4.5_0000250g0140 Nicotiana tabacum HOM05D003500 ORTHO05D003919 6.0e-07 58.2 64 56.2
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 7.9e-07 57.8 74 44.6
Cc08_g08590 Coffea canephora HOM05D003500 ORTHO05D003919 1.0e-06 57.4 64 53.1
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.3e-06 57.0 68 51.5
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 1.7e-06 56.6 63 57.1
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 2.3e-06 56.2 68 55.9
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 3.0e-06 55.8 70 47.1
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 3.0e-06 55.8 65 50.8
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 5.1e-06 55.1 72 52.8
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 5.1e-06 55.1 44 68.2
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 6.6e-06 54.7 34 79.4
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 6.6e-06 54.7 54 61.1
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 6.6e-06 54.7 56 60.7
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 8.7e-06 54.3 52 55.8
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 8.7e-06 54.3 52 55.8
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 8.7e-06 54.3 56 60.7


User provided reference genes

Program Settings