Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2.7 Carica papaya HOM05D007403 ORTHO05D009306 1.2e-42 176.0 86 100.0
Gohir.D12G039900 Gossypium hirsutum HOM05D007403 ORTHO05D009306 5.9e-29 130.6 83 77.1
Gorai.008G041600 Gossypium raimondii HOM05D007403 ORTHO05D009306 5.9e-29 130.6 83 77.1
Thecc.02G040500 Theobroma cacao HOM05D007403 ORTHO05D009306 5.9e-29 130.6 83 75.9
Duzib132G0321 Durio zibethinus HOM05D007403 ORTHO05D009306 1.7e-28 129.0 83 77.1
Gohir.A12G032700 Gossypium hirsutum HOM05D007403 ORTHO05D009306 3.8e-28 127.9 83 75.9
GSVIVG01023003001 Vitis vinifera HOM05D007403 ORTHO05D009306 8.5e-28 126.7 85 70.6
Sp2g22680 Schrenkiella parvula HOM05D007403 ORTHO05D009306 3.2e-27 124.8 84 67.9
Potri.003G021100 Populus trichocarpa HOM05D007403 ORTHO05D009306 7.2e-27 123.6 85 67.1
QL02p098561 Quercus lobata HOM05D007403 ORTHO05D009306 9.4e-27 123.2 85 65.9
TAR381G0205 Trochodendron aralioides HOM05D007403 ORTHO05D009306 9.4e-27 123.2 83 69.9
Ciclev10000975m.g Citrus clementina HOM05D007403 ORTHO05D009306 1.2e-26 122.9 83 69.9
BraA02t08979Z Brassica rapa HOM05D007403 ORTHO05D009306 3.0e-25 118.2 84 64.3
Dinv19355 Davidia involucrata HOM05D007403 ORTHO05D009306 3.0e-25 118.2 84 63.1
Sabra03G0012400 Salix brachista HOM05D007403 ORTHO05D009306 3.0e-25 118.2 85 64.7
AL6G36340 Arabidopsis lyrata HOM05D007403 ORTHO05D009306 4.0e-25 117.9 84 64.3
A02p40120 Brassica napus HOM05D000219 ORTHO05D009306 5.2e-25 117.5 84 63.1
FvH4_5g30191 Fragaria vesca HOM05D007403 ORTHO05D009306 6.7e-25 117.1 85 62.4
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 6.7e-25 117.1 85 62.4
Ca_02259_v3 Cicer arietinum L. HOM05D007403 ORTHO05D009306 1.2e-24 116.3 83 67.5
Prupe.1G562100 Prunus persica HOM05D007403 ORTHO05D009306 1.2e-24 116.3 85 63.5
RcHm_v2.0_Chr7g0224451 Rosa chinensis HOM05D007403 ORTHO05D009306 2.0e-24 115.5 85 63.5
VMungo0540G0348 Vigna mungo HOM05D007403 ORTHO05D009306 2.0e-24 115.5 83 62.7
Ah.12g064270 Amaranthus hybridus HOM05D007403 ORTHO05D009306 2.6e-24 115.2 83 63.9
THA.LOC104798998 Tarenaya hassleriana HOM05D007403 ORTHO05D009306 2.6e-24 115.2 85 62.4
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.3e-24 114.8 85 61.2
BcaC03g17949 Brassica carinata HOM05D000219 ORTHO05D009306 5.7e-24 114.0 84 60.7
BolC2t12064H Brassica oleracea HOM05D007403 ORTHO05D009306 5.7e-24 114.0 84 60.7
Thhalv10004004m.g Eutrema salsugineum HOM05D007403 ORTHO05D009306 9.7e-24 113.2 84 63.1
BcaB07g29919 Brassica carinata HOM05D007403 ORTHO05D009306 1.3e-23 112.8 84 60.7
Lj5A250G19 Lonicera japonica HOM05D007403 ORTHO05D009306 1.3e-23 112.8 83 60.2
COL.COLO4_17887 Corchorus olitorius HOM05D007403 ORTHO05D009306 1.7e-23 112.5 79 70.9
FAN08G0644 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.7e-23 112.5 85 60.0
TWI59G1473 Tripterygium wilfordii HOM05D007403 ORTHO05D009306 2.2e-23 112.1 83 59.0
C02p60090 Brassica napus HOM05D000219 ORTHO05D009306 2.8e-23 111.7 84 61.9
AUR62024767 Chenopodium quinoa HOM05D007403 ORTHO05D009306 3.7e-23 111.3 83 66.3
Sc06g0000290 Simmondsia chinensis HOM05D007403 ORTHO05D009306 8.3e-23 110.2 85 62.4
Medtr2g043740 Medicago truncatula HOM05D007403 ORTHO05D009306 1.1e-22 109.8 83 61.4
AT5G24750 Arabidopsis thaliana HOM05D007403 ORTHO05D009306 2.4e-22 108.6 85 62.4
AUR62037684 Chenopodium quinoa HOM05D007403 ORTHO05D009306 2.4e-22 108.6 83 65.1
FAN13G0620 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.4e-22 108.6 76 65.8
MBI04_g33335_MAGBIO Magnolia biondii HOM05D007403 ORTHO05D009306 2.4e-22 108.6 83 62.7
MD08G1224800 Malus domestica HOM05D007403 ORTHO05D009306 2.4e-22 108.6 83 63.9
Phvul.006G212700 Phaseolus vulgaris HOM05D007403 ORTHO05D009306 2.4e-22 108.6 83 61.4
Phvul.006G212950 Phaseolus vulgaris HOM05D007403 ORTHO05D009306 2.4e-22 108.6 83 61.4
Ah.12g060250 Amaranthus hybridus HOM05D007403 ORTHO05D009306 3.1e-22 108.2 83 61.4
CANSAT11G1055 Cannabis sativa HOM05D007403 ORTHO05D009306 3.1e-22 108.2 83 60.2
Rhsim11G0131100 Rhododendron simsii HOM05D007403 ORTHO05D009306 3.1e-22 108.2 85 58.8
Aa31LG11G3980 Aethionema arabicum HOM05D007403 ORTHO05D009306 4.1e-22 107.8 84 59.5
CSS0040815 Camellia sinensis var. sinensis HOM05D007403 ORTHO05D009306 4.1e-22 107.8 85 56.5
TPR.G15151 Trifolium pratense HOM05D007403 ORTHO05D009306 4.1e-22 107.8 83 62.7
Hma1.2p1_0557F.1_g178360 Hydrangea macrophylla HOM05D007403 ORTHO05D009306 7.0e-22 107.1 84 58.3
Psat1g137240 Pisum sativum HOM05D007403 ORTHO05D009306 1.2e-21 106.3 83 60.2
CARHR188740 Cardamine hirsuta HOM05D007403 ORTHO05D009306 2.0e-21 105.5 85 61.2
Aqoxy5G02020 Aquilegia oxysepala HOM05D007403 ORTHO05D009306 3.5e-21 104.8 83 61.4
AUR62029925 Chenopodium quinoa HOM05D007403 ORTHO05D009306 3.5e-21 104.8 83 62.7
HPP92_020049 Vanilla planifolia HOM05D007403 ORTHO05D009306 4.5e-21 104.4 82 58.5
EL10Ac2g02449 Beta vulgaris HOM05D007403 ORTHO05D009306 5.9e-21 104.0 83 62.7
Sopen01g046850 Solanum pennellii HOM05D007403 ORTHO05D009306 5.9e-21 104.0 83 59.0
Carub.0006s2260 Capsella rubella HOM05D007403 ORTHO05D009306 7.7e-21 103.6 84 57.1
Nitab4.5_0011920g0020 Nicotiana tabacum HOM05D007403 ORTHO05D009306 7.7e-21 103.6 83 59.0
Cc02_g22320 Coffea canephora HOM05D007403 ORTHO05D009306 1.0e-20 103.2 85 56.5
Solyc01g104410.4 Solanum lycopersicum HOM05D007403 ORTHO05D009306 1.0e-20 103.2 83 59.0
vmacro01773 Vaccinium macrocarpon HOM05D007403 ORTHO05D009306 1.0e-20 103.2 85 57.6
DCAR_001817 Daucus carota HOM05D007403 ORTHO05D009306 1.3e-20 102.8 83 54.2
Eucgr.G00612 Eucalyptus grandis HOM05D007403 ORTHO05D009306 2.2e-20 102.1 84 58.3
Lsat_1_v5_gn_7_77881 Lactuca sativa HOM05D007403 ORTHO05D009306 2.9e-20 101.7 83 57.8
PGSC0003DMG400023750 Solanum tuberosum HOM05D007403 ORTHO05D009306 3.8e-20 101.3 83 57.8
PSO210G5116 Papaver somniferum HOM05D007403 ORTHO05D009306 6.5e-20 100.5 83 54.2
Peaxi162Scf00011g00136 Petunia axillaris HOM05D007403 ORTHO05D009306 1.1e-19 99.8 83 57.8
CAN.G1305.34 Capsicum annuum HOM05D007403 ORTHO05D009306 1.5e-19 99.4 83 55.4
Manes.10G131400 Manihot esculenta HOM05D007403 ORTHO05D009306 3.2e-19 98.2 69 69.6
CiPaw.05G043100 Carya illinoinensis HOM05D007403 ORTHO05D009306 2.1e-18 95.5 69 62.3
SalBow5G2609 Salvia bowleyana HOM05D007403 ORTHO05D009306 2.1e-18 95.5 83 55.4
SGA_v2.0_scaffold1G00325 Striga asiatica HOM05D007403 ORTHO05D009306 2.1e-18 95.5 85 54.1
ATR1120G172 Amborella trichopoda HOM05D007403 ORTHO05D009306 8.0e-18 93.6 85 51.8
Migut.B00669 Erythranthe guttata HOM05D007403 ORTHO05D009306 1.8e-17 92.4 83 55.4
Atru.chr6.1105 Acer truncatum HOM05D007403 ORTHO05D009306 5.2e-17 90.9 69 62.3
Glyma.08G184700 Glycine max HOM05D007403 ORTHO05D009306 5.2e-17 90.9 69 62.3
unitig_27.g24942 Utricularia gibba HOM05D007403 ORTHO05D009306 1.1e-14 83.2 83 47.0
Nitab4.5_0006604g0010 Nicotiana tabacum HOM05D007403 ORTHO05D009306 1.2e-13 79.7 69 56.5
Pp3c9_24800 Physcomitrium patens HOM05D007403 ORTHO05D009306 8.6e-12 73.6 84 42.9
AagrBONN_evm.TU.Sc2ySwM_344.1532 Anthoceros agrestis HOM05D007403 ORTHO05D009306 3.3e-11 71.6 83 41.0
CSS0033747 Camellia sinensis var. sinensis HOM05D007403 ORTHO05D009306 5.2e-09 64.3 85 40.0
SEGI_06818 Sequoiadendron giganteum HOM05D007403 ORTHO05D009306 5.2e-09 64.3 74 44.6
CDE08G0506 Ceratophyllum demersum HOM05D001336 ORTHO05D001211 1.4e-06 56.2 83 37.3
Lalb_Chr18g0060841 Lupinus albus HOM05D007403 ORTHO05D009306 3.1e-06 55.1 47 59.6


User provided reference genes

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