Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 9.7e-121 436.8 217 100.0
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 9.2e-71 270.8 214 63.1
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 1.2e-70 270.4 214 62.1
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 2.1e-70 269.6 214 62.6
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 3.5e-70 268.9 214 62.6
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 3.5e-70 268.9 214 63.6
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 4.6e-70 268.5 214 62.6
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 4.6e-70 268.5 214 63.1
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 4.6e-70 268.5 214 62.6
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 6.0e-70 268.1 214 62.6
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 6.0e-70 268.1 214 62.1
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 7.8e-70 267.7 214 62.1
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 1.0e-69 267.3 214 61.2
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 1.3e-69 266.9 211 63.0
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 1.3e-69 266.9 214 61.7
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 1.3e-69 266.9 214 61.2
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 1.7e-69 266.5 214 61.7
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 2.3e-69 266.2 214 62.1
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 2.3e-69 266.2 214 61.7
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 3.0e-69 265.8 214 62.1
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 3.0e-69 265.8 214 61.7
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 5.1e-69 265.0 214 60.7
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 5.1e-69 265.0 214 61.2
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 5.1e-69 265.0 214 60.7
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 6.6e-69 264.6 214 60.7
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 6.6e-69 264.6 214 61.7
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 6.6e-69 264.6 214 61.7
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 6.6e-69 264.6 214 61.7
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 6.6e-69 264.6 214 62.1
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.1e-68 263.8 214 59.8
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.1e-68 263.8 214 61.2
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.5e-68 263.5 214 61.2
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.5e-68 263.5 214 61.2
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.5e-68 263.5 214 61.2
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 1.5e-68 263.5 214 61.2
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 1.9e-68 263.1 214 60.3
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 1.9e-68 263.1 214 60.7
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.9e-68 263.1 208 62.0
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.9e-68 263.1 214 61.2
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 1.9e-68 263.1 214 60.7
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 1.9e-68 263.1 214 61.2
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 2.5e-68 262.7 214 60.3
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 2.5e-68 262.7 214 61.7
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 2.5e-68 262.7 214 61.2
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 2.5e-68 262.7 214 59.8
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 3.3e-68 262.3 214 60.7
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 3.3e-68 262.3 214 61.2
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 3.3e-68 262.3 165 72.7
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 4.3e-68 261.9 214 60.3
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 4.3e-68 261.9 214 59.3
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 4.3e-68 261.9 214 60.3
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 5.6e-68 261.5 214 60.3
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 5.6e-68 261.5 214 59.3
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 5.6e-68 261.5 214 60.7
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 5.6e-68 261.5 223 60.1
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 7.3e-68 261.2 214 59.8
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 7.3e-68 261.2 214 60.3
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 9.5e-68 260.8 214 59.8
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 9.5e-68 260.8 214 59.8
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 9.5e-68 260.8 214 59.8
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 9.5e-68 260.8 214 59.8
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 9.5e-68 260.8 214 59.8
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 9.5e-68 260.8 214 59.3
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 9.5e-68 260.8 214 60.7
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 9.5e-68 260.8 214 59.8
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 9.5e-68 260.8 214 60.3
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 9.5e-68 260.8 168 72.0
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 1.2e-67 260.4 214 59.8
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.2e-67 260.4 214 59.8
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 1.2e-67 260.4 214 58.9
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 1.2e-67 260.4 168 71.4
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 1.6e-67 260.0 214 59.8
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 1.6e-67 260.0 214 60.3
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.6e-67 260.0 214 59.8
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 2.1e-67 259.6 214 60.7
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 2.1e-67 259.6 214 59.8
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 2.8e-67 259.2 215 60.0
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 2.8e-67 259.2 214 59.8
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 2.8e-67 259.2 214 59.3
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 3.6e-67 258.8 214 59.3
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 3.6e-67 258.8 214 59.8
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 3.6e-67 258.8 168 71.4
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 3.6e-67 258.8 168 71.4
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 4.7e-67 258.5 214 59.8
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 4.7e-67 258.5 214 58.4
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 4.7e-67 258.5 214 58.9
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 4.7e-67 258.5 165 72.1
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 6.2e-67 258.1 214 59.8
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 6.2e-67 258.1 214 60.7
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 6.2e-67 258.1 230 58.3
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 8.1e-67 257.7 214 58.9
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.1e-66 257.3 214 58.9
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 1.4e-66 256.9 214 58.4
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 1.4e-66 256.9 214 57.5
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 1.4e-66 256.9 214 58.4
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 1.8e-66 256.5 214 58.9
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 2.3e-66 256.1 214 58.9
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 3.1e-66 255.8 214 58.9
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 3.1e-66 255.8 214 58.4
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 3.1e-66 255.8 214 58.9
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 3.1e-66 255.8 214 58.4
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 4.0e-66 255.4 227 58.1
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 4.0e-66 255.4 208 60.1
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 5.2e-66 255.0 214 58.4
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 6.8e-66 254.6 208 60.1
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 6.8e-66 254.6 208 60.1
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 1.2e-65 253.8 228 56.6
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 1.5e-65 253.4 214 57.9
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 1.5e-65 253.4 214 57.9
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.5e-65 253.4 214 57.5
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 3.4e-65 252.3 165 69.7
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 2.2e-64 249.6 233 54.9
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 2.2e-64 249.6 233 54.5
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 2.9e-64 249.2 214 58.9
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 6.4e-64 248.1 211 56.9
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 1.9e-63 246.5 211 57.8
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 2.4e-63 246.1 238 54.2
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 4.1e-63 245.4 165 67.9
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 2.1e-62 243.0 168 66.1
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 2.7e-62 242.7 203 59.6
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 3.5e-62 242.3 213 55.9
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.0e-61 240.7 235 52.8
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 1.7e-61 240.0 168 64.3
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 6.6e-61 238.0 159 73.0
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 3.3e-60 235.7 181 60.8
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 3.3e-60 235.7 181 60.8
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 9.6e-60 234.2 168 63.7
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 6.2e-59 231.5 181 59.7
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 6.2e-59 231.5 199 59.3
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 8.1e-59 231.1 168 63.1
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 8.1e-59 231.1 165 63.0
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 2.4e-58 229.6 262 47.7
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 1.9e-55 219.9 214 54.7
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 4.6e-54 215.3 145 67.6
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 1.3e-53 213.8 167 62.9
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 2.3e-53 213.0 141 71.6
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 8.7e-53 211.1 168 57.1
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.1e-52 210.7 145 66.9
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 3.3e-52 209.1 184 57.1
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 7.3e-52 208.0 155 63.9
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 1.6e-51 206.8 190 57.4
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 6.2e-51 204.9 171 56.1
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 3.1e-50 202.6 214 50.9
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 3.1e-50 202.6 178 57.9
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 3.6e-43 179.1 160 55.0
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 3.4e-41 172.6 165 50.3
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.4e-39 166.4 100 76.0
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 3.2e-39 166.0 154 53.9
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 9.3e-39 164.5 127 59.8
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.2e-38 164.1 214 42.5
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 2.3e-37 159.8 136 57.4
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 3.9e-37 159.1 152 48.0
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.5e-36 157.1 95 74.7
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.4e-34 150.6 100 66.0
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 1.2e-33 147.5 95 69.5
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 2.2e-32 143.3 135 56.3
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 5.5e-31 138.7 211 40.8
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 1.3e-21 107.5 115 50.4
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 1.5e-20 104.0 139 41.7
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 1.3e-16 90.9 66 63.6
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 1.2e-09 67.8 38 76.3
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 4.5e-09 65.9 38 76.3
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 1.0e-08 64.7 38 76.3
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.1e-07 61.2 70 47.1
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 2.7e-06 56.6 82 43.9


User provided reference genes

Program Settings