Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 2.0e-98 362.5 187 100.0
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 6.7e-70 267.7 217 67.7
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 4.4e-69 265.0 217 67.3
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 2.8e-68 262.3 217 67.7
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 2.4e-67 259.2 217 64.5
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 9.1e-67 257.3 221 65.2
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.7e-65 253.1 218 62.4
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 1.7e-65 253.1 221 65.6
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 5.5e-64 248.1 218 60.1
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 1.2e-63 246.9 218 61.5
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 4.7e-63 245.0 217 60.8
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 1.0e-62 243.8 219 62.6
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 1.8e-62 243.0 221 61.1
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 1.8e-62 243.0 217 61.8
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 3.0e-62 242.3 218 63.3
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 5.2e-62 241.5 220 63.2
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 2.0e-61 239.6 222 58.1
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 1.7e-60 236.5 221 59.7
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.1e-59 233.8 217 60.8
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 1.2e-58 230.3 217 59.0
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 2.0e-58 229.6 214 61.7
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 4.5e-58 228.4 218 58.7
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 5.9e-58 228.0 228 57.9
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 1.0e-57 227.3 218 61.0
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 5.0e-57 224.9 212 59.9
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 5.0e-57 224.9 214 60.7
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 8.5e-57 224.2 221 57.5
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 5.5e-56 221.5 207 62.3
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 2.1e-55 219.5 207 61.8
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 4.0e-54 215.3 218 56.4
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 8.8e-54 214.2 218 56.4
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 1.5e-53 213.4 218 56.0
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 2.0e-53 213.0 217 58.5
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 2.6e-53 212.6 218 57.8
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 3.4e-53 212.2 221 58.8
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 7.5e-53 211.1 213 54.9
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 9.8e-53 210.7 218 55.0
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 1.7e-52 209.9 213 54.5
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 2.2e-52 209.5 216 53.7
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 4.8e-52 208.4 216 53.2
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 6.3e-52 208.0 201 61.7
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 1.1e-51 207.2 218 53.2
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 1.4e-51 206.8 216 53.7
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 1.4e-51 206.8 230 56.1
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 2.4e-51 206.1 206 59.7
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 4.1e-51 205.3 221 54.8
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 5.4e-51 204.9 215 54.4
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 2.0e-50 203.0 232 54.3
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 4.5e-50 201.8 205 59.0
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 4.5e-50 201.8 220 53.6
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 4.5e-50 201.8 220 53.6
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 4.5e-50 201.8 220 53.6
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 5.9e-50 201.4 218 52.8
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 7.7e-50 201.1 216 55.1
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 7.7e-50 201.1 220 53.2
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 1.0e-49 200.7 229 52.8
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 1.3e-49 200.3 212 57.1
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 1.3e-49 200.3 222 54.1
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 1.7e-49 199.9 204 58.3
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 2.9e-49 199.1 223 52.5
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 2.9e-49 199.1 230 56.1
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 3.8e-49 198.7 220 53.6
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 1.1e-48 197.2 219 55.3
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 1.9e-48 196.4 209 55.5
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 1.9e-48 196.4 211 56.9
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 4.2e-48 195.3 220 54.5
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 4.2e-48 195.3 202 56.4
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 9.4e-48 194.1 203 56.7
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 1.6e-47 193.4 207 53.1
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 8.0e-47 191.0 216 51.4
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 4.0e-46 188.7 217 47.5
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 6.8e-46 188.0 220 52.3
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 8.8e-46 187.6 211 48.8
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 1.2e-45 187.2 212 52.4
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 3.4e-45 185.7 214 50.9
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 9.8e-45 184.1 208 52.4
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 2.8e-44 182.6 220 51.4
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.4e-43 180.3 137 69.3
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.4e-43 180.3 137 69.3
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 3.1e-43 179.1 186 55.9
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 4.1e-43 178.7 233 50.2
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 4.1e-43 178.7 217 47.5
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 7.0e-43 177.9 218 52.8
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 2.7e-42 176.0 137 68.6
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 2.7e-42 176.0 136 64.0
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.0e-41 174.1 226 51.8
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 3.8e-41 172.2 225 51.6
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.8e-41 172.2 225 51.6
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 8.6e-41 171.0 145 65.5
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 4.3e-40 168.7 225 50.2
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 3.6e-39 165.6 240 46.2
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.6e-39 165.6 219 50.2
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 6.1e-39 164.9 184 51.6
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 6.8e-38 161.4 231 45.0
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 2.2e-36 156.4 139 59.7
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 3.7e-36 155.6 134 61.2
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 4.9e-36 155.2 116 66.4
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.1e-35 154.1 180 47.2
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 3.2e-35 152.5 166 53.0
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 2.5e-32 142.9 223 39.5
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 2.8e-31 139.4 152 52.6
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 3.9e-25 119.0 115 47.8
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 1.6e-23 113.6 114 48.2
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 8.1e-23 111.3 65 83.1
Ciclev10006333m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.2e-13 80.9 67 68.7
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 4.9e-12 75.5 42 83.3
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 1.1e-11 74.3 46 82.6
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 4.1e-11 72.4 86 46.5
Aa31LG1G6410 Aethionema arabicum HOM05D007103 ORTHO05D008948 6.2e-07 58.5 59 57.6


User provided reference genes

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