Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2.218 Carica papaya HOM05D004417 ORTHO05D005528 7.5e-62 240.4 122 100.0
COL.COLO4_13080 Corchorus olitorius HOM05D004417 ORTHO05D005528 4.1e-52 208.0 119 87.4
Atru.chr11.518 Acer truncatum HOM05D004417 ORTHO05D005528 4.6e-51 204.5 119 85.7
Duzib251G0182 Durio zibethinus HOM05D004417 ORTHO05D005528 7.8e-51 203.8 119 85.7
Prupe.1G331400 Prunus persica HOM05D004417 ORTHO05D005528 3.0e-50 201.8 119 84.9
QL03p034852 Quercus lobata HOM05D004417 ORTHO05D005528 3.0e-50 201.8 119 84.0
BcaB07g32314 Brassica carinata HOM05D004417 ORTHO05D005528 8.6e-50 200.3 121 82.6
MD16G1020900 Malus domestica HOM05D004417 ORTHO05D005528 8.6e-50 200.3 118 85.6
Actinidia25877 Actinidia chinensis HOM05D004417 ORTHO05D005528 1.5e-49 199.5 121 80.2
BcaB03g14154 Brassica carinata HOM05D004417 ORTHO05D005528 1.5e-49 199.5 121 81.8
Gohir.A03G118200 Gossypium hirsutum HOM05D004417 ORTHO05D005528 1.9e-49 199.1 119 84.0
Gohir.D02G141800 Gossypium hirsutum HOM05D004417 ORTHO05D005528 1.9e-49 199.1 119 84.0
Gorai.005G158900 Gossypium raimondii HOM05D004417 ORTHO05D005528 1.9e-49 199.1 119 84.0
A07p13940 Brassica napus HOM05D004417 ORTHO05D005528 2.5e-49 198.7 121 81.0
BraA07t29150Z Brassica rapa HOM05D004417 ORTHO05D005528 2.5e-49 198.7 121 81.0
CANSAT01G0135 Cannabis sativa HOM05D004417 ORTHO05D005528 2.5e-49 198.7 119 82.4
FvH4_4g33860 Fragaria vesca HOM05D004417 ORTHO05D005528 3.3e-49 198.4 118 83.9
FAN12G0749 Fragaria x ananassa HOM05D004417 ORTHO05D005528 3.3e-49 198.4 118 83.9
FAN17G2093 Fragaria x ananassa HOM05D004417 ORTHO05D005528 3.3e-49 198.4 118 83.9
BcaC06g35029 Brassica carinata HOM05D004417 ORTHO05D005528 5.6e-49 197.6 121 80.2
C07p20490 Brassica napus HOM05D004417 ORTHO05D005528 5.6e-49 197.6 121 80.2
BolC7t42575H Brassica oleracea HOM05D004417 ORTHO05D005528 5.6e-49 197.6 121 80.2
Thhalv10006548m.g Eutrema salsugineum HOM05D004417 ORTHO05D005528 5.6e-49 197.6 121 80.2
FAN07G1109 Fragaria x ananassa HOM05D004417 ORTHO05D005528 9.5e-49 196.8 118 83.9
CSS0010110 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 1.2e-48 196.4 122 79.5
CiPaw.05G190700 Carya illinoinensis HOM05D004417 ORTHO05D005528 1.2e-48 196.4 119 83.2
AL1G37020 Arabidopsis lyrata HOM05D004417 ORTHO05D005528 1.6e-48 196.1 121 80.2
AT1G23230 Arabidopsis thaliana HOM05D004417 ORTHO05D005528 1.6e-48 196.1 121 80.2
Carub.0001s2282 Capsella rubella HOM05D004417 ORTHO05D005528 1.6e-48 196.1 121 80.2
Ciclev10014030m.g Citrus clementina HOM05D004417 ORTHO05D005528 2.1e-48 195.7 119 82.4
SalBow8G1470 Salvia bowleyana HOM05D004417 ORTHO05D005528 2.1e-48 195.7 114 81.6
RcHm_v2.0_Chr4g0443371 Rosa chinensis HOM05D004417 ORTHO05D005528 2.8e-48 195.3 118 82.2
Sp1g20700 Schrenkiella parvula HOM05D004417 ORTHO05D005528 2.8e-48 195.3 121 80.2
Thecc.02G290300 Theobroma cacao HOM05D004417 ORTHO05D005528 2.8e-48 195.3 119 83.2
MD13G1030100 Malus domestica HOM05D004417 ORTHO05D005528 4.7e-48 194.5 118 83.9
Lj2g0013863 Lotus japonicus HOM05D004417 ORTHO05D005528 1.1e-47 193.4 118 82.2
Phvul.003G021100 Phaseolus vulgaris HOM05D004417 ORTHO05D005528 1.1e-47 193.4 118 79.7
CARHR023690 Cardamine hirsuta HOM05D004417 ORTHO05D005528 1.4e-47 193.0 121 80.2
Aa31LG7G7270 Aethionema arabicum HOM05D004417 ORTHO05D005528 1.8e-47 192.6 121 78.5
Manes.17G082000 Manihot esculenta HOM05D004417 ORTHO05D005528 1.8e-47 192.6 119 79.0
GSVIVG01011680001 Vitis vinifera HOM05D004417 ORTHO05D005528 1.8e-47 192.6 122 77.0
SGA_v2.0_scaffold50G18460 Striga asiatica HOM05D004417 ORTHO05D005528 2.3e-47 192.2 122 77.9
Glyma.09G123500 Glycine max HOM05D004417 ORTHO05D005528 3.1e-47 191.8 118 79.7
BcaC05g26233 Brassica carinata HOM05D004417 ORTHO05D005528 4.0e-47 191.4 123 81.3
BolC5t30944H Brassica oleracea HOM05D004417 ORTHO05D005528 4.0e-47 191.4 123 81.3
Ca_12568_v3 Cicer arietinum L. HOM05D004417 ORTHO05D005528 4.0e-47 191.4 118 79.7
A09p41530 Brassica napus HOM05D004417 ORTHO05D005528 5.2e-47 191.0 123 81.3
C05p22460 Brassica napus HOM05D004417 ORTHO05D005528 5.2e-47 191.0 123 81.3
BraA09t39644Z Brassica rapa HOM05D004417 ORTHO05D005528 5.2e-47 191.0 123 81.3
EL10Ac6g14152 Beta vulgaris HOM05D004417 ORTHO05D005528 8.9e-47 190.3 118 78.8
Migut.L00554 Erythranthe guttata HOM05D004417 ORTHO05D005528 1.2e-46 189.9 122 77.0
Potri.008G133300 Populus trichocarpa HOM05D004417 ORTHO05D005528 1.2e-46 189.9 119 80.7
Lj3A865G68 Lonicera japonica HOM05D004417 ORTHO05D005528 1.5e-46 189.5 122 77.9
Lalb_Chr13g0290691 Lupinus albus HOM05D004417 ORTHO05D005528 1.5e-46 189.5 118 79.7
PGR042G2175 Punica granatum HOM05D004417 ORTHO05D005528 2.0e-46 189.1 119 79.8
Medtr1g031910 Medicago truncatula HOM05D004417 ORTHO05D005528 2.6e-46 188.7 118 79.7
Dinv18635 Davidia involucrata HOM05D004417 ORTHO05D005528 3.4e-46 188.3 118 79.7
Dinv26250 Davidia involucrata HOM05D004417 ORTHO05D005528 3.4e-46 188.3 118 79.7
Nitab4.5_0008542g0020 Nicotiana tabacum HOM05D004417 ORTHO05D005528 4.4e-46 188.0 122 77.9
MELO3C005286.2 Cucumis melo HOM05D004417 ORTHO05D005528 7.5e-46 187.2 118 78.8
ClCG01G006440 Citrullus lanatus HOM05D004417 ORTHO05D005528 9.8e-46 186.8 118 78.8
CsaV3_5G028240 Cucumis sativus L. HOM05D004417 ORTHO05D005528 9.8e-46 186.8 118 78.8
Aqoxy3G00033 Aquilegia oxysepala HOM05D004417 ORTHO05D005528 2.2e-45 185.7 122 74.6
Oeu018613.1 Olea europaea HOM05D004417 ORTHO05D005528 2.2e-45 185.7 122 74.6
Cc11_g08040 Coffea canephora HOM05D004417 ORTHO05D005528 3.7e-45 184.9 118 78.0
PSO017G2325 Papaver somniferum HOM05D004417 ORTHO05D005528 3.7e-45 184.9 119 73.9
PSO478G2641 Papaver somniferum HOM05D004417 ORTHO05D005528 3.7e-45 184.9 119 73.9
Psat6g045000 Pisum sativum HOM05D004417 ORTHO05D005528 3.7e-45 184.9 118 78.0
THA.LOC104822992 Tarenaya hassleriana HOM05D004417 ORTHO05D005528 3.7e-45 184.9 121 77.7
AUR62014157 Chenopodium quinoa HOM05D004417 ORTHO05D005528 4.9e-45 184.5 118 76.3
Solyc05g016440.3 Solanum lycopersicum HOM05D004417 ORTHO05D005528 8.3e-45 183.7 115 79.1
Sopen05g013790 Solanum pennellii HOM05D004417 ORTHO05D005528 8.3e-45 183.7 115 79.1
MSTRG.7613 Avicennia marina HOM05D004417 ORTHO05D005528 1.4e-44 183.0 121 74.4
PGR042G0049 Punica granatum HOM05D004417 ORTHO05D005528 1.4e-44 183.0 119 77.3
Rhsim09G0063500 Rhododendron simsii HOM05D004417 ORTHO05D005528 1.4e-44 183.0 119 74.8
Hund24934 Selenicereus undatus HOM05D004417 ORTHO05D005528 1.9e-44 182.6 118 75.4
Sed0000894 Sechium edule HOM05D004417 ORTHO05D005528 2.4e-44 182.2 118 78.0
Lsat_1_v5_gn_3_55840 Lactuca sativa HOM05D004417 ORTHO05D005528 3.2e-44 181.8 118 74.6
HanXRQChr17g0567351 Helianthus annuus HOM05D004417 ORTHO05D005528 5.4e-44 181.0 118 73.7
TWI74G0839 Tripterygium wilfordii HOM05D004417 ORTHO05D005528 5.4e-44 181.0 118 75.4
TAR374G0310 Trochodendron aralioides HOM05D004417 ORTHO05D005528 5.4e-44 181.0 119 75.6
Nitab4.5_0000018g0020 Nicotiana tabacum HOM05D004417 ORTHO05D005528 7.1e-44 180.6 115 77.4
vmacro00393 Vaccinium macrocarpon HOM05D004417 ORTHO05D005528 1.6e-43 179.5 130 70.0
Sc14g0006960 Simmondsia chinensis HOM05D004417 ORTHO05D005528 2.1e-43 179.1 118 72.9
ECA246G0702 Erigeron canadensis HOM05D004417 ORTHO05D005528 3.0e-42 175.3 118 70.3
DCAR_007321 Daucus carota HOM05D004417 ORTHO05D005528 3.9e-42 174.9 118 70.3
arahy.Tifrunner.gnm1.ann1.GYT9TN Arachis hypogaea HOM05D004417 ORTHO05D005528 5.1e-42 174.5 117 70.1
Eucgr.B02952 Eucalyptus grandis HOM05D004417 ORTHO05D005528 1.9e-41 172.6 122 73.8
Lalb_Chr16g0387721 Lupinus albus HOM05D004417 ORTHO05D005528 2.5e-41 172.2 119 68.9
Sabra08G0101900 Salix brachista HOM05D004417 ORTHO05D005528 5.6e-41 171.0 152 62.5
SHI04469 Sapria himalayana HOM05D004417 ORTHO05D005528 7.3e-41 170.6 114 74.6
Ah.03g137400 Amaranthus hybridus HOM05D004417 ORTHO05D005528 1.2e-40 169.9 118 70.3
Zm00001eb253700 Zea mays HOM05D004417 ORTHO05D005528 1.2e-40 169.9 122 66.4
Nn4g24297 Nelumbo nucifera HOM05D004417 ORTHO05D005528 1.6e-40 169.5 119 70.6
Lsat_1_v5_gn_4_12821 Lactuca sativa HOM05D004417 ORTHO05D005528 2.1e-40 169.1 118 72.0
CAN.G45.11 Capsicum annuum HOM05D004417 ORTHO05D005528 3.1e-39 165.2 108 75.0
Eucgr.B02949 Eucalyptus grandis HOM05D004417 ORTHO05D005528 3.1e-39 165.2 110 79.1
TPR.G36876 Trifolium pratense HOM05D004417 ORTHO05D005528 3.1e-39 165.2 140 62.9
Os02g0732700 Oryza sativa ssp. japonica HOM05D004417 ORTHO05D005528 2.0e-38 162.5 122 63.1
CDE07G0372 Ceratophyllum demersum HOM05D004417 ORTHO05D005528 1.9e-36 156.0 122 59.8
SEGI_05575 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 1.9e-36 156.0 121 60.3
Actinidia25661 Actinidia chinensis HOM05D004417 ORTHO05D005528 1.2e-35 153.3 100 76.0
HanXRQChr17g0566691 Helianthus annuus HOM05D004417 ORTHO05D005528 1.6e-35 152.9 113 66.4
Gorai.010G022100 Gossypium raimondii HOM05D004417 ORTHO05D003549 1.7e-34 149.4 97 79.4
CSS0030927 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 3.9e-34 148.3 124 66.9
VMungo1215G1550 Vigna mungo HOM05D004417 ORTHO05D005528 2.5e-33 145.6 101 71.3
AUR62038465 Chenopodium quinoa HOM05D004417 ORTHO05D005528 3.6e-32 141.7 90 74.4
ATR0753G138 Amborella trichopoda HOM05D004417 ORTHO05D005528 1.2e-30 136.7 123 56.9
Gohir.A02G156900 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.9e-29 132.1 82 80.5
Gohir.A03G114800 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.9e-29 132.1 82 80.5
Gohir.D01G098050 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.9e-29 132.1 82 80.5
Gohir.D10G083700 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.9e-29 132.1 82 80.5
Gohir.D10G134850 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.9e-29 132.1 82 80.5
Gohir.D13G141401 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.9e-29 132.1 82 80.5
Gohir.D10G083766 Gossypium hirsutum HOM05D003153 ORTHO05D003549 3.8e-29 131.7 82 79.3
DCAR_030256 Daucus carota HOM05D004417 ORTHO05D005528 4.9e-29 131.3 118 53.4
Gorai.011G113600 Gossypium raimondii HOM05D003153 ORTHO05D003549 1.4e-28 129.8 82 79.3
SMO364G0727 Selaginella moellendorffii HOM05D004417 ORTHO05D005528 5.4e-28 127.9 115 52.2
Pp3c27_2940 Physcomitrium patens HOM05D004417 ORTHO05D005528 2.8e-24 115.5 116 49.1
Mapoly0005s0093 Marchantia polymorpha HOM05D004417 ORTHO05D005528 4.8e-24 114.8 118 49.2
Gohir.1Z049383 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.9e-21 105.5 69 76.8
Peaxi162Scf00376g00032 Petunia axillaris HOM05D004417 ORTHO05D005528 2.9e-21 105.5 85 65.9
Gohir.A13G139960 Gossypium hirsutum HOM05D003153 ORTHO05D003549 8.4e-21 104.0 69 75.4
unitig_899.g15633 Utricularia gibba HOM05D004417 ORTHO05D005528 1.4e-20 103.2 115 51.3
Nitab4.5_0005025g0010 Nicotiana tabacum HOM05D004417 ORTHO05D005528 5.6e-09 64.7 96 47.9


User provided reference genes

Program Settings