Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc20.118 Carica papaya HOM05D008303 ORTHO05D010386 2.9e-74 282.0 157 100.0
COL.COLO4_36725 Corchorus olitorius HOM05D008303 ORTHO05D010386 6.1e-16 88.2 144 45.8
Cfa005292 Carpinus fangiana HOM05D008303 ORTHO05D010386 1.0e-15 87.4 141 44.7
Manes.04G070500 Manihot esculenta HOM05D008303 ORTHO05D010386 1.0e-15 87.4 149 47.7
Manes.04G070400 Manihot esculenta HOM05D008303 ORTHO05D010386 2.3e-15 86.3 149 48.3
COL.COLO4_36726 Corchorus olitorius HOM05D008303 ORTHO05D010386 5.2e-15 85.1 144 45.1
Haze_02095 Corylus avellana HOM05D008303 ORTHO05D010386 2.0e-14 83.2 141 48.2
Thecc.02G054500 Theobroma cacao HOM05D008303 ORTHO05D010386 7.5e-14 81.3 143 45.5
Nitab4.5_0004867g0100 Nicotiana tabacum HOM05D008303 ORTHO05D010386 2.8e-13 79.3 148 39.9
Ciclev10030089m.g Citrus clementina HOM05D008303 ORTHO05D010386 1.4e-12 77.0 162 37.0
Migut.B00055 Erythranthe guttata HOM05D008303 ORTHO05D010386 1.4e-12 77.0 149 40.9
Potri.009G138700 Populus trichocarpa HOM05D008303 ORTHO05D010386 3.1e-12 75.9 145 41.4
Dinv14130 Davidia involucrata HOM05D001535 ORTHO05D003710 4.1e-12 75.5 100 48.0
Gohir.D01G161900 Gossypium hirsutum HOM05D008303 ORTHO05D010386 4.1e-12 75.5 148 41.2
Rhsim11G0193900 Rhododendron simsii HOM05D008303 ORTHO05D010386 7.0e-12 74.7 155 41.3
QL11p052465 Quercus lobata HOM05D008303 ORTHO05D010386 1.2e-11 73.9 142 43.0
Gorai.002G200800 Gossypium raimondii HOM05D008303 ORTHO05D010386 1.6e-11 73.6 148 42.6
Ciclev10030098m.g Citrus clementina HOM05D008303 ORTHO05D010386 3.5e-11 72.4 100 46.0
Aqoxy5G01096 Aquilegia oxysepala HOM05D008303 ORTHO05D010386 1.0e-10 70.9 154 39.6
Potri.004G178500 Populus trichocarpa HOM05D008303 ORTHO05D010386 2.9e-10 69.3 152 37.5
Gohir.A01G170900 Gossypium hirsutum HOM05D008303 ORTHO05D010386 3.8e-10 68.9 148 39.2
Nn6g31905 Nelumbo nucifera HOM05D008303 ORTHO05D010386 6.6e-10 68.2 153 37.3
Nitab4.5_0009111g0020 Nicotiana tabacum HOM05D008303 ORTHO05D010386 6.6e-10 68.2 148 37.8
Gohir.A03G206100 Gossypium hirsutum HOM05D008303 ORTHO05D010386 8.6e-10 67.8 148 39.9
Gorai.005G255400 Gossypium raimondii HOM05D008303 ORTHO05D010386 8.6e-10 67.8 148 39.9
Prupe.8G169600 Prunus persica HOM05D008303 ORTHO05D010386 8.6e-10 67.8 100 49.0
Gohir.D02G227500 Gossypium hirsutum HOM05D008303 ORTHO05D010386 1.1e-09 67.4 149 40.3
Sabra04G0120100 Salix brachista HOM05D008303 ORTHO05D010386 1.9e-09 66.6 152 38.2
MSTRG.5463 Avicennia marina HOM05D008303 ORTHO05D010386 3.3e-09 65.9 148 35.8
Atru.chr5.3448 Acer truncatum HOM05D008303 ORTHO05D010386 5.6e-09 65.1 151 40.4
Sopen01g053870 Solanum pennellii HOM05D008303 ORTHO05D010386 7.3e-09 64.7 144 35.4
CiPaw.06G120000 Carya illinoinensis HOM05D008303 ORTHO05D010386 9.5e-09 64.3 98 41.8
Migut.N01334 Erythranthe guttata HOM05D008303 ORTHO05D010386 1.2e-08 63.9 116 39.7
EL10Ac9g21335 Beta vulgaris HOM05D008303 ORTHO05D010386 3.6e-08 62.4 141 36.9
QL11p052446 Quercus lobata HOM05D008303 ORTHO05D010386 3.6e-08 62.4 117 40.2
Oeu015521.1 Olea europaea HOM05D008303 ORTHO05D010386 6.1e-08 61.6 138 34.8
CsaV3_7G001230 Cucumis sativus L. HOM05D008303 ORTHO05D010386 1.8e-07 60.1 134 35.8
PGSC0003DMG400018640 Solanum tuberosum HOM05D008303 ORTHO05D010386 1.8e-07 60.1 95 43.2
arahy.Tifrunner.gnm1.ann1.DC2STY Arachis hypogaea HOM05D008303 ORTHO05D010386 3.0e-07 59.3 101 40.6
MELO3C013332.2 Cucumis melo HOM05D008303 ORTHO05D010386 4.0e-07 58.9 134 41.0
Sabra09G0107400 Salix brachista HOM05D008303 ORTHO05D010386 1.2e-06 57.4 141 35.5
ClCG02G003900 Citrullus lanatus HOM05D008303 ORTHO05D010386 2.0e-06 56.6 133 35.3
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 5.8e-06 55.1 149 36.9


User provided reference genes

Program Settings