Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2.214 Carica papaya HOM05D004417 ORTHO05D005528 0.0e+00 1107.8 587 100.0
COL.COLO4_13080 Corchorus olitorius HOM05D004417 ORTHO05D005528 1.9e-158 563.5 325 88.6
Duzib251G0182 Durio zibethinus HOM05D004417 ORTHO05D005528 2.4e-158 563.1 325 88.9
Gohir.A03G118100 Gossypium hirsutum HOM05D004417 ORTHO05D005528 1.2e-157 560.8 325 88.9
Gorai.005G158900 Gossypium raimondii HOM05D004417 ORTHO05D005528 1.7e-156 557.0 325 88.3
Thecc.02G290300 Theobroma cacao HOM05D004417 ORTHO05D005528 1.7e-156 557.0 325 87.7
Gohir.D02G141800 Gossypium hirsutum HOM05D004417 ORTHO05D005528 5.1e-156 555.4 325 88.3
Manes.17G082000 Manihot esculenta HOM05D004417 ORTHO05D005528 5.6e-155 552.0 325 87.7
Atru.chr11.518 Acer truncatum HOM05D004417 ORTHO05D005528 2.1e-154 550.1 325 88.3
FAN17G2093 Fragaria x ananassa HOM05D004417 ORTHO05D005528 3.1e-153 546.2 325 85.2
Ciclev10014030m.g Citrus clementina HOM05D004417 ORTHO05D005528 1.5e-152 543.9 325 87.1
FvH4_4g33860 Fragaria vesca HOM05D004417 ORTHO05D005528 3.4e-152 542.7 325 85.2
FAN12G0749 Fragaria x ananassa HOM05D004417 ORTHO05D005528 3.4e-152 542.7 325 85.2
FAN07G1109 Fragaria x ananassa HOM05D004417 ORTHO05D005528 5.8e-152 542.0 325 85.2
Haze_10916 Corylus avellana HOM05D004417 ORTHO05D005528 1.3e-151 540.8 325 85.8
GSVIVG01011680001 Vitis vinifera HOM05D004417 ORTHO05D005528 1.3e-151 540.8 325 85.2
TAR374G0310 Trochodendron aralioides HOM05D004417 ORTHO05D005528 1.7e-151 540.4 325 86.2
Lj2g0013863 Lotus japonicus HOM05D004417 ORTHO05D005528 8.4e-151 538.1 325 84.0
RcHm_v2.0_Chr4g0443371 Rosa chinensis HOM05D004417 ORTHO05D005528 8.4e-151 538.1 325 84.9
THA.LOC104822992 Tarenaya hassleriana HOM05D004417 ORTHO05D005528 1.9e-150 537.0 328 83.5
Prupe.1G331400 Prunus persica HOM05D004417 ORTHO05D005528 5.4e-150 535.4 325 84.9
Potri.008G133300 Populus trichocarpa HOM05D004417 ORTHO05D005528 9.3e-150 534.6 325 85.5
QL03p034852 Quercus lobata HOM05D004417 ORTHO05D005528 3.5e-149 532.7 325 85.5
VMungo1215G0458 Vigna mungo HOM05D004417 ORTHO05D005528 6.6e-148 528.5 325 83.1
Actinidia25877 Actinidia chinensis HOM05D004417 ORTHO05D005528 8.7e-148 528.1 348 78.4
TWI74G0839 Tripterygium wilfordii HOM05D004417 ORTHO05D005528 8.7e-148 528.1 325 83.7
Sabra08G0101900 Salix brachista HOM05D004417 ORTHO05D005528 1.1e-147 527.7 325 84.3
Dinv18635 Davidia involucrata HOM05D004417 ORTHO05D005528 1.9e-147 526.9 325 82.2
Dinv26250 Davidia involucrata HOM05D004417 ORTHO05D005528 1.9e-147 526.9 325 82.2
Glyma.09G123500 Glycine max HOM05D004417 ORTHO05D005528 9.6e-147 524.6 325 82.2
CSS0030927 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 2.1e-146 523.5 325 83.1
Eucgr.B02952 Eucalyptus grandis HOM05D004417 ORTHO05D005528 2.4e-145 520.0 325 83.7
vmacro00393 Vaccinium macrocarpon HOM05D004417 ORTHO05D005528 2.4e-145 520.0 325 81.5
Aa31LG7G7270 Aethionema arabicum HOM05D004417 ORTHO05D005528 5.3e-145 518.8 329 81.2
MD16G1020900 Malus domestica HOM05D004417 ORTHO05D005528 1.2e-144 517.7 325 82.2
Carub.0001s2282 Capsella rubella HOM05D004417 ORTHO05D005528 1.5e-144 517.3 329 80.2
Sp1g20700 Schrenkiella parvula HOM05D004417 ORTHO05D005528 2.0e-144 516.9 329 80.5
Phvul.003G021100 Phaseolus vulgaris HOM05D004417 ORTHO05D005528 2.6e-144 516.5 325 81.5
Rhsim09G0063500 Rhododendron simsii HOM05D004417 ORTHO05D005528 2.6e-144 516.5 325 80.6
Lalb_Chr13g0290691 Lupinus albus HOM05D004417 ORTHO05D005528 3.4e-144 516.2 325 81.5
CANSAT01G0135 Cannabis sativa HOM05D004417 ORTHO05D005528 5.8e-144 515.4 325 82.8
TPR.G36876 Trifolium pratense HOM05D004417 ORTHO05D005528 7.6e-144 515.0 325 80.3
Psat6g045000 Pisum sativum HOM05D004417 ORTHO05D005528 9.9e-144 514.6 325 80.9
CARHR023690 Cardamine hirsuta HOM05D004417 ORTHO05D005528 2.2e-143 513.5 329 79.9
Ca_12568_v3 Cicer arietinum L. HOM05D004417 ORTHO05D005528 2.2e-143 513.5 325 80.9
Lj3A865G68 Lonicera japonica HOM05D004417 ORTHO05D005528 2.9e-143 513.1 325 82.5
Nn4g24297 Nelumbo nucifera HOM05D004417 ORTHO05D005528 2.9e-143 513.1 325 81.5
AT1G23230 Arabidopsis thaliana HOM05D004417 ORTHO05D005528 4.9e-143 512.3 329 79.6
MD13G1030100 Malus domestica HOM05D004417 ORTHO05D005528 8.4e-143 511.5 326 81.3
AL1G37020 Arabidopsis lyrata HOM05D004417 ORTHO05D005528 7.1e-142 508.4 329 79.3
Lalb_Chr16g0387721 Lupinus albus HOM05D004417 ORTHO05D005528 7.1e-142 508.4 325 79.7
Solyc05g016440.3 Solanum lycopersicum HOM05D004417 ORTHO05D005528 2.7e-141 506.5 325 77.5
Nitab4.5_0000018g0020 Nicotiana tabacum HOM05D004417 ORTHO05D005528 3.5e-141 506.1 325 78.2
BcaB03g14154 Brassica carinata HOM05D004417 ORTHO05D005528 4.6e-141 505.8 329 79.6
Eucgr.B02949 Eucalyptus grandis HOM05D004417 ORTHO05D005528 4.6e-141 505.8 325 81.8
Sopen05g013790 Solanum pennellii HOM05D004417 ORTHO05D005528 7.9e-141 505.0 325 77.2
A07p13940 Brassica napus HOM05D004417 ORTHO05D005528 1.0e-140 504.6 331 79.8
C07p20490 Brassica napus HOM05D004417 ORTHO05D005528 1.0e-140 504.6 332 79.8
BraA07t29150Z Brassica rapa HOM05D004417 ORTHO05D005528 1.0e-140 504.6 331 79.8
Medtr1g031910 Medicago truncatula HOM05D004417 ORTHO05D005528 1.0e-140 504.6 325 78.5
BcaC06g35029 Brassica carinata HOM05D004417 ORTHO05D005528 1.3e-140 504.2 332 79.8
BolC7t42575H Brassica oleracea HOM05D004417 ORTHO05D005528 3.9e-140 502.7 332 79.5
Thhalv10006548m.g Eutrema salsugineum HOM05D004417 ORTHO05D005528 1.5e-139 500.7 328 80.2
Peaxi162Scf00376g00032 Petunia axillaris HOM05D004417 ORTHO05D005528 1.9e-139 500.4 325 78.8
BcaB07g32314 Brassica carinata HOM05D004417 ORTHO05D005528 5.6e-139 498.8 332 77.7
Nitab4.5_0008542g0030 Nicotiana tabacum HOM05D004417 ORTHO05D005528 5.6e-139 498.8 325 76.6
arahy.Tifrunner.gnm1.ann1.W0X7A3 Arachis hypogaea HOM05D004417 ORTHO05D005528 6.2e-138 495.4 325 79.1
BcaB07g32312 Brassica carinata HOM05D004417 ORTHO05D005528 6.2e-138 495.4 331 77.6
Sc14g0006960 Simmondsia chinensis HOM05D004417 ORTHO05D005528 6.2e-138 495.4 325 78.5
BolC5t30944H Brassica oleracea HOM05D004417 ORTHO05D005528 8.1e-138 495.0 331 77.6
Oeu018613.1 Olea europaea HOM05D004417 ORTHO05D005528 1.8e-137 493.8 325 78.5
BraA09t39644Z Brassica rapa HOM05D004417 ORTHO05D005528 5.3e-137 492.3 331 77.3
arahy.Tifrunner.gnm1.ann1.GYT9TN Arachis hypogaea HOM05D004417 ORTHO05D005528 6.9e-137 491.9 351 74.6
A09p41530 Brassica napus HOM05D004417 ORTHO05D005528 6.9e-137 491.9 331 77.3
ClCG01G006440 Citrullus lanatus HOM05D004417 ORTHO05D005528 3.4e-136 489.6 325 78.2
C05p22460 Brassica napus HOM05D004417 ORTHO05D005528 9.9e-136 488.0 330 77.0
Cc11_g08040 Coffea canephora HOM05D004417 ORTHO05D005528 2.9e-135 486.5 325 75.4
Ah.03g137400 Amaranthus hybridus HOM05D004417 ORTHO05D005528 4.9e-135 485.7 325 76.6
Sed0000894 Sechium edule HOM05D004417 ORTHO05D005528 1.4e-134 484.2 325 78.2
DCAR_007321 Daucus carota HOM05D004417 ORTHO05D005528 4.2e-134 482.6 325 77.8
PSO478G2641 Papaver somniferum HOM05D004417 ORTHO05D005528 1.2e-133 481.1 325 76.3
AUR62014157 Chenopodium quinoa HOM05D004417 ORTHO05D005528 2.1e-133 480.3 325 76.9
EL10Ac6g14152 Beta vulgaris HOM05D004417 ORTHO05D005528 2.7e-133 479.9 325 76.0
SalBow8G1470 Salvia bowleyana HOM05D004417 ORTHO05D005528 3.5e-133 479.6 325 77.2
PSO017G2325 Papaver somniferum HOM05D004417 ORTHO05D005528 6.0e-133 478.8 325 75.7
CsaV3_5G028240 Cucumis sativus L. HOM05D004417 ORTHO05D005528 1.3e-132 477.6 325 76.9
AUR62038465 Chenopodium quinoa HOM05D004417 ORTHO05D005528 2.3e-132 476.9 325 76.6
Aqoxy3G00033 Aquilegia oxysepala HOM05D004417 ORTHO05D005528 3.3e-131 473.0 325 73.5
MSTRG.7613 Avicennia marina HOM05D004417 ORTHO05D005528 1.6e-130 470.7 325 78.8
MELO3C005286.2 Cucumis melo HOM05D004417 ORTHO05D005528 1.6e-130 470.7 318 77.7
Hund24934 Selenicereus undatus HOM05D004417 ORTHO05D005528 3.4e-128 463.0 325 73.8
ATR0753G138 Amborella trichopoda HOM05D004417 ORTHO05D005528 3.2e-126 456.4 323 74.6
CSS0010110 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 6.0e-125 452.2 283 83.4
HanXRQChr17g0567351 Helianthus annuus HOM05D004417 ORTHO05D005528 1.3e-119 434.5 325 71.7
Migut.L00554 Erythranthe guttata HOM05D004417 ORTHO05D005528 5.0e-119 432.6 328 72.6
ECA246G0702 Erigeron canadensis HOM05D004417 ORTHO05D005528 1.4e-118 431.0 325 70.2
Lsat_1_v5_gn_3_55840 Lactuca sativa HOM05D004417 ORTHO05D005528 3.0e-116 423.3 325 69.8
PGR042G0049 Punica granatum HOM05D004417 ORTHO05D005528 1.5e-115 421.0 330 72.4
PGR042G2175 Punica granatum HOM05D004417 ORTHO05D005528 2.8e-114 416.8 331 71.3
SGA_v2.0_scaffold50G18460 Striga asiatica HOM05D004417 ORTHO05D005528 1.0e-111 408.3 322 68.3
Os02g0732700 Oryza sativa ssp. japonica HOM05D004417 ORTHO05D005528 2.5e-110 403.7 326 68.7
CiPaw.05G190700 Carya illinoinensis HOM05D004417 ORTHO05D005528 7.9e-109 398.7 257 82.1
Zm00001eb253700 Zea mays HOM05D004417 ORTHO05D005528 7.9e-109 398.7 326 66.9
CDE07G0372 Ceratophyllum demersum HOM05D004417 ORTHO05D005528 1.5e-104 384.4 325 65.8
unitig_899.g15633 Utricularia gibba HOM05D004417 ORTHO05D005528 2.3e-100 370.5 323 62.2
SHI04465 Sapria himalayana HOM05D004417 ORTHO05D005528 1.0e-95 355.1 323 61.6
SEGI_38026 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 4.7e-93 346.3 323 58.2
DCAR_030256 Daucus carota HOM05D004417 ORTHO05D005528 1.2e-88 331.6 314 56.7
Psat2g053360 Pisum sativum HOM05D004417 ORTHO05D005528 3.7e-82 310.1 249 66.3
HanXRQChr17g0566691 Helianthus annuus HOM05D004417 ORTHO05D005528 1.2e-77 295.0 331 54.4
BcaC05g26233 Brassica carinata HOM05D004417 ORTHO05D005528 7.5e-75 285.8 340 50.6
SMO364G0727 Selaginella moellendorffii HOM05D004417 ORTHO05D005528 5.2e-68 263.1 323 48.0
Actinidia25662 Actinidia chinensis HOM05D004417 ORTHO05D005528 2.0e-64 251.1 150 86.7
Lsat_1_v5_gn_4_12821 Lactuca sativa HOM05D004417 ORTHO05D005528 2.7e-64 250.8 311 49.2
Pp3c27_2940 Physcomitrium patens HOM05D004417 ORTHO05D005528 8.6e-63 245.7 324 48.1
Mapoly0005s0093 Marchantia polymorpha HOM05D004417 ORTHO05D005528 1.5e-62 245.0 330 45.2
SEGI_15839 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 1.4e-44 185.3 194 54.6
SEGI_21450 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 1.4e-44 185.3 194 54.6
Actinidia25661 Actinidia chinensis HOM05D004417 ORTHO05D005528 3.2e-41 174.1 124 69.4
SEGI_05575 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 8.1e-29 132.9 88 68.2
HPP92_024820 Vanilla planifolia HOM05D004417 ORTHO05D005528 2.1e-24 118.2 108 61.1
Potri.010G108350 Populus trichocarpa HOM05D004417 ORTHO05D005528 5.5e-09 67.0 32 93.8


User provided reference genes

Program Settings