Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 0.0e+00 1354.0 689 100.0
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 1.6e-161 573.9 676 50.6
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 2.6e-151 540.0 679 48.3
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 5.8e-151 538.9 677 49.6
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 1.7e-147 527.3 686 48.7
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 1.7e-142 510.8 658 47.7
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 1.4e-141 507.7 690 47.7
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 9.2e-141 505.0 677 47.4
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 6.2e-137 492.3 691 47.2
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 3.1e-136 490.0 678 46.2
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 6.4e-134 482.3 712 44.5
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 1.1e-130 471.5 675 45.6
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 6.2e-129 465.7 680 45.1
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 4.0e-128 463.0 674 43.8
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 2.0e-127 460.7 627 45.5
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 1.3e-126 458.0 543 51.7
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 5.4e-125 452.6 682 43.5
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 7.1e-125 452.2 599 47.4
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.6e-124 451.1 701 43.4
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 1.6e-124 451.1 683 44.5
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.5e-122 444.5 559 48.5
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.3e-121 441.4 559 48.3
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 8.1e-121 438.7 559 48.3
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 1.4e-120 438.0 651 43.8
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 1.8e-120 437.6 711 41.8
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.3e-118 431.4 643 43.9
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.7e-118 431.0 580 47.2
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 1.2e-116 424.9 678 43.7
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 1.2e-116 424.9 595 44.2
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 2.1e-116 424.1 687 41.2
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 6.0e-116 422.5 677 41.4
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.0e-115 420.2 673 42.5
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 4.8e-113 412.9 623 44.3
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 1.8e-112 411.0 691 41.2
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 2.4e-112 410.6 686 43.9
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 5.3e-112 409.5 606 44.9
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 9.0e-112 408.7 676 40.4
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 1.2e-111 408.3 676 39.9
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 7.6e-111 405.6 514 47.1
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 2.9e-110 403.7 676 39.8
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.1e-109 401.7 606 44.6
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 4.2e-109 399.8 578 44.6
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 5.1e-107 392.9 694 41.6
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 5.1e-107 392.9 727 39.1
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.3e-105 388.3 657 40.5
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 2.1e-105 387.5 680 39.6
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 6.2e-105 386.0 592 43.6
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 8.2e-105 385.6 677 39.0
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 1.8e-104 384.4 631 41.8
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 9.0e-104 382.1 675 38.8
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 4.5e-103 379.8 686 43.3
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.3e-102 378.3 803 36.1
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 2.9e-102 377.1 637 39.7
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 4.2e-101 373.2 692 39.9
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 4.2e-101 373.2 613 40.9
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 6.0e-100 369.4 691 39.8
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 6.0e-100 369.4 629 40.1
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 3.0e-99 367.1 638 39.3
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 3.3e-98 363.6 559 42.9
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 5.7e-98 362.8 590 41.2
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 5.7e-98 362.8 682 38.0
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 6.3e-97 359.4 634 38.3
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 8.2e-97 359.0 674 38.4
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 8.2e-97 359.0 577 41.6
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 4.1e-96 356.7 675 37.9
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 6.9e-96 355.9 621 40.9
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.6e-95 354.0 602 39.7
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 4.5e-95 353.2 675 39.4
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 2.9e-94 350.5 614 39.9
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 6.7e-91 339.3 706 37.4
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 1.1e-90 338.6 683 36.7
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 7.4e-90 335.9 699 38.2
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 1.3e-89 335.1 691 38.1
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 6.3e-89 332.8 586 39.2
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 1.8e-88 331.3 631 38.2
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 1.0e-86 325.5 679 37.4
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 2.9e-86 323.9 637 38.1
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 3.8e-86 323.6 637 38.0
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 5.0e-86 323.2 637 38.1
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 4.2e-85 320.1 475 44.4
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 2.1e-84 317.8 495 44.0
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 3.0e-83 313.9 658 37.5
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 3.9e-83 313.5 488 42.2
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 5.1e-83 313.2 566 38.9
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 1.1e-82 312.0 657 37.3
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 4.1e-80 303.5 519 39.1
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.1e-80 303.5 680 35.7
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.0e-78 296.6 446 43.7
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 9.4e-77 292.4 553 37.1
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 2.1e-76 291.2 467 40.0
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 4.7e-76 290.0 556 36.7
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 3.9e-75 287.0 745 35.4
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 6.3e-73 279.6 697 33.9
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 1.5e-69 268.5 696 33.8
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 3.2e-69 267.3 698 33.2
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 1.2e-68 265.4 706 35.1
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 4.7e-68 263.5 685 32.0
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 3.0e-67 260.8 629 33.5
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 5.3e-64 250.0 701 33.4
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 1.6e-63 248.4 630 34.8
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 2.0e-63 248.1 707 32.4
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 6.5e-62 243.0 575 34.8
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 2.5e-61 241.1 673 33.6
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 8.8e-59 232.6 691 32.6
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 2.0e-58 231.5 596 32.9
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 5.7e-58 229.9 612 35.0
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 1.4e-56 225.3 650 30.8
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 1.8e-56 224.9 742 31.1
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 7.7e-55 219.5 687 32.6
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 2.3e-51 208.0 607 31.6
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 9.8e-50 202.6 607 31.3
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 6.8e-35 153.3 450 30.7
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 8.3e-33 146.4 216 44.0
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 4.7e-28 130.6 492 28.0
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.4e-27 129.0 480 27.9
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 1.8e-27 128.6 276 35.5
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 9.2e-24 116.3 445 28.3
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 6.2e-20 103.6 224 33.9
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 8.7e-14 83.2 170 38.8
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 4.4e-10 70.9 73 53.4
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 1.3e-09 69.3 249 23.7
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 3.5e-07 61.2 188 31.4
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 1.3e-06 59.3 490 23.7
Zm00001eb203960 Zea mays HOM05D006267 ORTHO05D007490 2.3e-06 58.5 187 26.2


User provided reference genes

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