Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2.148 Carica papaya HOM05D000003 ORTHO05D000004 9.4e-115 416.8 196 100.0
Cpa.g.sc418.2 Carica papaya HOM05D000003 ORTHO05D000004 7.2e-14 81.6 105 40.0
QL10p034885 Quercus lobata HOM05D004012 ORTHO05D000004 1.6e-13 80.5 158 34.8
Cpa.g.sc4.60 Carica papaya HOM05D000003 ORTHO05D000004 3.6e-13 79.3 98 40.8
Cpa.g.sc3.188 Carica papaya HOM05D003018 ORTHO05D003402 3.0e-12 76.3 102 43.1
CiPaw.07G027800 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.9e-12 75.9 105 37.1
Cpa.g.sc21.200 Carica papaya HOM05D000003 ORTHO05D000004 5.1e-12 75.5 108 35.2
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 6.7e-12 75.1 107 42.1
Oeu044182.1 Olea europaea HOM05D000003 ORTHO05D000004 8.8e-12 74.7 105 40.0
Oeu006782.2 Olea europaea HOM05D000688 ORTHO05D003888 1.1e-11 74.3 116 37.9
Atru.chr2.2918 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-11 73.6 116 36.2
Cpa.g.sc11.58 Carica papaya HOM05D000003 ORTHO05D000004 2.0e-11 73.6 102 44.1
Cpa.g.sc60.23 Carica papaya HOM05D000003 ORTHO05D000004 2.5e-11 73.2 105 38.1
Oeu024647.1 Olea europaea HOM05D000003 ORTHO05D000004 2.5e-11 73.2 116 37.1
Cpa.g.sc34.10 Carica papaya HOM05D000003 ORTHO05D000004 3.3e-11 72.8 98 37.8
Oeu016388.3 Olea europaea HOM05D000147 ORTHO05D005311 3.3e-11 72.8 105 38.1
Cpa.g.sc44.94 Carica papaya HOM05D000003 ORTHO05D000004 4.3e-11 72.4 103 35.9
QL02p026579 Quercus lobata HOM05D003230 ORTHO05D003680 1.3e-10 70.9 110 38.2
QL05p039589 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-10 70.9 102 37.3
Aqoxy3G01491 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-10 70.5 122 36.1
QL06p016008 Quercus lobata HOM05D003860 ORTHO05D004218 1.7e-10 70.5 166 33.1
CiPaw.06G006500 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.2e-10 70.1 93 41.9
Oeu001477.2 Olea europaea HOM05D000003 ORTHO05D000514 2.2e-10 70.1 105 37.1
CiPaw.02G164600 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.8e-10 69.7 110 37.3
Oeu052231.1 Olea europaea HOM05D000003 ORTHO05D000004 2.8e-10 69.7 102 36.3
CiPaw.08G163600 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.7e-10 69.3 119 37.0
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 3.7e-10 69.3 92 41.3
Cpa.g.sc1512.2 Carica papaya HOM05D000003 ORTHO05D000004 4.8e-10 68.9 105 36.2
Cpa.g.sc214.3 Carica papaya HOM05D000003 ORTHO05D000004 4.8e-10 68.9 95 38.9
CiPaw.13G126100 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.2e-10 68.2 92 40.2
QL02p033301 Quercus lobata HOM05D000003 ORTHO05D000004 8.2e-10 68.2 110 38.2
QL93p0089_0059 Quercus lobata HOM05D000003 ORTHO05D000004 8.2e-10 68.2 92 41.3
QL93p0340_0006 Quercus lobata HOM05D000003 ORTHO05D000004 8.2e-10 68.2 92 41.3
Aqoxy4G01023 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-09 67.8 112 36.6
CiPaw.03G178800 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.1e-09 67.8 105 37.1
QL02p038126 Quercus lobata HOM05D000003 ORTHO05D002480 1.4e-09 67.4 92 41.3
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 1.4e-09 67.4 93 39.8
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 1.4e-09 67.4 92 38.0
Atru.chr2.919 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-09 67.0 92 41.3
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-09 67.0 92 40.2
Atru.chr4.1942 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-09 66.2 123 31.7
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-09 65.9 110 35.5
QL10p033496 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-09 65.9 110 35.5
Cpa.g.sc817.4 Carica papaya HOM05D000003 ORTHO05D000004 5.3e-09 65.5 119 33.6
QL05p029744 Quercus lobata HOM05D000467 ORTHO05D000379 6.9e-09 65.1 92 40.2
QL05p030130 Quercus lobata HOM05D000467 ORTHO05D000379 6.9e-09 65.1 92 40.2
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 6.9e-09 65.1 92 40.2
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 6.9e-09 65.1 92 38.0
Cpa.g.sc18.134 Carica papaya HOM05D000003 ORTHO05D000004 9.1e-09 64.7 105 38.1
Cpa.g.sc28.147 Carica papaya HOM05D000003 ORTHO05D000004 1.2e-08 64.3 97 35.1
Cpa.g.sc787.1 Carica papaya HOM05D000003 ORTHO05D000004 1.2e-08 64.3 102 35.3
QL01p030508 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-08 64.3 138 31.9
QL06p038224 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-08 64.3 92 39.1
QL08p025862 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-08 64.3 105 34.3
Atru.chr1.3207 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-08 63.9 92 38.0
Cpa.g.sc363.2 Carica papaya HOM05D000003 ORTHO05D000004 1.5e-08 63.9 102 37.3
QL05p050638 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-08 63.9 110 37.3
Atru.chr2.253 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-08 63.5 120 34.2
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-08 63.5 102 38.2
Atru.chr12.2307 Acer truncatum HOM05D000003 ORTHO05D002259 2.6e-08 63.2 92 37.0
Atru.chr3.3875 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-08 63.2 92 38.0
Atru.chr8.1166 Acer truncatum HOM05D003047 ORTHO05D000627 2.6e-08 63.2 99 35.4
Cpa.g.sc556.4 Carica papaya HOM05D000003 ORTHO05D000004 2.6e-08 63.2 97 37.1
Atru.chr10.514 Acer truncatum HOM05D000003 ORTHO05D000004 3.4e-08 62.8 97 41.2
Oeu018113.1 Olea europaea HOM05D000003 ORTHO05D000004 4.5e-08 62.4 92 37.0
QL05p019557 Quercus lobata HOM05D000003 ORTHO05D000004 4.5e-08 62.4 122 34.4
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 4.5e-08 62.4 127 34.6
Atru.chr6.1410 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-08 62.0 123 32.5
QL09p018207 Quercus lobata HOM05D000003 ORTHO05D000004 5.9e-08 62.0 171 29.2
Sopen06g008270 Solanum pennellii HOM05D000003 ORTHO05D000004 5.9e-08 62.0 110 35.5
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.7e-08 61.6 96 37.5
CSS0030187 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.7e-08 61.6 103 35.0
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.7e-08 61.6 104 34.6
Oeu000958.1 Olea europaea HOM05D000412 ORTHO05D000429 7.7e-08 61.6 105 35.2
Atru.chr8.225 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-07 61.2 96 36.5
CSS0003011 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-07 61.2 95 35.8
Cpa.g.sc54.13 Carica papaya HOM05D000003 ORTHO05D000004 1.0e-07 61.2 109 33.0
Oeu038887.1 Olea europaea HOM05D000003 ORTHO05D000004 1.3e-07 60.8 105 34.3
QL11p018593 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-07 60.8 110 34.5
CSS0011611 Camellia sinensis var. sinensis HOM05D002853 ORTHO05D003030 1.7e-07 60.5 106 36.8
Oeu002500.1 Olea europaea HOM05D000003 ORTHO05D000004 1.7e-07 60.5 113 32.7
Oeu016608.2 Olea europaea HOM05D005531 ORTHO05D006332 1.7e-07 60.5 93 40.9
Atru.chr1.3579 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-07 60.1 95 34.7
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-07 60.1 92 39.1
Cpa.g.sc21.153 Carica papaya HOM05D000003 ORTHO05D000004 2.2e-07 60.1 81 39.5
QL01p009880 Quercus lobata HOM05D000230 ORTHO05D000176 2.2e-07 60.1 91 40.7
Atru.chr3.3475 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-07 59.7 92 32.6
Atru.chr6.413 Acer truncatum HOM05D000003 ORTHO05D002259 2.9e-07 59.7 93 37.6
Aqoxy7G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.8e-07 59.3 91 38.5
QL03p047161 Quercus lobata HOM05D003438 ORTHO05D000004 3.8e-07 59.3 93 39.8
Atru.chr10.984 Acer truncatum HOM05D000502 ORTHO05D002259 5.0e-07 58.9 92 35.9
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-07 58.9 92 34.8
Atru.chr2.2564 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-07 58.9 99 33.3
CSS0004655 Camellia sinensis var. sinensis HOM05D000164 ORTHO05D000004 5.0e-07 58.9 95 35.8
Cpa.g.sc2.64 Carica papaya HOM05D000003 ORTHO05D000004 5.0e-07 58.9 108 30.6
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-07 58.5 88 39.8
Atru.chr12.1368 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-07 58.5 94 36.2
Atru.chr2.282 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-07 58.5 93 34.4
Aqoxy2G02582 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.5e-07 58.5 91 34.1
PSO546G0001 Papaver somniferum HOM05D000003 ORTHO05D000004 6.5e-07 58.5 182 26.9
PSO729G0003 Papaver somniferum HOM05D000003 ORTHO05D000004 6.5e-07 58.5 104 32.7
QL05p078673 Quercus lobata HOM05D000003 ORTHO05D000004 6.5e-07 58.5 110 33.6
QL10p005473 Quercus lobata HOM05D000230 ORTHO05D000176 6.5e-07 58.5 111 36.0
Atru.chr10.61 Acer truncatum HOM05D000003 ORTHO05D000004 8.5e-07 58.2 94 36.2
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 8.5e-07 58.2 93 35.5
Atru.chr2.3028 Acer truncatum HOM05D000003 ORTHO05D000004 8.5e-07 58.2 90 36.7
Aqoxy4G00279 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.5e-07 58.2 91 38.5
MBI07_g44865_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 8.5e-07 58.2 98 31.6
PSO541G5293 Papaver somniferum HOM05D000003 ORTHO05D000004 8.5e-07 58.2 103 33.0
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 8.5e-07 58.2 111 36.0
QL10p019533 Quercus lobata HOM05D000003 ORTHO05D000004 8.5e-07 58.2 92 35.9
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 8.5e-07 58.2 111 36.0
Atru.chr6.510 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 57.8 95 35.8
PSO478G4686 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-06 57.8 126 31.0
QL02p060053 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 57.8 91 36.3
Atru.chr6.713 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 57.4 94 37.2
SEGI_27364 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 1.4e-06 57.4 99 28.3
Cpa.g.sc39.2 Carica papaya HOM05D000003 ORTHO05D000004 1.9e-06 57.0 100 31.0
Cpa.g.sc87.43 Carica papaya HOM05D000003 ORTHO05D000004 1.9e-06 57.0 76 36.8
QL06p003549 Quercus lobata HOM05D004938 ORTHO05D006035 1.9e-06 57.0 110 34.5
QL06p010043 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-06 57.0 111 34.2
Cpa.g.sc11.101 Carica papaya HOM05D000003 ORTHO05D000004 2.5e-06 56.6 90 34.4
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 2.5e-06 56.6 98 30.6
PGSC0003DMG400016171 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.5e-06 56.6 101 30.7
Atru.chr10.949 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-06 56.2 123 32.5
QL07p015194 Quercus lobata HOM05D000558 ORTHO05D006060 3.2e-06 56.2 92 37.0
Atru.chr13.1556 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-06 55.8 90 37.8
RcHm_v2.0_Chr4g0393411 Rosa chinensis HOM05D000003 ORTHO05D000004 4.2e-06 55.8 88 35.2
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-06 55.5 123 32.5
Atru.chr6.162 Acer truncatum HOM05D000003 ORTHO05D000004 5.5e-06 55.5 86 36.0
CSS0005407 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.5e-06 55.5 94 31.9
CSS0048351 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.5e-06 55.5 95 32.6
PSO210G1839 Papaver somniferum HOM05D000003 ORTHO05D000004 5.5e-06 55.5 91 37.4
PSO832G1445 Papaver somniferum HOM05D000003 ORTHO05D000004 5.5e-06 55.5 93 32.3
QL09p038899 Quercus lobata HOM05D004102 ORTHO05D005307 5.5e-06 55.5 70 37.1
CSS0022596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.2e-06 55.1 95 32.6
QL11p024822 Quercus lobata HOM05D000003 ORTHO05D000004 7.2e-06 55.1 104 32.7
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 9.4e-06 54.7 123 30.1
CSS0035702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.4e-06 54.7 96 31.2
PGSC0003DMG400006509 Solanum tuberosum HOM05D000003 ORTHO05D000004 9.4e-06 54.7 98 28.6


User provided reference genes

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