Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.6e-192 676.0 357 100.0
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 2.6e-115 419.5 346 67.3
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 2.1e-112 409.8 358 64.8
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.1e-108 397.5 359 61.8
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.8e-108 396.7 334 64.7
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 3.1e-108 396.0 359 61.8
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 5.3e-108 395.2 349 62.8
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 7.0e-108 394.8 347 63.7
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 9.1e-108 394.4 333 61.9
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 2.9e-106 389.4 337 61.1
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 3.8e-106 389.0 352 61.6
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 8.5e-106 387.9 342 63.2
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.9e-105 386.7 343 63.0
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 4.0e-103 379.0 342 62.3
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.2e-102 377.5 360 60.3
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.7e-101 373.6 354 58.8
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 4.1e-100 369.0 325 62.2
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 4.1e-100 369.0 359 57.9
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 2.0e-99 366.7 340 60.0
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 2.7e-99 366.3 374 57.5
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 1.3e-98 364.0 363 56.2
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.2e-98 363.2 352 58.8
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 2.2e-98 363.2 335 61.2
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 1.5e-97 360.5 340 60.0
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 4.2e-97 359.0 361 57.1
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.6e-96 357.1 359 56.3
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.8e-95 353.6 367 57.2
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 4.0e-95 352.4 351 55.3
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 8.8e-95 351.3 347 57.6
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 3.4e-94 349.4 362 55.2
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 7.5e-94 348.2 334 58.4
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 1.7e-93 347.1 319 59.6
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 1.7e-93 347.1 360 54.4
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 2.2e-93 346.7 335 57.6
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 2.2e-93 346.7 360 56.7
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 2.2e-93 346.7 360 56.7
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 2.8e-93 346.3 359 56.0
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 2.8e-93 346.3 332 58.1
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 8.3e-93 344.7 359 55.7
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 8.3e-93 344.7 359 54.9
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.8e-92 343.6 343 57.7
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 5.4e-92 342.0 340 58.5
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 7.0e-92 341.7 334 57.8
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 9.1e-92 341.3 332 58.1
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 4.5e-91 339.0 332 58.4
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 7.7e-91 338.2 346 55.5
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.0e-90 337.8 366 55.2
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 2.2e-90 336.7 324 59.0
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 2.2e-90 336.7 333 56.2
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 2.5e-89 333.2 322 58.4
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 7.2e-89 331.6 341 56.6
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.2e-88 330.9 327 57.8
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.2e-88 330.9 332 56.6
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.2e-88 330.9 332 56.6
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.1e-88 330.1 332 56.9
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 2.1e-88 330.1 326 57.1
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 4.7e-88 328.9 348 53.7
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.4e-87 327.4 330 56.1
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 5.2e-87 325.5 335 54.9
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.2e-86 324.3 331 58.6
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.0e-86 323.6 332 55.7
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 9.8e-86 321.2 442 46.2
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 1.3e-85 320.9 330 55.5
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 1.7e-85 320.5 331 56.8
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 4.9e-85 318.9 333 54.4
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.4e-84 317.4 319 56.1
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 3.1e-84 316.2 272 62.1
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 5.4e-84 315.5 350 53.7
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 7.0e-84 315.1 351 53.0
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 1.2e-83 314.3 341 53.1
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 2.7e-83 313.2 329 54.4
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 4.5e-83 312.4 356 52.0
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 4.5e-83 312.4 356 52.8
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 2.3e-82 310.1 346 52.0
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 7.3e-81 305.1 331 53.2
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 2.1e-80 303.5 355 51.5
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.6e-80 302.8 359 52.4
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 3.6e-80 302.8 345 49.0
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 4.7e-80 302.4 357 50.4
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.4e-79 300.8 360 51.7
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.3e-77 294.3 365 50.7
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 3.7e-77 292.7 325 52.0
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 6.4e-77 292.0 321 51.4
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 2.7e-75 286.6 322 52.5
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 4.6e-75 285.8 352 47.2
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 2.3e-74 283.5 327 49.8
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 3.9e-74 282.7 260 60.0
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 5.0e-74 282.3 336 51.5
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 6.4e-69 265.4 357 47.9
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 1.9e-68 263.8 287 52.6
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 1.7e-66 257.3 384 44.0
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 3.3e-65 253.1 323 47.7
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 5.8e-62 242.3 262 53.8
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 1.6e-56 224.2 444 37.8
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 6.4e-53 212.2 235 52.8
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 8.6e-50 201.8 184 59.8
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 1.2e-43 181.4 375 32.3
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 8.7e-42 175.3 230 49.6
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 8.1e-40 168.7 347 34.3
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 4.5e-38 162.9 286 40.9
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 2.2e-37 160.6 137 65.0
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 4.2e-28 129.8 134 55.2
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 3.9e-26 123.2 247 36.0
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 2.5e-25 120.6 94 67.0
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 2.9e-21 107.1 484 24.8
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 8.4e-21 105.5 84 66.7
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 6.0e-19 99.4 97 55.7
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 2.3e-18 97.4 198 40.4
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 3.3e-17 93.6 158 44.3
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 5.7e-17 92.8 251 29.5
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 2.8e-16 90.5 68 66.2
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.1e-15 88.6 336 25.9
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 1.8e-15 87.8 77 63.6
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 4.1e-15 86.7 206 30.1
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.8e-10 71.2 49 67.3
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 8.8e-10 68.9 130 38.5
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 5.7e-09 66.2 55 56.4
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.3e-08 65.1 70 54.3
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 1.3e-08 65.1 43 67.4
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 2.2e-08 64.3 75 48.0


User provided reference genes

Program Settings