Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 8.3e-190 666.8 312 100.0
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 4.7e-108 395.2 328 59.1
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 9.7e-106 387.5 325 57.5
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 1.1e-104 384.0 325 57.8
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 5.3e-104 381.7 334 58.1
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 1.2e-103 380.6 329 58.1
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 1.2e-103 380.6 328 56.7
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 3.2e-101 372.5 326 58.6
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 5.5e-101 371.7 335 55.2
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 2.1e-100 369.8 326 55.2
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 1.0e-99 367.5 311 57.6
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 1.8e-99 366.7 334 56.6
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 1.8e-99 366.7 331 55.9
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 5.2e-99 365.2 325 55.4
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 8.2e-97 357.8 330 55.5
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 4.1e-96 355.5 334 54.5
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 5.3e-96 355.1 331 54.4
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 2.0e-95 353.2 328 55.2
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 3.5e-95 352.4 314 57.3
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 3.5e-95 352.4 324 55.6
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 5.9e-95 351.7 329 53.2
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 1.0e-94 350.9 329 54.1
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 1.3e-94 350.5 335 55.5
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 2.2e-94 349.7 331 53.5
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 2.9e-94 349.4 327 53.8
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 2.9e-94 349.4 327 53.8
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 2.9e-94 349.4 330 55.8
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 1.5e-93 347.1 328 54.3
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 1.9e-93 346.7 335 53.7
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 1.9e-93 346.7 329 52.6
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 3.2e-93 345.9 335 52.5
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 5.5e-93 345.1 328 53.0
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 9.4e-93 344.4 331 52.0
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 1.2e-92 344.0 329 52.9
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 1.6e-92 343.6 329 52.0
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 2.7e-92 342.8 329 52.6
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 2.7e-92 342.8 318 56.3
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 4.7e-92 342.0 327 53.8
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 8.0e-92 341.3 328 52.4
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.8e-91 340.1 327 53.8
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 2.3e-91 339.7 327 53.5
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 6.8e-91 338.2 335 51.0
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 6.8e-91 338.2 327 53.2
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 8.8e-91 337.8 329 52.6
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 8.8e-91 337.8 329 51.4
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 1.2e-90 337.4 343 51.0
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 1.2e-90 337.4 327 52.6
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 1.5e-90 337.0 330 53.9
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 1.5e-90 337.0 335 51.0
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 2.0e-90 336.7 332 50.9
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.6e-90 336.3 328 52.7
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 2.6e-90 336.3 337 50.7
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 4.4e-90 335.5 331 52.6
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 5.7e-90 335.1 316 52.8
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 7.5e-90 334.7 325 52.6
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 9.8e-90 334.3 335 51.9
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 2.2e-89 333.2 335 50.7
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 3.7e-89 332.4 309 53.7
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 3.7e-89 332.4 318 53.1
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 9.1e-88 327.8 336 51.8
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 1.2e-87 327.4 331 52.0
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 2.0e-87 326.6 330 50.6
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 2.9e-86 322.8 331 51.4
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 3.8e-86 322.4 330 51.2
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 3.8e-86 322.4 336 51.5
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 2.5e-85 319.7 332 47.9
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.5e-85 319.7 390 46.2
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 5.5e-85 318.5 309 53.7
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 3.0e-83 312.8 332 47.9
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 3.0e-83 312.8 232 65.5
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 4.0e-83 312.4 373 44.8
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 5.2e-83 312.0 279 58.4
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 1.5e-82 310.5 327 48.9
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 2.6e-82 309.7 351 46.4
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 7.5e-82 308.1 330 49.7
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 7.5e-82 308.1 335 49.0
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 1.7e-81 307.0 257 57.2
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 6.3e-81 305.1 332 46.7
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 5.9e-79 298.5 331 48.3
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 1.5e-77 293.9 339 44.8
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 2.5e-77 293.1 279 52.3
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 1.4e-75 287.3 325 49.2
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 1.4e-75 287.3 344 46.5
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 5.7e-74 282.0 313 45.4
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 6.4e-73 278.5 388 42.0
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 5.4e-72 275.4 261 50.6
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 6.6e-70 268.5 311 47.9
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 3.6e-68 262.7 203 63.5
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 4.7e-68 262.3 260 52.3
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 3.1e-67 259.6 261 51.0
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 9.5e-61 238.0 265 46.8
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 9.5e-61 238.0 257 49.0
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 1.1e-59 234.6 233 49.8
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 9.8e-58 228.0 275 45.5
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 1.6e-55 220.7 284 42.6
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 2.7e-55 219.9 249 47.8
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 1.5e-53 214.2 240 47.9
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 4.4e-50 202.6 328 36.3
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 1.3e-49 201.1 230 45.2
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 3.5e-47 193.0 404 32.4
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 1.6e-44 184.1 267 39.7
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 1.4e-43 181.0 370 34.3
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 8.9e-43 178.3 325 35.1
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 4.6e-39 166.0 255 39.2
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 1.1e-32 144.8 113 62.8
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 7.9e-31 138.7 139 52.5
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 1.3e-28 131.3 127 48.8
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 1.3e-28 131.3 102 60.8
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.6e-28 131.0 101 59.4
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 2.8e-28 130.2 107 61.7
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 5.5e-24 115.9 93 57.0
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 8.7e-22 108.6 126 42.9
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 2.8e-20 103.6 50 90.0
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 4.5e-18 96.3 85 52.9
SEGI_24854 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 2.2e-17 94.0 232 28.9
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.4e-16 91.3 50 78.0
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 4.2e-16 89.7 51 74.5
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 7.1e-16 89.0 50 74.0
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 6.3e-12 75.9 82 48.8
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 6.3e-12 75.9 82 48.8
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 3.1e-11 73.6 68 52.9
A02p14700 Brassica napus HOM05D005922 ORTHO05D006934 6.9e-11 72.4 175 29.7
BraA02t06537Z Brassica rapa HOM05D005922 ORTHO05D006934 6.9e-11 72.4 175 29.7
PRCOL_00005504 Prasinoderma coloniale HOM05D005922 ORTHO05D006934 1.9e-08 64.3 139 33.1
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea HOM05D002181 ORTHO05D003287 5.1e-06 56.2 40 57.5
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea HOM05D002181 ORTHO05D006934 5.1e-06 56.2 40 57.5


User provided reference genes

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