Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2.206 Carica papaya HOM05D007313 ORTHO05D005299 4.5e-33 144.1 75 100.0
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 1.0e-13 79.7 86 59.3
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 3.0e-13 78.2 70 64.3
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 3.0e-13 78.2 70 64.3
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 3.0e-13 78.2 70 64.3
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 4.0e-13 77.8 78 59.0
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 5.2e-13 77.4 78 61.5
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 8.8e-13 76.6 84 58.3
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 2.0e-12 75.5 82 59.8
Cfa015015 Carpinus fangiana HOM05D007313 ORTHO05D005299 3.4e-12 74.7 60 65.0
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.3e-11 72.8 81 59.3
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 1.3e-11 72.8 81 59.3
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 8.3e-11 70.1 77 54.5
Haze_10890 Corylus avellana HOM05D007313 ORTHO05D005299 1.8e-10 68.9 50 66.0
Potri.008G134100 Populus trichocarpa HOM05D007313 ORTHO05D005299 1.8e-10 68.9 61 63.9
AT1G67920 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 3.1e-10 68.2 65 61.5
AL2G26720 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 7.0e-10 67.0 65 60.0
Prupe.1G332700 Prunus persica HOM05D007313 ORTHO05D005299 9.1e-10 66.6 74 54.1
Carub.0002s1441 Capsella rubella HOM05D007313 ORTHO05D005299 1.2e-09 66.2 65 61.5
Sp5g22920 Schrenkiella parvula HOM05D007313 ORTHO05D005299 1.2e-09 66.2 61 65.6
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 2.0e-09 65.5 80 55.0
CARHR060560 Cardamine hirsuta HOM05D007313 ORTHO05D005299 3.5e-09 64.7 65 60.0
QL03p035637 Quercus lobata HOM05D007313 ORTHO05D005299 4.5e-09 64.3 75 52.0
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 5.9e-09 63.9 57 64.9
MD16G1019400 Malus domestica HOM05D007313 ORTHO05D005299 7.7e-09 63.5 71 52.1
BraA07t31073Z Brassica rapa HOM05D007313 ORTHO05D005299 1.0e-08 63.2 61 62.3
BcaB03g15149 Brassica carinata HOM05D007313 ORTHO05D005299 1.3e-08 62.8 66 59.1
BcaC08g46215 Brassica carinata HOM05D007313 ORTHO05D005299 1.7e-08 62.4 53 67.9
A07p32280 Brassica napus HOM05D007313 ORTHO05D005299 1.7e-08 62.4 61 62.3
BolC6t39221H Brassica oleracea HOM05D007313 ORTHO05D005299 1.7e-08 62.4 53 67.9
BraA07t30853Z Brassica rapa HOM05D007313 ORTHO05D005299 1.7e-08 62.4 61 62.3
Thhalv10019740m.g Eutrema salsugineum HOM05D007313 ORTHO05D005299 1.7e-08 62.4 79 53.2
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 2.2e-08 62.0 53 69.8
FAN22G0875 Fragaria x ananassa HOM05D007313 ORTHO05D005299 2.2e-08 62.0 58 62.1
Phvul.002G320600 Phaseolus vulgaris HOM05D007313 ORTHO05D005299 2.2e-08 62.0 52 65.4
BcaC08g46017 Brassica carinata HOM05D007313 ORTHO05D005299 3.8e-08 61.2 79 51.9
A07p34460 Brassica napus HOM05D007313 ORTHO05D005299 3.8e-08 61.2 61 60.7
C06p38120 Brassica napus HOM05D007313 ORTHO05D005299 3.8e-08 61.2 79 51.9
BolC6t38909H Brassica oleracea HOM05D007313 ORTHO05D005299 3.8e-08 61.2 79 51.9
Glyma.08G045300 Glycine max HOM05D007313 ORTHO05D005299 3.8e-08 61.2 58 58.6
Sabra08G0102600 Salix brachista HOM05D007313 ORTHO05D005299 3.8e-08 61.2 50 64.0
BcaB03g15385 Brassica carinata HOM05D007313 ORTHO05D005299 5.0e-08 60.8 79 50.6
FAN07G0870 Fragaria x ananassa HOM05D007313 ORTHO05D005299 6.5e-08 60.5 72 52.8
RcHm_v2.0_Chr4g0443131 Rosa chinensis HOM05D007313 ORTHO05D005299 6.5e-08 60.5 75 50.7
A02p14560 Brassica napus HOM05D007313 ORTHO05D005299 8.5e-08 60.1 70 57.1
BraA02t06526Z Brassica rapa HOM05D007313 ORTHO05D005299 8.5e-08 60.1 70 57.1
BcaB05g24323 Brassica carinata HOM05D007313 ORTHO05D005299 1.1e-07 59.7 53 66.0
BcaC03g14888 Brassica carinata HOM05D007313 ORTHO05D005299 1.1e-07 59.7 53 66.0
C02p23620 Brassica napus HOM05D007313 ORTHO05D005299 1.1e-07 59.7 53 66.0
BolC2t08492H Brassica oleracea HOM05D007313 ORTHO05D005299 1.1e-07 59.7 53 66.0
FvH4_4g33670 Fragaria vesca HOM05D007313 ORTHO05D005299 1.1e-07 59.7 58 60.3
FAN12G3843 Fragaria x ananassa HOM05D007313 ORTHO05D005299 1.1e-07 59.7 58 60.3
CARHR026470 Cardamine hirsuta HOM05D007313 ORTHO05D005299 2.5e-07 58.5 56 58.9
CSS0045507 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 3.2e-07 58.2 86 50.0
Carub.0001s2549 Capsella rubella HOM05D007313 ORTHO05D005299 3.2e-07 58.2 56 60.7
Sabra10G0078300 Salix brachista HOM05D007313 ORTHO05D005299 3.2e-07 58.2 50 62.0
Potri.010G107200 Populus trichocarpa HOM05D007313 ORTHO05D005299 5.5e-07 57.4 61 59.0
AL1G40310 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 7.2e-07 57.0 56 60.7
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 7.2e-07 57.0 58 62.1
Sp1g23170 Schrenkiella parvula HOM05D007313 ORTHO05D005299 9.4e-07 56.6 56 58.9
AT1G24600 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 1.2e-06 56.2 57 57.9
CSS0007506 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 1.2e-06 56.2 86 48.8
Glyma.05G238200 Glycine max HOM05D007313 ORTHO05D005299 1.2e-06 56.2 49 61.2
Lj4g0008951 Lotus japonicus HOM05D007313 ORTHO05D005299 1.2e-06 56.2 66 48.5
VMungo0540G1213 Vigna mungo HOM05D007313 ORTHO05D005299 1.6e-06 55.8 64 54.7
BcaB03g12049 Brassica carinata HOM05D007313 ORTHO05D005299 2.7e-06 55.1 81 48.1
TPR.G27729 Trifolium pratense HOM05D007313 ORTHO05D005299 2.7e-06 55.1 61 49.2
CiPaw.06G051300 Carya illinoinensis HOM05D007313 ORTHO05D005299 3.6e-06 54.7 58 53.4
ClCG01G006530 Citrullus lanatus HOM05D007313 ORTHO05D005299 3.6e-06 54.7 58 60.3
THA.LOC104825566 Tarenaya hassleriana HOM05D007313 ORTHO05D005299 3.6e-06 54.7 61 54.1
TPR.G18382 Trifolium pratense HOM05D008500 ORTHO05D005299 3.6e-06 54.7 66 57.6
A08p26710 Brassica napus HOM05D007313 ORTHO05D005299 8.0e-06 53.5 43 65.1
BraA08t34617Z Brassica rapa HOM05D007313 ORTHO05D005299 8.0e-06 53.5 43 65.1
MELO3C005274.2 Cucumis melo HOM05D007313 ORTHO05D005299 8.0e-06 53.5 58 58.6


User provided reference genes

Program Settings